EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000015916 (Gene tree)
Gene ID: 101564110
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 41600 bases
Position: chrJH651525.1:2056924-2098523
Accession: 101564110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021633	ResIII	PF04851.15	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021891	HELLS-201	2941	XM_004625489	ENSODEP00000021633	838 (aa)	XP_004625546	UPI000333E683

Gene Model

Click here to download ENSODEG00000015916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000015916	HELLS	51	35.845	ENSODEG00000015358	-	68	35.845
ENSODEG00000015916	HELLS	64	38.434	ENSODEG00000004334	SMARCAD1	51	38.434
ENSODEG00000015916	HELLS	64	46.591	ENSODEG00000012163	SMARCA1	50	46.591
ENSODEG00000015916	HELLS	64	38.095	ENSODEG00000002494	CHD1L	51	38.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015916	HELLS	100	90.334	ENSG00000119969	HELLS	100	91.737	Homo_sapiens
ENSODEG00000015916	HELLS	93	64.885	ENSAPOG00000007707	hells	99	62.811	Acanthochromis_polyacanthus
ENSODEG00000015916	HELLS	100	89.273	ENSAMEG00000013525	HELLS	100	89.511	Ailuropoda_melanoleuca
ENSODEG00000015916	HELLS	81	66.861	ENSACIG00000018996	hells	99	65.867	Amphilophus_citrinellus
ENSODEG00000015916	HELLS	94	63.671	ENSAOCG00000006348	hells	97	63.309	Amphiprion_ocellaris
ENSODEG00000015916	HELLS	94	63.544	ENSAPEG00000001422	hells	97	62.830	Amphiprion_percula
ENSODEG00000015916	HELLS	97	64.901	ENSATEG00000008107	hells	99	63.861	Anabas_testudineus
ENSODEG00000015916	HELLS	94	79.670	ENSAPLG00000002649	HELLS	99	79.670	Anas_platyrhynchos
ENSODEG00000015916	HELLS	86	74.028	ENSACAG00000028785	HELLS	96	74.028	Anolis_carolinensis
ENSODEG00000015916	HELLS	100	89.260	ENSANAG00000034765	-	100	90.000	Aotus_nancymaae
ENSODEG00000015916	HELLS	97	63.086	ENSACLG00000007613	hells	99	63.210	Astatotilapia_calliptera
ENSODEG00000015916	HELLS	82	65.942	ENSAMXG00000002088	hells	99	65.714	Astyanax_mexicanus
ENSODEG00000015916	HELLS	80	91.194	ENSBTAG00000005979	HELLS	99	91.194	Bos_taurus
ENSODEG00000015916	HELLS	100	89.141	ENSCJAG00000015819	HELLS	100	89.857	Callithrix_jacchus
ENSODEG00000015916	HELLS	100	89.154	ENSCAFG00000008090	HELLS	100	89.154	Canis_familiaris
ENSODEG00000015916	HELLS	94	90.343	ENSCAFG00020004809	HELLS	98	90.597	Canis_lupus_dingo
ENSODEG00000015916	HELLS	100	86.754	ENSCHIG00000019462	HELLS	100	86.754	Capra_hircus
ENSODEG00000015916	HELLS	98	88.564	ENSTSYG00000005811	-	99	89.769	Carlito_syrichta
ENSODEG00000015916	HELLS	100	93.079	ENSCPOG00000003043	HELLS	100	93.079	Cavia_porcellus
ENSODEG00000015916	HELLS	55	92.442	ENSCCAG00000026761	HELLS	96	92.442	Cebus_capucinus
ENSODEG00000015916	HELLS	100	85.294	ENSCATG00000033830	HELLS	100	91.457	Cercocebus_atys
ENSODEG00000015916	HELLS	100	93.914	ENSCLAG00000003938	HELLS	100	93.796	Chinchilla_lanigera
ENSODEG00000015916	HELLS	85	91.317	ENSCSAG00000006181	HELLS	100	91.317	Chlorocebus_sabaeus
ENSODEG00000015916	HELLS	85	80.447	ENSCPBG00000025739	HELLS	99	82.127	Chrysemys_picta_bellii
ENSODEG00000015916	HELLS	100	85.068	ENSCANG00000037736	HELLS	100	91.176	Colobus_angolensis_palliatus
