EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000015958 (Gene tree)
Gene ID: 101562163
Gene Symbol: LARP6
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 22066 bases
Position: chrJH651541.1:6335793-6357858
Accession: 101562163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021697	La	PF05383.17	1.8e-20	1	1
ENSODEP00000021696	La	PF05383.17	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021956	LARP6-202	1458	XM_004628914	ENSODEP00000021697	485 (aa)	XP_004628971	UPI000333A74F
ENSODET00000021955	LARP6-201	1470	-	ENSODEP00000021696	489 (aa)	-	-

Gene Model

Click here to download ENSODEG00000015958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015958	LARP6	100	87.627	ENSG00000166173	LARP6	100	90.323	Homo_sapiens
ENSODEG00000015958	LARP6	95	56.276	ENSAPOG00000021773	larp6a	67	56.276	Acanthochromis_polyacanthus
ENSODEG00000015958	LARP6	86	88.443	ENSAMEG00000008897	LARP6	99	88.652	Ailuropoda_melanoleuca
ENSODEG00000015958	LARP6	95	57.531	ENSACIG00000005166	larp6a	91	57.113	Amphilophus_citrinellus
ENSODEG00000015958	LARP6	95	56.276	ENSAOCG00000002284	larp6a	67	56.276	Amphiprion_ocellaris
ENSODEG00000015958	LARP6	95	56.276	ENSAPEG00000008077	larp6a	89	56.276	Amphiprion_percula
ENSODEG00000015958	LARP6	95	56.875	ENSATEG00000004018	larp6a	66	55.833	Anabas_testudineus
ENSODEG00000015958	LARP6	85	69.976	ENSAPLG00000009914	LARP6	99	69.976	Anas_platyrhynchos
ENSODEG00000015958	LARP6	84	68.780	ENSACAG00000008613	LARP6	98	66.106	Anolis_carolinensis
ENSODEG00000015958	LARP6	100	88.235	ENSANAG00000024860	LARP6	100	88.235	Aotus_nancymaae
ENSODEG00000015958	LARP6	95	57.500	ENSACLG00000018561	larp6a	65	56.250	Astatotilapia_calliptera
ENSODEG00000015958	LARP6	95	55.328	ENSAMXG00000029387	larp6a	67	57.273	Astyanax_mexicanus
ENSODEG00000015958	LARP6	83	41.446	ENSAMXG00000036816	-	93	40.887	Astyanax_mexicanus
ENSODEG00000015958	LARP6	100	86.207	ENSBTAG00000003915	LARP6	100	86.207	Bos_taurus
ENSODEG00000015958	LARP6	100	87.627	ENSCJAG00000046236	-	100	87.627	Callithrix_jacchus
ENSODEG00000015958	LARP6	100	88.032	ENSCJAG00000018642	-	100	88.032	Callithrix_jacchus
ENSODEG00000015958	LARP6	86	89.623	ENSCAFG00000017616	LARP6	99	89.623	Canis_familiaris
ENSODEG00000015958	LARP6	100	86.207	ENSCAFG00020007296	LARP6	100	86.613	Canis_lupus_dingo
ENSODEG00000015958	LARP6	100	85.801	ENSCHIG00000013742	LARP6	100	85.801	Capra_hircus
ENSODEG00000015958	LARP6	86	87.972	ENSTSYG00000028124	LARP6	87	87.972	Carlito_syrichta
ENSODEG00000015958	LARP6	86	90.353	ENSCAPG00000015452	LARP6	100	90.353	Cavia_aperea
ENSODEG00000015958	LARP6	100	89.634	ENSCPOG00000022687	LARP6	100	89.634	Cavia_porcellus
