EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000015976 (Gene tree)
Gene ID: 101566199
Gene Symbol: -
Alias: -
Full Name: survival of motor neuron protein-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 8882 bases
Position: chrJH651516.1:22763087-22771968
Accession: 101566199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021724	TUDOR	PF00567.24	2.1e-06	1	1
ENSODEP00000021726	TUDOR	PF00567.24	2.1e-06	1	1
ENSODEP00000021725	TUDOR	PF00567.24	2.3e-06	1	1
ENSODEP00000021725	SMN	PF06003.12	1.5e-98	1	1
ENSODEP00000021724	SMN	PF06003.12	1.4e-97	1	1
ENSODEP00000021726	SMN	PF06003.12	1.4e-97	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000021983	-	846	-	ENSODEP00000021724	281 (aa)	-	-
ENSODET00000021984	-	879	XM_012513003	ENSODEP00000021725	292 (aa)	XP_012368457	-
ENSODET00000021985	-	849	-	ENSODEP00000021726	282 (aa)	-	-

Gene Model

Click here to download ENSODEG00000015976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015976's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015976	-	97	79.930	ENSG00000205571	SMN2	99	79.930	Homo_sapiens
ENSODEG00000015976	-	97	79.930	ENSG00000172062	SMN1	99	79.930	Homo_sapiens
ENSODEG00000015976	-	91	54.307	ENSAPOG00000011324	smn1	91	52.830	Acanthochromis_polyacanthus
ENSODEG00000015976	-	94	84.644	ENSAMEG00000003316	-	91	84.000	Ailuropoda_melanoleuca
ENSODEG00000015976	-	91	49.814	ENSACIG00000019772	-	97	49.425	Amphilophus_citrinellus
ENSODEG00000015976	-	91	53.676	ENSAOCG00000024444	smn1	91	54.275	Amphiprion_ocellaris
ENSODEG00000015976	-	91	55.390	ENSAPEG00000016504	smn1	91	54.647	Amphiprion_percula
ENSODEG00000015976	-	92	55.351	ENSATEG00000002182	smn1	80	53.160	Anabas_testudineus
ENSODEG00000015976	-	67	57.143	ENSAPLG00000010912	-	91	57.143	Anas_platyrhynchos
ENSODEG00000015976	-	91	57.463	ENSACAG00000010017	-	89	58.736	Anolis_carolinensis
ENSODEG00000015976	-	97	78.495	ENSANAG00000032133	-	95	78.322	Aotus_nancymaae
ENSODEG00000015976	-	92	52.190	ENSACLG00000007308	smn1	88	53.257	Astatotilapia_calliptera
ENSODEG00000015976	-	97	80.727	ENSBTAG00000005743	SMN2	94	80.882	Bos_taurus
ENSODEG00000015976	-	88	31.818	WBGene00004887	smn-1	70	34.969	Caenorhabditis_elegans
ENSODEG00000015976	-	97	80.702	ENSCJAG00000016290	-	95	80.702	Callithrix_jacchus
ENSODEG00000015976	-	97	81.818	ENSCAFG00000007812	SMN	95	81.818	Canis_familiaris
ENSODEG00000015976	-	97	81.818	ENSCAFG00020019229	-	88	81.818	Canis_lupus_dingo
ENSODEG00000015976	-	94	81.413	ENSCHIG00000015559	-	93	80.505	Capra_hircus
ENSODEG00000015976	-	97	82.545	ENSTSYG00000012058	-	95	82.545	Carlito_syrichta
ENSODEG00000015976	-	78	79.295	ENSCAPG00000011021	-	100	80.176	Cavia_aperea
ENSODEG00000015976	-	97	91.606	ENSCPOG00000036973	-	94	90.876	Cavia_porcellus
ENSODEG00000015976	-	97	92.632	ENSCPOG00000012328	-	95	92.199	Cavia_porcellus
ENSODEG00000015976	-	97	80.212	ENSCCAG00000018127	-	95	80.212	Cebus_capucinus