ENSODEG00000015916	HELLS	100	85.613	ENSCGRG00001017410	Hells	100	85.645	Cricetulus_griseus_chok1gshd
ENSODEG00000015916	HELLS	96	60.552	ENSCSEG00000016985	hells	99	63.333	Cynoglossus_semilaevis
ENSODEG00000015916	HELLS	63	60.911	ENSCVAG00000000159	hells	97	61.049	Cyprinodon_variegatus
ENSODEG00000015916	HELLS	93	65.783	ENSDARG00000057738	hells	97	63.863	Danio_rerio
ENSODEG00000015916	HELLS	76	90.521	ENSDNOG00000017758	HELLS	100	90.521	Dasypus_novemcinctus
ENSODEG00000015916	HELLS	100	87.828	ENSDORG00000011812	Hells	100	87.828	Dipodomys_ordii
ENSODEG00000015916	HELLS	63	73.050	ENSEBUG00000016152	hells	88	73.050	Eptatretus_burgeri
ENSODEG00000015916	HELLS	100	89.988	ENSEASG00005011764	HELLS	100	89.988	Equus_asinus_asinus
ENSODEG00000015916	HELLS	100	89.976	ENSECAG00000018810	HELLS	100	89.976	Equus_caballus
ENSODEG00000015916	HELLS	81	93.478	ENSEEUG00000007680	HELLS	91	93.478	Erinaceus_europaeus
ENSODEG00000015916	HELLS	97	63.223	ENSELUG00000014909	hells	93	63.223	Esox_lucius
ENSODEG00000015916	HELLS	85	91.317	ENSFCAG00000005206	HELLS	100	91.317	Felis_catus
ENSODEG00000015916	HELLS	98	79.684	ENSFALG00000007136	HELLS	99	79.684	Ficedula_albicollis
ENSODEG00000015916	HELLS	98	91.119	ENSFDAG00000010042	HELLS	100	91.971	Fukomys_damarensis
ENSODEG00000015916	HELLS	99	61.456	ENSFHEG00000022950	hells	97	61.456	Fundulus_heteroclitus
ENSODEG00000015916	HELLS	99	76.492	ENSGALG00000005451	HELLS	100	81.116	Gallus_gallus
ENSODEG00000015916	HELLS	98	61.613	ENSGAFG00000001204	hells	96	61.613	Gambusia_affinis
ENSODEG00000015916	HELLS	99	61.198	ENSGACG00000003897	hells	97	61.198	Gasterosteus_aculeatus
ENSODEG00000015916	HELLS	85	80.420	ENSGAGG00000010269	HELLS	100	81.948	Gopherus_agassizii
ENSODEG00000015916	HELLS	100	85.680	ENSGGOG00000008103	HELLS	100	91.457	Gorilla_gorilla
ENSODEG00000015916	HELLS	97	64.039	ENSHBUG00000010270	hells	99	63.210	Haplochromis_burtoni
ENSODEG00000015916	HELLS	72	89.571	ENSHGLG00000006537	-	100	89.571	Heterocephalus_glaber_female
ENSODEG00000015916	HELLS	98	92.336	ENSHGLG00000011377	-	100	92.336	Heterocephalus_glaber_female
ENSODEG00000015916	HELLS	98	92.092	ENSHGLG00100017230	-	100	92.092	Heterocephalus_glaber_male
ENSODEG00000015916	HELLS	87	82.418	ENSHGLG00100001957	-	96	82.456	Heterocephalus_glaber_male
ENSODEG00000015916	HELLS	84	64.739	ENSHCOG00000001119	hells	96	64.739	Hippocampus_comes
ENSODEG00000015916	HELLS	99	62.738	ENSIPUG00000002634	HELLS	97	62.738	Ictalurus_punctatus
ENSODEG00000015916	HELLS	98	90.024	ENSSTOG00000021976	HELLS	100	90.024	Ictidomys_tridecemlineatus
ENSODEG00000015916	HELLS	97	84.172	ENSJJAG00000000865	Hells	99	84.172	Jaculus_jaculus
ENSODEG00000015916	HELLS	98	64.964	ENSKMAG00000017279	hells	95	65.328	Kryptolebias_marmoratus
ENSODEG00000015916	HELLS	99	63.899	ENSLBEG00000027807	hells	96	63.899	Labrus_bergylta
ENSODEG00000015916	HELLS	98	89.294	ENSLAFG00000007049	HELLS	100	89.294	Loxodonta_africana
ENSODEG00000015916	HELLS	100	89.976	ENSMFAG00000044053	HELLS	99	91.499	Macaca_fascicularis
ENSODEG00000015916	HELLS	100	82.579	ENSMMUG00000017255	HELLS	100	91.631	Macaca_mulatta
ENSODEG00000015916	HELLS	100	85.294	ENSMNEG00000042628	HELLS	100	91.457	Macaca_nemestrina