ENSODEG00000015958	LARP6	100	87.830	ENSCCAG00000036320	LARP6	100	87.830	Cebus_capucinus
ENSODEG00000015958	LARP6	100	88.032	ENSCATG00000042432	LARP6	100	88.032	Cercocebus_atys
ENSODEG00000015958	LARP6	100	91.886	ENSCLAG00000007893	LARP6	100	91.886	Chinchilla_lanigera
ENSODEG00000015958	LARP6	100	88.032	ENSCSAG00000013672	LARP6	100	88.032	Chlorocebus_sabaeus
ENSODEG00000015958	LARP6	96	88.372	ENSCHOG00000003318	LARP6	99	88.372	Choloepus_hoffmanni
ENSODEG00000015958	LARP6	88	69.816	ENSCPBG00000010771	LARP6	84	69.816	Chrysemys_picta_bellii
ENSODEG00000015958	LARP6	86	89.623	ENSCANG00000025833	LARP6	99	89.835	Colobus_angolensis_palliatus
ENSODEG00000015958	LARP6	99	86.762	ENSCGRG00001024472	Larp6	99	86.762	Cricetulus_griseus_chok1gshd
ENSODEG00000015958	LARP6	99	86.762	ENSCGRG00000004527	Larp6	99	86.762	Cricetulus_griseus_crigri
ENSODEG00000015958	LARP6	95	57.083	ENSCSEG00000011196	larp6a	65	58.409	Cynoglossus_semilaevis
ENSODEG00000015958	LARP6	95	57.203	ENSCVAG00000009605	larp6a	69	56.965	Cyprinodon_variegatus
ENSODEG00000015958	LARP6	87	56.916	ENSDARG00000005355	larp6a	96	58.711	Danio_rerio
ENSODEG00000015958	LARP6	100	87.195	ENSDNOG00000042993	LARP6	100	87.398	Dasypus_novemcinctus
ENSODEG00000015958	LARP6	100	77.172	ENSDORG00000023910	Larp6	100	76.970	Dipodomys_ordii
ENSODEG00000015958	LARP6	79	87.200	ENSETEG00000020390	LARP6	79	84.791	Echinops_telfairi
ENSODEG00000015958	LARP6	100	88.438	ENSEASG00005005490	LARP6	73	88.438	Equus_asinus_asinus
ENSODEG00000015958	LARP6	100	88.235	ENSECAG00000014190	LARP6	100	88.235	Equus_caballus
ENSODEG00000015958	LARP6	87	57.500	ENSELUG00000007341	larp6a	64	57.045	Esox_lucius
ENSODEG00000015958	LARP6	100	88.032	ENSFCAG00000001361	LARP6	100	88.032	Felis_catus
ENSODEG00000015958	LARP6	88	68.636	ENSFALG00000012389	LARP6	99	65.000	Ficedula_albicollis
ENSODEG00000015958	LARP6	94	86.266	ENSFDAG00000019994	LARP6	89	87.500	Fukomys_damarensis
ENSODEG00000015958	LARP6	95	57.203	ENSFHEG00000010312	larp6a	67	56.341	Fundulus_heteroclitus
ENSODEG00000015958	LARP6	88	69.565	ENSGALG00000004046	LARP6	89	69.318	Gallus_gallus
ENSODEG00000015958	LARP6	95	57.173	ENSGAFG00000009426	larp6a	65	59.184	Gambusia_affinis
ENSODEG00000015958	LARP6	85	58.661	ENSGACG00000014622	larp6a	97	57.737	Gasterosteus_aculeatus
ENSODEG00000015958	LARP6	80	70.127	ENSGAGG00000010802	LARP6	58	70.127	Gopherus_agassizii
ENSODEG00000015958	LARP6	86	89.623	ENSGGOG00000024151	LARP6	99	89.835	Gorilla_gorilla
ENSODEG00000015958	LARP6	95	57.500	ENSHBUG00000021014	larp6a	65	56.033	Haplochromis_burtoni
ENSODEG00000015958	LARP6	100	89.697	ENSHGLG00000015112	LARP6	100	89.697	Heterocephalus_glaber_female
