EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000015988 (Gene tree)
Gene ID: 101575806
Gene Symbol: SRRM3
Alias: -
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 34935 bases
Position: chrJH651550.1:14246056-14280990
Accession: 101575806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021741	cwf21	PF08312.12	4.9e-16	1	1
ENSODEP00000021739	cwf21	PF08312.12	5.4e-16	1	1
ENSODEP00000021740	cwf21	PF08312.12	6.2e-16	1	1
ENSODEP00000021740	SRRM_C	PF15230.6	5.7e-25	1	1
ENSODEP00000021739	SRRM_C	PF15230.6	6.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022000	SRRM3-202	1815	-	ENSODEP00000021740	604 (aa)	-	-
ENSODET00000022001	SRRM3-203	1497	-	ENSODEP00000021741	498 (aa)	-	-
ENSODET00000021999	SRRM3-201	1962	XM_004630449	ENSODEP00000021739	647 (aa)	XP_004630506	UPI000333FA3D

Gene Model

Click here to download ENSODEG00000015988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000015988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000015988	SRRM3	56	89.227	ENSG00000177679	SRRM3	89	89.384	Homo_sapiens
ENSODEG00000015988	SRRM3	100	63.308	ENSANAG00000031983	SRRM3	61	79.381	Aotus_nancymaae
ENSODEG00000015988	SRRM3	59	80.064	ENSBTAG00000007879	-	98	81.928	Bos_taurus
ENSODEG00000015988	SRRM3	54	90.805	ENSCJAG00000016307	SRRM3	89	87.842	Callithrix_jacchus
ENSODEG00000015988	SRRM3	95	77.814	ENSCAFG00000013537	SRRM3	73	89.619	Canis_familiaris
ENSODEG00000015988	SRRM3	64	81.763	ENSCAFG00020013073	SRRM3	88	82.274	Canis_lupus_dingo
ENSODEG00000015988	SRRM3	64	80.967	ENSCHIG00000014018	SRRM3	97	81.801	Capra_hircus
ENSODEG00000015988	SRRM3	89	85.714	ENSCPOG00000038685	SRRM3	89	86.395	Cavia_porcellus
ENSODEG00000015988	SRRM3	64	81.212	ENSCCAG00000033359	SRRM3	89	88.185	Cebus_capucinus
ENSODEG00000015988	SRRM3	100	71.254	ENSCATG00000043129	SRRM3	57	77.570	Cercocebus_atys
ENSODEG00000015988	SRRM3	89	88.908	ENSCLAG00000007682	SRRM3	100	94.355	Chinchilla_lanigera
ENSODEG00000015988	SRRM3	54	89.080	ENSCSAG00000018140	SRRM3	97	84.629	Chlorocebus_sabaeus
ENSODEG00000015988	SRRM3	89	88.144	ENSCGRG00001011385	Srrm3	89	86.942	Cricetulus_griseus_chok1gshd
ENSODEG00000015988	SRRM3	89	72.774	ENSDNOG00000046922	SRRM3	90	72.603	Dasypus_novemcinctus
ENSODEG00000015988	SRRM3	52	90.774	ENSEASG00005016840	-	88	90.691	Equus_asinus_asinus
ENSODEG00000015988	SRRM3	52	90.746	ENSECAG00000022142	-	88	90.663	Equus_caballus
ENSODEG00000015988	SRRM3	56	88.122	ENSFCAG00000044112	SRRM3	89	84.983	Felis_catus
ENSODEG00000015988	SRRM3	95	53.610	ENSFDAG00000016913	SRRM3	99	96.250	Fukomys_damarensis
ENSODEG00000015988	SRRM3	64	77.083	ENSHGLG00000015576	SRRM3	100	90.323	Heterocephalus_glaber_female
ENSODEG00000015988	SRRM3	85	91.618	ENSSTOG00000014181	SRRM3	100	90.323	Ictidomys_tridecemlineatus
ENSODEG00000015988	SRRM3	97	73.208	ENSJJAG00000023441	Srrm3	97	80.450	Jaculus_jaculus
ENSODEG00000015988	SRRM3	88	43.564	ENSLOCG00000002879	SRRM3	59	59.809	Lepisosteus_oculatus
ENSODEG00000015988	SRRM3	67	50.904	ENSMGAG00000003690	SRRM3	75	65.052	Meleagris_gallopavo
ENSODEG00000015988	SRRM3	90	82.906	ENSMAUG00000017613	Srrm3	100	91.935	Mesocricetus_auratus
ENSODEG00000015988	SRRM3	88	92.262	ENSMICG00000010668	SRRM3	56	92.470	Microcebus_murinus
ENSODEG00000015988	SRRM3	96	88.264	ENSMOCG00000002565	Srrm3	89	86.770	Microtus_ochrogaster
ENSODEG00000015988	SRRM3	53	89.150	MGP_CAROLIEiJ_G0027845	-	97	90.060	Mus_caroli
ENSODEG00000015988	SRRM3	96	88.103	ENSMUSG00000039860	Srrm3	100	91.935	Mus_musculus
ENSODEG00000015988	SRRM3	95	87.987	MGP_PahariEiJ_G0024425	Srrm3	100	92.742	Mus_pahari
ENSODEG00000015988	SRRM3	96	87.781	MGP_SPRETEiJ_G0028844	Srrm3	100	91.129	Mus_spretus
ENSODEG00000015988	SRRM3	92	60.797	ENSNLEG00000008423	-	54	77.778	Nomascus_leucogenys
ENSODEG00000015988	SRRM3	51	90.303	ENSOGAG00000030805	SRRM3	89	86.644	Otolemur_garnettii
ENSODEG00000015988	SRRM3	52	76.945	ENSOARG00000013722	SRRM3	51	78.338	Ovis_aries
ENSODEG00000015988	SRRM3	56	88.950	ENSPTRG00000019317	SRRM3	89	88.356	Pan_troglodytes
ENSODEG00000015988	SRRM3	71	82.258	ENSPCAG00000013700	SRRM3	76	76.860	Procavia_capensis
ENSODEG00000015988	SRRM3	56	90.028	ENSPCOG00000028464	SRRM3	89	85.616	Propithecus_coquereli
ENSODEG00000015988	SRRM3	96	87.942	ENSRNOG00000001439	Srrm3	89	86.426	Rattus_norvegicus
ENSODEG00000015988	SRRM3	79	90.854	ENSRROG00000034980	SRRM3	81	94.737	Rhinopithecus_roxellana
ENSODEG00000015988	SRRM3	64	82.500	ENSSSCG00000032250	SRRM3	89	82.625	Sus_scrofa
ENSODEG00000015988	SRRM3	57	79.339	ENSTTRG00000014836	-	62	79.339	Tursiops_truncatus