ENSODEG00000015976	-	97	80.986	ENSCATG00000037002	-	99	80.986	Cercocebus_atys
ENSODEG00000015976	-	97	90.106	ENSCLAG00000000284	-	95	90.106	Chinchilla_lanigera
ENSODEG00000015976	-	97	81.338	ENSCSAG00000015688	-	95	81.338	Chlorocebus_sabaeus
ENSODEG00000015976	-	88	71.825	ENSCHOG00000007346	-	64	81.481	Choloepus_hoffmanni
ENSODEG00000015976	-	92	63.118	ENSCPBG00000010968	-	93	62.846	Chrysemys_picta_bellii
ENSODEG00000015976	-	97	81.272	ENSCANG00000038242	-	100	81.272	Colobus_angolensis_palliatus
ENSODEG00000015976	-	97	75.540	ENSCANG00000033324	-	94	76.173	Colobus_angolensis_palliatus
ENSODEG00000015976	-	97	79.273	ENSCGRG00001017959	-	95	79.273	Cricetulus_griseus_chok1gshd
ENSODEG00000015976	-	97	61.765	ENSCGRG00001016998	-	94	62.500	Cricetulus_griseus_chok1gshd
ENSODEG00000015976	-	97	79.273	ENSCGRG00000007698	Smn1	95	79.273	Cricetulus_griseus_crigri
ENSODEG00000015976	-	92	48.201	ENSCSEG00000015227	smn1	54	59.494	Cynoglossus_semilaevis
ENSODEG00000015976	-	92	53.558	ENSCVAG00000007498	smn1	92	51.321	Cyprinodon_variegatus
ENSODEG00000015976	-	95	46.690	ENSDARG00000018494	smn1	91	51.894	Danio_rerio
ENSODEG00000015976	-	80	81.498	ENSDNOG00000007283	-	94	81.498	Dasypus_novemcinctus
ENSODEG00000015976	-	79	68.919	ENSDNOG00000045949	-	76	69.832	Dasypus_novemcinctus
ENSODEG00000015976	-	97	73.646	ENSDORG00000007082	Smn1	97	73.646	Dipodomys_ordii
ENSODEG00000015976	-	73	67.150	ENSETEG00000001406	-	89	65.946	Echinops_telfairi
ENSODEG00000015976	-	93	38.644	ENSEBUG00000011902	smn1	53	45.806	Eptatretus_burgeri
ENSODEG00000015976	-	91	76.245	ENSEASG00005018000	-	89	78.175	Equus_asinus_asinus
ENSODEG00000015976	-	97	81.159	ENSECAG00000015215	-	95	81.522	Equus_caballus
ENSODEG00000015976	-	88	74.900	ENSEEUG00000015777	-	100	69.721	Erinaceus_europaeus
ENSODEG00000015976	-	91	56.089	ENSELUG00000018067	smn1	91	53.435	Esox_lucius
ENSODEG00000015976	-	97	82.609	ENSFCAG00000028292	SMN	95	82.545	Felis_catus
ENSODEG00000015976	-	89	60.236	ENSFALG00000012320	-	88	58.268	Ficedula_albicollis
ENSODEG00000015976	-	97	87.279	ENSFDAG00000017683	-	95	87.279	Fukomys_damarensis
ENSODEG00000015976	-	62	53.297	ENSFHEG00000018508	smn1	93	50.566	Fundulus_heteroclitus
ENSODEG00000015976	-	95	49.259	ENSGMOG00000017279	smn1	92	45.848	Gadus_morhua
ENSODEG00000015976	-	91	59.542	ENSGALG00000002430	SMN	92	56.250	Gallus_gallus
ENSODEG00000015976	-	90	51.111	ENSGAFG00000009501	smn1	91	51.894	Gambusia_affinis
ENSODEG00000015976	-	91	54.104	ENSGACG00000010584	smn1	88	52.692	Gasterosteus_aculeatus
ENSODEG00000015976	-	94	35.556	ENSGAGG00000013639	-	54	53.333	Gopherus_agassizii
ENSODEG00000015976	-	92	61.977	ENSGAGG00000011374	-	93	59.273	Gopherus_agassizii
ENSODEG00000015976	-	68	77.500	ENSGGOG00000026704	-	88	78.238	Gorilla_gorilla
ENSODEG00000015976	-	97	67.845	ENSGGOG00000003872	-	76	78.238	Gorilla_gorilla