ENSODEG00000015958	LARP6	86	91.745	ENSHGLG00100013159	LARP6	99	91.962	Heterocephalus_glaber_male
ENSODEG00000015958	LARP6	95	55.350	ENSHCOG00000001241	larp6a	84	57.437	Hippocampus_comes
ENSODEG00000015958	LARP6	85	57.044	ENSIPUG00000010187	larp6	65	59.294	Ictalurus_punctatus
ENSODEG00000015958	LARP6	85	39.070	ENSIPUG00000002828	-	96	36.052	Ictalurus_punctatus
ENSODEG00000015958	LARP6	93	90.239	ENSSTOG00000024279	LARP6	99	90.570	Ictidomys_tridecemlineatus
ENSODEG00000015958	LARP6	100	84.350	ENSJJAG00000011013	Larp6	100	84.553	Jaculus_jaculus
ENSODEG00000015958	LARP6	95	57.083	ENSKMAG00000001702	larp6a	60	59.091	Kryptolebias_marmoratus
ENSODEG00000015958	LARP6	95	55.000	ENSLBEG00000000170	larp6a	89	54.583	Labrus_bergylta
ENSODEG00000015958	LARP6	96	63.057	ENSLACG00000018706	LARP6	89	61.146	Latimeria_chalumnae
ENSODEG00000015958	LARP6	86	39.408	ENSLACG00000002786	-	96	43.333	Latimeria_chalumnae
ENSODEG00000015958	LARP6	95	58.996	ENSLOCG00000014592	larp6a	65	61.416	Lepisosteus_oculatus
ENSODEG00000015958	LARP6	84	44.471	ENSLOCG00000008547	-	82	42.689	Lepisosteus_oculatus
ENSODEG00000015958	LARP6	90	89.238	ENSLAFG00000016343	LARP6	99	89.238	Loxodonta_africana
ENSODEG00000015958	LARP6	91	89.556	ENSMFAG00000035507	LARP6	100	89.556	Macaca_fascicularis
ENSODEG00000015958	LARP6	100	86.004	ENSMMUG00000004429	LARP6	98	88.000	Macaca_mulatta
ENSODEG00000015958	LARP6	100	87.830	ENSMNEG00000045335	LARP6	100	87.830	Macaca_nemestrina
ENSODEG00000015958	LARP6	86	89.623	ENSMLEG00000038587	LARP6	99	89.835	Mandrillus_leucophaeus
ENSODEG00000015958	LARP6	95	56.875	ENSMAMG00000005261	larp6a	66	55.833	Mastacembelus_armatus
ENSODEG00000015958	LARP6	95	57.500	ENSMZEG00005005774	larp6a	65	56.250	Maylandia_zebra
ENSODEG00000015958	LARP6	85	70.379	ENSMGAG00000005077	LARP6	99	70.379	Meleagris_gallopavo
ENSODEG00000015958	LARP6	99	86.558	ENSMAUG00000018486	Larp6	99	86.558	Mesocricetus_auratus
ENSODEG00000015958	LARP6	100	86.382	ENSMICG00000011234	LARP6	100	86.382	Microcebus_murinus
ENSODEG00000015958	LARP6	100	85.598	ENSMOCG00000010492	Larp6	100	85.598	Microtus_ochrogaster
ENSODEG00000015958	LARP6	95	56.813	ENSMMOG00000016284	larp6a	91	56.813	Mola_mola
ENSODEG00000015958	LARP6	98	73.006	ENSMODG00000009034	LARP6	95	73.824	Monodelphis_domestica
ENSODEG00000015958	LARP6	95	56.250	ENSMALG00000014439	larp6a	84	58.182	Monopterus_albus
ENSODEG00000015958	LARP6	99	87.680	MGP_CAROLIEiJ_G0032314	Larp6	99	87.680	Mus_caroli
ENSODEG00000015958	LARP6	100	87.424	ENSMUSG00000034839	Larp6	100	87.424	Mus_musculus
ENSODEG00000015958	LARP6	100	86.410	MGP_PahariEiJ_G0015180	Larp6	100	86.410	Mus_pahari
ENSODEG00000015958	LARP6	100	86.815	MGP_SPRETEiJ_G0033452	Larp6	100	86.815	Mus_spretus
