EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016046 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1340 bases
Position: chrJH651516.1:18354081-18355420
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021819	RNase_T	PF00929.24	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022079	-	543	-	ENSODEP00000021819	180 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016046	-	79	77.019	ENSODEG00000009750	-	86	77.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016046	-	98	81.215	ENSG00000076043	REXO2	86	76.398	Homo_sapiens
ENSODEG00000016046	-	50	73.626	ENSAPOG00000011971	smfn	78	73.626	Acanthochromis_polyacanthus
ENSODEG00000016046	-	98	76.410	ENSAMEG00000013263	REXO2	82	76.410	Ailuropoda_melanoleuca
ENSODEG00000016046	-	79	65.217	ENSACIG00000023553	smfn	87	65.217	Amphilophus_citrinellus
ENSODEG00000016046	-	52	72.632	ENSAOCG00000011565	smfn	58	72.632	Amphiprion_ocellaris
ENSODEG00000016046	-	92	62.295	ENSAPEG00000012435	smfn	68	62.295	Amphiprion_percula
ENSODEG00000016046	-	89	64.246	ENSATEG00000015385	smfn	64	64.246	Anabas_testudineus
ENSODEG00000016046	-	89	67.978	ENSAPLG00000005045	REXO2	87	67.978	Anas_platyrhynchos
ENSODEG00000016046	-	88	62.791	ENSACAG00000011631	REXO2	82	62.791	Anolis_carolinensis
ENSODEG00000016046	-	98	76.410	ENSANAG00000020834	REXO2	82	76.410	Aotus_nancymaae
ENSODEG00000016046	-	56	60.870	ENSANAG00000027457	-	81	60.870	Aotus_nancymaae
ENSODEG00000016046	-	91	63.536	ENSACLG00000024566	smfn	85	64.596	Astatotilapia_calliptera
ENSODEG00000016046	-	98	76.410	ENSBTAG00000005843	REXO2	82	76.410	Bos_taurus
ENSODEG00000016046	-	87	40.000	WBGene00007429	C08B6.8	82	50.000	Caenorhabditis_elegans
ENSODEG00000016046	-	98	75.897	ENSCJAG00000012434	REXO2	82	75.897	Callithrix_jacchus
ENSODEG00000016046	-	98	76.289	ENSCAFG00000013511	REXO2	82	76.289	Canis_familiaris
ENSODEG00000016046	-	98	76.410	ENSCAFG00020002513	REXO2	82	76.410	Canis_lupus_dingo
ENSODEG00000016046	-	98	76.923	ENSCHIG00000009264	REXO2	82	76.923	Capra_hircus
ENSODEG00000016046	-	72	76.692	ENSTSYG00000027948	-	72	76.692	Carlito_syrichta
ENSODEG00000016046	-	98	76.923	ENSTSYG00000002237	REXO2	82	76.923	Carlito_syrichta
ENSODEG00000016046	-	79	77.019	ENSCAPG00000006093	REXO2	86	77.019	Cavia_aperea
ENSODEG00000016046	-	98	78.462	ENSCPOG00000010548	REXO2	82	78.462	Cavia_porcellus
ENSODEG00000016046	-	98	75.897	ENSCCAG00000034979	REXO2	82	75.897	Cebus_capucinus
ENSODEG00000016046	-	98	75.897	ENSCATG00000015278	REXO2	82	75.897	Cercocebus_atys
ENSODEG00000016046	-	98	79.381	ENSCLAG00000011195	REXO2	82	79.381	Chinchilla_lanigera
ENSODEG00000016046	-	98	75.385	ENSCSAG00000002754	REXO2	82	75.385	Chlorocebus_sabaeus
ENSODEG00000016046	-	98	73.333	ENSCHOG00000000642	-	82	73.333	Choloepus_hoffmanni
ENSODEG00000016046	-	59	68.800	ENSCHOG00000013497	REXO2	89	68.800	Choloepus_hoffmanni
ENSODEG00000016046	-	57	74.138	ENSCPBG00000009359	REXO2	81	74.138	Chrysemys_picta_bellii
ENSODEG00000016046	-	88	49.153	ENSCING00000009858	-	85	49.153	Ciona_intestinalis
ENSODEG00000016046	-	98	75.897	ENSCANG00000034756	REXO2	82	75.897	Colobus_angolensis_palliatus
ENSODEG00000016046	-	89	76.404	ENSCGRG00001010922	-	87	76.404	Cricetulus_griseus_chok1gshd
ENSODEG00000016046	-	98	75.385	ENSCGRG00001019814	-	82	75.385	Cricetulus_griseus_chok1gshd
ENSODEG00000016046	-	89	77.528	ENSCGRG00001013673	-	87	77.528	Cricetulus_griseus_chok1gshd
ENSODEG00000016046	-	98	75.385	ENSCGRG00000006235	Rexo2	82	75.385	Cricetulus_griseus_crigri
ENSODEG00000016046	-	84	68.047	ENSCSEG00000007214	smfn	64	66.102	Cynoglossus_semilaevis
ENSODEG00000016046	-	79	65.217	ENSCVAG00000012008	smfn	87	65.217	Cyprinodon_variegatus
ENSODEG00000016046	-	94	63.298	ENSDARG00000009806	smfn	73	63.298	Danio_rerio
ENSODEG00000016046	-	97	75.773	ENSDNOG00000046533	REXO2	93	75.773	Dasypus_novemcinctus