ENSODEG00000015976	-	91	54.104	ENSHBUG00000013987	smn1	91	53.077	Haplochromis_burtoni
ENSODEG00000015976	-	97	84.982	ENSHGLG00000001905	-	94	84.982	Heterocephalus_glaber_female
ENSODEG00000015976	-	97	86.572	ENSHGLG00000001018	-	95	86.572	Heterocephalus_glaber_female
ENSODEG00000015976	-	97	86.572	ENSHGLG00100011252	-	95	86.572	Heterocephalus_glaber_male
ENSODEG00000015976	-	97	84.982	ENSHGLG00100018676	-	98	84.982	Heterocephalus_glaber_male
ENSODEG00000015976	-	92	52.963	ENSHCOG00000017136	smn1	87	48.699	Hippocampus_comes
ENSODEG00000015976	-	91	49.466	ENSIPUG00000012580	smn1	81	51.527	Ictalurus_punctatus
ENSODEG00000015976	-	97	83.039	ENSSTOG00000012288	-	100	84.173	Ictidomys_tridecemlineatus
ENSODEG00000015976	-	61	64.912	ENSJJAG00000014853	-	85	64.458	Jaculus_jaculus
ENSODEG00000015976	-	91	53.506	ENSKMAG00000007239	smn1	93	51.181	Kryptolebias_marmoratus
ENSODEG00000015976	-	91	53.704	ENSLBEG00000022550	smn1	91	53.788	Labrus_bergylta
ENSODEG00000015976	-	93	34.892	ENSLACG00000009808	-	93	37.282	Latimeria_chalumnae
ENSODEG00000015976	-	95	31.900	ENSLOCG00000000801	-	90	31.159	Lepisosteus_oculatus
ENSODEG00000015976	-	91	50.943	ENSLOCG00000011339	smn1	91	52.830	Lepisosteus_oculatus
ENSODEG00000015976	-	97	81.362	ENSLAFG00000003425	-	91	81.362	Loxodonta_africana
ENSODEG00000015976	-	97	81.690	ENSMFAG00000031523	SMN1	99	81.690	Macaca_fascicularis
ENSODEG00000015976	-	97	76.408	ENSMFAG00000008812	-	95	76.408	Macaca_fascicularis
ENSODEG00000015976	-	97	75.704	ENSMMUG00000030594	-	95	75.704	Macaca_mulatta
ENSODEG00000015976	-	97	81.690	ENSMMUG00000020214	SMN1	99	81.690	Macaca_mulatta
ENSODEG00000015976	-	97	81.690	ENSMNEG00000035094	-	99	81.690	Macaca_nemestrina
ENSODEG00000015976	-	74	68.750	ENSMNEG00000036423	-	81	68.750	Macaca_nemestrina
ENSODEG00000015976	-	97	81.690	ENSMLEG00000041902	-	99	81.690	Mandrillus_leucophaeus
ENSODEG00000015976	-	92	50.929	ENSMAMG00000011034	smn1	91	51.504	Mastacembelus_armatus
ENSODEG00000015976	-	91	53.846	ENSMZEG00005013634	smn1	91	53.462	Maylandia_zebra
ENSODEG00000015976	-	67	57.447	ENSMGAG00000008889	-	89	53.299	Meleagris_gallopavo
ENSODEG00000015976	-	97	77.455	ENSMAUG00000010262	Smn1	95	77.455	Mesocricetus_auratus
ENSODEG00000015976	-	85	78.715	ENSMICG00000034708	-	91	80.085	Microcebus_murinus
ENSODEG00000015976	-	97	77.536	ENSMOCG00000017833	Smn1	95	77.455	Microtus_ochrogaster
ENSODEG00000015976	-	92	48.519	ENSMMOG00000005504	smn1	93	51.866	Mola_mola
ENSODEG00000015976	-	95	66.912	ENSMODG00000001436	-	92	67.626	Monodelphis_domestica
ENSODEG00000015976	-	91	50.741	ENSMALG00000008025	smn1	91	50.558	Monopterus_albus
ENSODEG00000015976	-	97	78.261	MGP_CAROLIEiJ_G0018836	Smn1	95	78.623	Mus_caroli
ENSODEG00000015976	-	97	77.899	ENSMUSG00000021645	Smn1	95	78.261	Mus_musculus
ENSODEG00000015976	-	97	75.273	MGP_PahariEiJ_G0015911	Smn1	95	76.364	Mus_pahari