ENSODEG00000015958	LARP6	86	89.623	ENSMPUG00000017086	LARP6	99	89.623	Mustela_putorius_furo
ENSODEG00000015958	LARP6	100	87.830	ENSMLUG00000010319	LARP6	100	87.830	Myotis_lucifugus
ENSODEG00000015958	LARP6	100	86.004	ENSNGAG00000014238	Larp6	100	86.004	Nannospalax_galili
ENSODEG00000015958	LARP6	95	57.292	ENSNBRG00000008120	larp6a	90	56.458	Neolamprologus_brichardi
ENSODEG00000015958	LARP6	100	87.221	ENSNLEG00000013691	LARP6	100	86.613	Nomascus_leucogenys
ENSODEG00000015958	LARP6	84	75.358	ENSMEUG00000002270	LARP6	85	74.785	Notamacropus_eugenii
ENSODEG00000015958	LARP6	71	77.493	ENSOPRG00000004868	-	99	77.493	Ochotona_princeps
ENSODEG00000015958	LARP6	95	57.796	ENSONIG00000002901	larp6a	85	58.797	Oreochromis_niloticus
ENSODEG00000015958	LARP6	86	81.235	ENSOCUG00000009306	LARP6	100	81.235	Oryctolagus_cuniculus
ENSODEG00000015958	LARP6	95	56.904	ENSORLG00000014256	larp6a	92	56.904	Oryzias_latipes
ENSODEG00000015958	LARP6	95	56.904	ENSORLG00020019657	larp6a	63	59.039	Oryzias_latipes_hni
ENSODEG00000015958	LARP6	95	56.695	ENSORLG00015017915	larp6a	63	58.810	Oryzias_latipes_hsok
ENSODEG00000015958	LARP6	95	57.322	ENSOMEG00000017049	larp6a	63	59.497	Oryzias_melastigma
ENSODEG00000015958	LARP6	100	85.193	ENSOGAG00000000522	LARP6	100	85.598	Otolemur_garnettii
ENSODEG00000015958	LARP6	87	86.977	ENSOARG00000018750	LARP6	99	86.977	Ovis_aries
ENSODEG00000015958	LARP6	86	89.623	ENSPPAG00000031247	LARP6	99	89.835	Pan_paniscus
ENSODEG00000015958	LARP6	100	87.830	ENSPPRG00000011282	LARP6	100	87.830	Panthera_pardus
ENSODEG00000015958	LARP6	86	90.094	ENSPTIG00000015318	LARP6	86	90.307	Panthera_tigris_altaica
ENSODEG00000015958	LARP6	100	87.627	ENSPTRG00000007234	LARP6	100	87.627	Pan_troglodytes
ENSODEG00000015958	LARP6	100	87.830	ENSPANG00000016362	LARP6	100	87.830	Papio_anubis
ENSODEG00000015958	LARP6	95	57.983	ENSPKIG00000020103	larp6a	83	59.725	Paramormyrops_kingsleyae
ENSODEG00000015958	LARP6	95	56.495	ENSPKIG00000004511	LARP6	65	58.520	Paramormyrops_kingsleyae
ENSODEG00000015958	LARP6	61	82.692	ENSPSIG00000009071	LARP6	90	74.167	Pelodiscus_sinensis
ENSODEG00000015958	LARP6	95	57.708	ENSPMGG00000006958	larp6a	86	58.864	Periophthalmus_magnuspinnatus
ENSODEG00000015958	LARP6	99	86.558	ENSPEMG00000012909	Larp6	99	86.558	Peromyscus_maniculatus_bairdii
ENSODEG00000015958	LARP6	98	74.082	ENSPCIG00000020765	LARP6	95	74.694	Phascolarctos_cinereus
ENSODEG00000015958	LARP6	95	57.708	ENSPFOG00000014175	larp6a	90	57.884	Poecilia_formosa
ENSODEG00000015958	LARP6	95	57.411	ENSPLAG00000011105	larp6a	66	57.588	Poecilia_latipinna
ENSODEG00000015958	LARP6	95	57.620	ENSPMEG00000011085	larp6a	67	57.796	Poecilia_mexicana