ENSODEG00000015916	HELLS	100	89.976	ENSMLEG00000041751	HELLS	99	91.499	Mandrillus_leucophaeus
ENSODEG00000015916	HELLS	93	63.520	ENSMAMG00000009850	hells	98	66.038	Mastacembelus_armatus
ENSODEG00000015916	HELLS	99	63.101	ENSMZEG00005018414	hells	99	63.210	Maylandia_zebra
ENSODEG00000015916	HELLS	95	78.882	ENSMGAG00000006818	HELLS	100	78.882	Meleagris_gallopavo
ENSODEG00000015916	HELLS	96	84.826	ENSMAUG00000021941	Hells	98	84.826	Mesocricetus_auratus
ENSODEG00000015916	HELLS	68	89.373	ENSMICG00000046554	-	95	89.373	Microcebus_murinus
ENSODEG00000015916	HELLS	98	85.158	ENSMOCG00000019342	Hells	100	85.158	Microtus_ochrogaster
ENSODEG00000015916	HELLS	97	58.931	ENSMMOG00000007950	hells	98	59.634	Mola_mola
ENSODEG00000015916	HELLS	96	81.716	ENSMODG00000005589	-	50	83.038	Monodelphis_domestica
ENSODEG00000015916	HELLS	97	61.111	ENSMALG00000010244	hells	94	60.988	Monopterus_albus
ENSODEG00000015916	HELLS	98	86.496	MGP_CAROLIEiJ_G0022930	Hells	100	86.496	Mus_caroli
ENSODEG00000015916	HELLS	98	86.253	ENSMUSG00000025001	Hells	100	86.253	Mus_musculus
ENSODEG00000015916	HELLS	98	87.226	MGP_PahariEiJ_G0014423	Hells	100	87.226	Mus_pahari
ENSODEG00000015916	HELLS	98	86.618	MGP_SPRETEiJ_G0023848	Hells	100	86.618	Mus_spretus
ENSODEG00000015916	HELLS	100	89.499	ENSMPUG00000017131	HELLS	100	89.499	Mustela_putorius_furo
ENSODEG00000015916	HELLS	100	87.589	ENSMLUG00000030511	HELLS	100	87.589	Myotis_lucifugus
ENSODEG00000015916	HELLS	100	87.589	ENSNGAG00000014049	Hells	100	87.589	Nannospalax_galili
ENSODEG00000015916	HELLS	97	60.222	ENSNBRG00000024242	hells	99	60.222	Neolamprologus_brichardi
ENSODEG00000015916	HELLS	100	85.181	ENSNLEG00000012987	HELLS	100	91.457	Nomascus_leucogenys
ENSODEG00000015916	HELLS	97	63.558	ENSONIG00000013166	hells	94	64.049	Oreochromis_niloticus
ENSODEG00000015916	HELLS	98	81.719	ENSOANG00000005139	HELLS	100	81.719	Ornithorhynchus_anatinus
ENSODEG00000015916	HELLS	100	89.379	ENSOCUG00000026731	HELLS	100	89.379	Oryctolagus_cuniculus
ENSODEG00000015916	HELLS	98	63.362	ENSORLG00000000987	hells	97	62.864	Oryzias_latipes
ENSODEG00000015916	HELLS	99	62.936	ENSORLG00020003952	hells	97	62.743	Oryzias_latipes_hni
ENSODEG00000015916	HELLS	97	64.128	ENSORLG00015010960	hells	96	63.547	Oryzias_latipes_hsok
ENSODEG00000015916	HELLS	97	63.171	ENSOMEG00000000135	hells	94	63.659	Oryzias_melastigma
ENSODEG00000015916	HELLS	99	88.889	ENSOGAG00000017145	HELLS	99	88.889	Otolemur_garnettii
ENSODEG00000015916	HELLS	100	89.618	ENSOARG00000004495	HELLS	100	89.618	Ovis_aries
ENSODEG00000015916	HELLS	100	85.680	ENSPPAG00000001726	HELLS	100	91.457	Pan_paniscus
ENSODEG00000015916	HELLS	85	91.176	ENSPPRG00000005839	HELLS	100	91.457	Panthera_pardus
ENSODEG00000015916	HELLS	100	89.379	ENSPTIG00000007647	HELLS	100	91.457	Panthera_tigris_altaica
ENSODEG00000015916	HELLS	100	85.680	ENSPTRG00000002778	HELLS	99	90.844	Pan_troglodytes
ENSODEG00000015916	HELLS	100	85.294	ENSPANG00000033528	HELLS	100	91.457	Papio_anubis
ENSODEG00000015916	HELLS	98	62.892	ENSPKIG00000010890	hells	98	62.056	Paramormyrops_kingsleyae
ENSODEG00000015916	HELLS	94	78.436	ENSPSIG00000005462	HELLS	100	78.815	Pelodiscus_sinensis