ENSODEG00000015976	-	97	77.536	MGP_SPRETEiJ_G0019718	Smn1	95	77.899	Mus_spretus
ENSODEG00000015976	-	97	85.199	ENSMPUG00000014470	-	98	85.199	Mustela_putorius_furo
ENSODEG00000015976	-	94	80.657	ENSMLUG00000010603	-	91	79.859	Myotis_lucifugus
ENSODEG00000015976	-	97	80.000	ENSNGAG00000019833	Smn1	95	80.000	Nannospalax_galili
ENSODEG00000015976	-	91	53.358	ENSNBRG00000023000	smn1	91	54.580	Neolamprologus_brichardi
ENSODEG00000015976	-	97	80.144	ENSNLEG00000004454	-	99	79.930	Nomascus_leucogenys
ENSODEG00000015976	-	79	61.674	ENSMEUG00000011393	-	99	62.661	Notamacropus_eugenii
ENSODEG00000015976	-	88	78.682	ENSOPRG00000002015	-	100	78.295	Ochotona_princeps
ENSODEG00000015976	-	91	53.358	ENSONIG00000011799	smn1	91	54.580	Oreochromis_niloticus
ENSODEG00000015976	-	91	65.267	ENSOANG00000001626	-	91	64.259	Ornithorhynchus_anatinus
ENSODEG00000015976	-	96	72.695	ENSOCUG00000026649	-	94	78.571	Oryctolagus_cuniculus
ENSODEG00000015976	-	97	73.118	ENSOCUG00000025183	-	94	73.835	Oryctolagus_cuniculus
ENSODEG00000015976	-	96	78.417	ENSOCUG00000017097	-	94	80.797	Oryctolagus_cuniculus
ENSODEG00000015976	-	91	49.237	ENSORLG00000010552	smn1	91	49.237	Oryzias_latipes
ENSODEG00000015976	-	91	51.923	ENSORLG00020007936	smn1	90	50.376	Oryzias_latipes_hni
ENSODEG00000015976	-	54	56.410	ENSORLG00015022425	smn1	91	48.473	Oryzias_latipes_hsok
ENSODEG00000015976	-	91	49.071	ENSOMEG00000007824	smn1	91	49.434	Oryzias_melastigma
ENSODEG00000015976	-	94	73.162	ENSOGAG00000031414	-	100	70.748	Otolemur_garnettii
ENSODEG00000015976	-	91	80.000	ENSOARG00000005425	-	95	80.000	Ovis_aries
ENSODEG00000015976	-	97	79.577	ENSPPAG00000036640	-	99	79.577	Pan_paniscus
ENSODEG00000015976	-	97	82.909	ENSPPRG00000005575	-	95	82.909	Panthera_pardus
ENSODEG00000015976	-	97	82.609	ENSPTIG00000007745	-	95	82.609	Panthera_tigris_altaica
ENSODEG00000015976	-	97	78.746	ENSPTRG00000016955	-	99	79.094	Pan_troglodytes
ENSODEG00000015976	-	97	77.113	ENSPANG00000000253	-	94	77.617	Papio_anubis
ENSODEG00000015976	-	97	81.949	ENSPANG00000013601	-	95	81.690	Papio_anubis
ENSODEG00000015976	-	91	47.925	ENSPKIG00000011096	smn1	91	50.575	Paramormyrops_kingsleyae
ENSODEG00000015976	-	91	59.551	ENSPSIG00000014787	-	84	59.328	Pelodiscus_sinensis
ENSODEG00000015976	-	95	47.794	ENSPMGG00000012285	smn1	97	48.175	Periophthalmus_magnuspinnatus
ENSODEG00000015976	-	96	42.960	ENSPMAG00000005004	smn1	93	41.935	Petromyzon_marinus
ENSODEG00000015976	-	95	67.159	ENSPCIG00000025764	-	93	67.870	Phascolarctos_cinereus
ENSODEG00000015976	-	90	51.504	ENSPFOG00000007786	smn1	91	52.273	Poecilia_formosa
ENSODEG00000015976	-	91	51.923	ENSPLAG00000012071	smn1	91	52.652	Poecilia_latipinna
ENSODEG00000015976	-	91	51.538	ENSPMEG00000017085	smn1	91	52.273	Poecilia_mexicana
ENSODEG00000015976	-	90	52.222	ENSPREG00000005824	smn1	91	53.030	Poecilia_reticulata