ENSODEG00000015958	LARP6	95	57.292	ENSPREG00000008067	larp6a	63	59.410	Poecilia_reticulata
ENSODEG00000015958	LARP6	100	87.830	ENSPPYG00000006604	LARP6	100	87.830	Pongo_abelii
ENSODEG00000015958	LARP6	64	89.820	ENSPCAG00000014197	LARP6	76	90.303	Procavia_capensis
ENSODEG00000015958	LARP6	100	87.018	ENSPCOG00000022934	LARP6	100	87.018	Propithecus_coquereli
ENSODEG00000015958	LARP6	100	88.032	ENSPVAG00000005618	LARP6	100	88.032	Pteropus_vampyrus
ENSODEG00000015958	LARP6	95	57.292	ENSPNYG00000009835	larp6a	90	56.875	Pundamilia_nyererei
ENSODEG00000015958	LARP6	87	56.818	ENSPNAG00000017966	larp6a	72	57.500	Pygocentrus_nattereri
ENSODEG00000015958	LARP6	100	87.221	ENSRNOG00000012438	Larp6	100	87.221	Rattus_norvegicus
ENSODEG00000015958	LARP6	98	85.979	ENSRBIG00000032902	LARP6	98	85.979	Rhinopithecus_bieti
ENSODEG00000015958	LARP6	99	87.755	ENSRROG00000043074	LARP6	99	88.247	Rhinopithecus_roxellana
ENSODEG00000015958	LARP6	86	89.623	ENSSBOG00000024190	LARP6	99	89.835	Saimiri_boliviensis_boliviensis
ENSODEG00000015958	LARP6	85	75.663	ENSSHAG00000018495	LARP6	98	75.845	Sarcophilus_harrisii
ENSODEG00000015958	LARP6	95	51.820	ENSSFOG00015002254	LARP6	83	54.333	Scleropages_formosus
ENSODEG00000015958	LARP6	85	60.377	ENSSFOG00015023268	larp6a	87	59.545	Scleropages_formosus
ENSODEG00000015958	LARP6	95	57.173	ENSSMAG00000009953	larp6a	66	56.965	Scophthalmus_maximus
ENSODEG00000015958	LARP6	95	57.764	ENSSDUG00000007438	larp6a	66	57.143	Seriola_dumerili
ENSODEG00000015958	LARP6	95	57.764	ENSSLDG00000016647	larp6a	66	56.729	Seriola_lalandi_dorsalis
ENSODEG00000015958	LARP6	86	69.431	ENSSPUG00000011312	LARP6	99	69.431	Sphenodon_punctatus
ENSODEG00000015958	LARP6	95	56.276	ENSSPAG00000020502	larp6a	66	56.276	Stegastes_partitus
ENSODEG00000015958	LARP6	100	86.613	ENSSSCG00000004974	LARP6	100	86.613	Sus_scrofa
ENSODEG00000015958	LARP6	85	69.431	ENSTGUG00000005808	LARP6	99	69.431	Taeniopygia_guttata
ENSODEG00000015958	LARP6	95	56.904	ENSTRUG00000003151	larp6a	65	58.730	Takifugu_rubripes
ENSODEG00000015958	LARP6	95	56.009	ENSTNIG00000011926	larp6a	88	56.782	Tetraodon_nigroviridis
ENSODEG00000015958	LARP6	86	87.234	ENSTBEG00000015077	LARP6	99	87.234	Tupaia_belangeri
ENSODEG00000015958	LARP6	87	87.037	ENSUAMG00000010467	LARP6	87	87.037	Ursus_americanus
ENSODEG00000015958	LARP6	87	88.605	ENSVVUG00000015227	LARP6	98	87.443	Vulpes_vulpes
ENSODEG00000015958	LARP6	96	65.672	ENSXETG00000020340	larp6	87	67.599	Xenopus_tropicalis
ENSODEG00000015958	LARP6	95	57.203	ENSXCOG00000012654	larp6a	94	57.380	Xiphophorus_couchianus
ENSODEG00000015958	LARP6	95	57.203	ENSXMAG00000021015	larp6a	64	56.965	Xiphophorus_maculatus