ENSODEG00000015916	HELLS	98	58.434	ENSPMGG00000014690	hells	99	64.470	Periophthalmus_magnuspinnatus
ENSODEG00000015916	HELLS	100	78.520	ENSPEMG00000017579	Hells	100	79.805	Peromyscus_maniculatus_bairdii
ENSODEG00000015916	HELLS	97	60.588	ENSPMAG00000004376	hells	98	60.588	Petromyzon_marinus
ENSODEG00000015916	HELLS	100	82.164	ENSPCIG00000013361	HELLS	100	82.164	Phascolarctos_cinereus
ENSODEG00000015916	HELLS	98	60.650	ENSPFOG00000001954	hells	96	61.492	Poecilia_formosa
ENSODEG00000015916	HELLS	98	60.529	ENSPLAG00000006504	hells	97	62.781	Poecilia_latipinna
ENSODEG00000015916	HELLS	98	60.650	ENSPMEG00000003024	hells	97	62.921	Poecilia_mexicana
ENSODEG00000015916	HELLS	98	60.529	ENSPREG00000020337	hells	96	61.372	Poecilia_reticulata
ENSODEG00000015916	HELLS	100	85.520	ENSPPYG00000002502	HELLS	100	85.520	Pongo_abelii
ENSODEG00000015916	HELLS	100	82.578	ENSPCAG00000013618	HELLS	100	82.578	Procavia_capensis
ENSODEG00000015916	HELLS	100	86.423	ENSPCOG00000023985	HELLS	100	90.438	Propithecus_coquereli
ENSODEG00000015916	HELLS	92	92.818	ENSPVAG00000017899	HELLS	92	92.818	Pteropus_vampyrus
ENSODEG00000015916	HELLS	97	62.052	ENSPNYG00000009100	hells	99	62.052	Pundamilia_nyererei
ENSODEG00000015916	HELLS	97	62.285	ENSPNAG00000029968	hells	99	62.285	Pygocentrus_nattereri
ENSODEG00000015916	HELLS	100	86.754	ENSRNOG00000047692	LOC100911660	100	86.861	Rattus_norvegicus
ENSODEG00000015916	HELLS	100	86.754	ENSRNOG00000047104	Hells	100	86.754	Rattus_norvegicus
ENSODEG00000015916	HELLS	100	84.205	ENSRBIG00000041080	HELLS	100	90.188	Rhinopithecus_bieti
ENSODEG00000015916	HELLS	100	85.698	ENSRROG00000040169	HELLS	100	91.317	Rhinopithecus_roxellana
ENSODEG00000015916	HELLS	98	82.282	ENSSHAG00000014358	HELLS	100	81.376	Sarcophilus_harrisii
ENSODEG00000015916	HELLS	95	66.667	ENSSFOG00015017895	hells	99	65.343	Scleropages_formosus
ENSODEG00000015916	HELLS	98	63.494	ENSSMAG00000017423	hells	99	62.485	Scophthalmus_maximus
ENSODEG00000015916	HELLS	97	64.532	ENSSDUG00000016924	hells	99	63.119	Seriola_dumerili
ENSODEG00000015916	HELLS	97	62.639	ENSSLDG00000018960	hells	94	62.639	Seriola_lalandi_dorsalis
ENSODEG00000015916	HELLS	98	77.521	ENSSPUG00000017425	HELLS	100	79.193	Sphenodon_punctatus
ENSODEG00000015916	HELLS	96	63.400	ENSSPAG00000015579	hells	99	65.022	Stegastes_partitus
ENSODEG00000015916	HELLS	100	89.857	ENSSSCG00000010486	HELLS	100	89.857	Sus_scrofa
ENSODEG00000015916	HELLS	99	79.493	ENSTGUG00000007157	HELLS	99	79.493	Taeniopygia_guttata
ENSODEG00000015916	HELLS	99	63.669	ENSTRUG00000000350	hells	97	64.149	Takifugu_rubripes
ENSODEG00000015916	HELLS	98	54.976	ENSTNIG00000003738	hells	99	56.204	Tetraodon_nigroviridis
ENSODEG00000015916	HELLS	98	89.294	ENSUAMG00000003343	HELLS	100	89.294	Ursus_americanus
ENSODEG00000015916	HELLS	99	89.372	ENSUMAG00000004748	HELLS	98	91.362	Ursus_maritimus
ENSODEG00000015916	HELLS	100	88.067	ENSVPAG00000010115	HELLS	100	88.305	Vicugna_pacos
ENSODEG00000015916	HELLS	100	89.379	ENSVVUG00000022808	HELLS	100	89.618	Vulpes_vulpes
ENSODEG00000015916	HELLS	98	61.239	ENSXCOG00000013840	hells	98	61.239	Xiphophorus_couchianus
ENSODEG00000015916	HELLS	99	61.011	ENSXMAG00000005731	hells	97	63.380	Xiphophorus_maculatus