ENSODEG00000015976	-	89	79.134	ENSPPYG00000015533	-	92	79.151	Pongo_abelii
ENSODEG00000015976	-	88	52.400	ENSPPYG00000019189	-	99	52.400	Pongo_abelii
ENSODEG00000015976	-	88	76.172	ENSPCAG00000004187	-	94	75.000	Procavia_capensis
ENSODEG00000015976	-	70	78.431	ENSPCOG00000022307	-	91	74.519	Propithecus_coquereli
ENSODEG00000015976	-	97	82.686	ENSPVAG00000005977	-	94	83.696	Pteropus_vampyrus
ENSODEG00000015976	-	91	53.358	ENSPNYG00000014148	smn1	91	54.580	Pundamilia_nyererei
ENSODEG00000015976	-	92	48.679	ENSPNAG00000014007	smn1	80	48.855	Pygocentrus_nattereri
ENSODEG00000015976	-	97	77.818	ENSRNOG00000018067	Smn1	94	77.818	Rattus_norvegicus
ENSODEG00000015976	-	97	81.338	ENSRBIG00000037052	-	95	81.338	Rhinopithecus_bieti
ENSODEG00000015976	-	97	67.509	ENSRBIG00000036775	-	93	68.953	Rhinopithecus_bieti
ENSODEG00000015976	-	97	65.827	ENSRROG00000031088	-	97	65.468	Rhinopithecus_roxellana
ENSODEG00000015976	-	97	81.338	ENSRROG00000039399	-	99	81.338	Rhinopithecus_roxellana
ENSODEG00000015976	-	85	74.609	ENSSBOG00000020112	-	91	72.659	Saimiri_boliviensis_boliviensis
ENSODEG00000015976	-	97	79.505	ENSSBOG00000011665	-	95	80.212	Saimiri_boliviensis_boliviensis
ENSODEG00000015976	-	95	67.647	ENSSHAG00000001499	-	94	66.160	Sarcophilus_harrisii
ENSODEG00000015976	-	91	49.630	ENSSFOG00015015507	smn1	91	51.145	Scleropages_formosus
ENSODEG00000015976	-	91	51.515	ENSSMAG00000007922	smn1	91	50.190	Scophthalmus_maximus
ENSODEG00000015976	-	91	52.190	ENSSDUG00000018533	smn1	91	51.880	Seriola_dumerili
ENSODEG00000015976	-	91	52.555	ENSSLDG00000021135	smn1	91	52.256	Seriola_lalandi_dorsalis
ENSODEG00000015976	-	91	65.267	ENSSPUG00000000373	-	90	63.359	Sphenodon_punctatus
ENSODEG00000015976	-	91	54.275	ENSSPAG00000004345	smn1	91	53.532	Stegastes_partitus
ENSODEG00000015976	-	94	59.551	ENSSSCG00000029127	-	91	60.584	Sus_scrofa
ENSODEG00000015976	-	71	53.769	ENSSSCG00000033865	-	87	53.769	Sus_scrofa
ENSODEG00000015976	-	97	80.565	ENSSSCG00000016970	-	95	81.295	Sus_scrofa
ENSODEG00000015976	-	95	59.489	ENSTGUG00000001548	-	99	54.286	Taeniopygia_guttata
ENSODEG00000015976	-	92	46.154	ENSTRUG00000000736	smn	91	46.768	Takifugu_rubripes
ENSODEG00000015976	-	91	47.670	ENSTNIG00000009892	smn1	91	49.077	Tetraodon_nigroviridis
ENSODEG00000015976	-	67	81.771	ENSTBEG00000002399	-	90	82.258	Tupaia_belangeri
ENSODEG00000015976	-	94	79.401	ENSTTRG00000005080	-	95	78.571	Tursiops_truncatus
ENSODEG00000015976	-	64	82.609	ENSUAMG00000024947	-	68	82.703	Ursus_americanus
ENSODEG00000015976	-	97	83.696	ENSUMAG00000007842	-	71	84.727	Ursus_maritimus
ENSODEG00000015976	-	94	72.659	ENSVPAG00000009887	-	99	72.364	Vicugna_pacos
ENSODEG00000015976	-	97	81.818	ENSVVUG00000006934	-	95	81.818	Vulpes_vulpes
ENSODEG00000015976	-	99	50.825	ENSXETG00000018189	smn2	92	50.174	Xenopus_tropicalis
ENSODEG00000015976	-	91	51.154	ENSXMAG00000001521	smn1	90	51.538	Xiphophorus_maculatus