ENSODEG00000016046	-	98	76.923	ENSDORG00000011255	Rexo2	83	76.650	Dipodomys_ordii
ENSODEG00000016046	-	83	62.195	ENSDORG00000025142	-	82	59.043	Dipodomys_ordii
ENSODEG00000016046	-	83	46.108	FBgn0039115	CG10214	79	46.108	Drosophila_melanogaster
ENSODEG00000016046	-	89	62.360	ENSEBUG00000013964	REXO2	61	62.011	Eptatretus_burgeri
ENSODEG00000016046	-	98	75.897	ENSEASG00005006674	REXO2	82	75.897	Equus_asinus_asinus
ENSODEG00000016046	-	98	75.897	ENSECAG00000005988	REXO2	82	75.897	Equus_caballus
ENSODEG00000016046	-	86	67.442	ENSELUG00000020072	smfn	60	67.442	Esox_lucius
ENSODEG00000016046	-	98	77.436	ENSFCAG00000018632	REXO2	82	77.436	Felis_catus
ENSODEG00000016046	-	80	72.222	ENSFALG00000010044	REXO2	80	72.222	Ficedula_albicollis
ENSODEG00000016046	-	98	77.949	ENSFDAG00000011764	REXO2	82	77.949	Fukomys_damarensis
ENSODEG00000016046	-	58	39.815	ENSFHEG00000022493	-	81	39.623	Fundulus_heteroclitus
ENSODEG00000016046	-	88	64.773	ENSGMOG00000006370	smfn	91	64.773	Gadus_morhua
ENSODEG00000016046	-	84	74.706	ENSGALG00000035980	REXO2	87	67.980	Gallus_gallus
ENSODEG00000016046	-	89	64.246	ENSGAFG00000015349	smfn	64	64.246	Gambusia_affinis
ENSODEG00000016046	-	85	64.912	ENSGACG00000020096	smfn	85	64.912	Gasterosteus_aculeatus
ENSODEG00000016046	-	99	67.839	ENSGAGG00000021126	REXO2	86	67.839	Gopherus_agassizii
ENSODEG00000016046	-	98	76.410	ENSGGOG00000023267	REXO2	86	75.556	Gorilla_gorilla
ENSODEG00000016046	-	91	51.829	ENSHBUG00000020097	REXO2	66	51.829	Haplochromis_burtoni
ENSODEG00000016046	-	98	76.923	ENSHGLG00000013556	REXO2	82	76.923	Heterocephalus_glaber_female
ENSODEG00000016046	-	98	77.436	ENSHGLG00100005257	REXO2	82	77.436	Heterocephalus_glaber_male
ENSODEG00000016046	-	79	63.975	ENSHCOG00000007122	smfn	90	63.975	Hippocampus_comes
ENSODEG00000016046	-	87	66.286	ENSIPUG00000020440	rexo2	65	65.909	Ictalurus_punctatus
ENSODEG00000016046	-	98	77.436	ENSSTOG00000012465	REXO2	82	77.436	Ictidomys_tridecemlineatus
ENSODEG00000016046	-	98	61.111	ENSJJAG00000022605	-	78	61.111	Jaculus_jaculus
ENSODEG00000016046	-	98	77.436	ENSJJAG00000013710	-	82	77.436	Jaculus_jaculus
ENSODEG00000016046	-	84	67.059	ENSKMAG00000016795	smfn	65	64.481	Kryptolebias_marmoratus
ENSODEG00000016046	-	79	63.354	ENSLBEG00000006021	smfn	85	63.354	Labrus_bergylta
ENSODEG00000016046	-	98	59.091	ENSLACG00000018623	REXO2	81	59.091	Latimeria_chalumnae
ENSODEG00000016046	-	88	69.318	ENSLOCG00000002389	smfn	84	69.318	Lepisosteus_oculatus
ENSODEG00000016046	-	87	77.586	ENSLAFG00000012451	REXO2	82	75.385	Loxodonta_africana
ENSODEG00000016046	-	98	75.897	ENSMFAG00000041155	REXO2	82	75.897	Macaca_fascicularis
ENSODEG00000016046	-	98	75.897	ENSMMUG00000012269	REXO2	82	75.897	Macaca_mulatta
ENSODEG00000016046	-	98	75.897	ENSMNEG00000033379	REXO2	82	75.897	Macaca_nemestrina
ENSODEG00000016046	-	98	75.897	ENSMLEG00000036571	REXO2	82	75.897	Mandrillus_leucophaeus
ENSODEG00000016046	-	88	64.407	ENSMAMG00000021209	smfn	64	64.407	Mastacembelus_armatus
ENSODEG00000016046	-	91	67.066	ENSMZEG00005020730	REXO2	69	67.066	Maylandia_zebra
ENSODEG00000016046	-	91	63.536	ENSMZEG00005023224	-	69	63.536	Maylandia_zebra
ENSODEG00000016046	-	66	75.000	ENSMGAG00000003026	REXO2	83	75.000	Meleagris_gallopavo
ENSODEG00000016046	-	98	75.385	ENSMAUG00000014576	Rexo2	82	75.385	Mesocricetus_auratus
ENSODEG00000016046	-	98	76.923	ENSMICG00000010094	REXO2	82	76.923	Microcebus_murinus
ENSODEG00000016046	-	98	74.872	ENSMOCG00000009016	Rexo2	82	74.872	Microtus_ochrogaster
ENSODEG00000016046	-	86	65.896	ENSMMOG00000006430	smfn	64	65.896	Mola_mola
ENSODEG00000016046	-	98	74.227	ENSMODG00000013913	REXO2	82	74.227	Monodelphis_domestica
ENSODEG00000016046	-	89	63.128	ENSMALG00000018130	smfn	51	63.128	Monopterus_albus
ENSODEG00000016046	-	98	75.385	MGP_CAROLIEiJ_G0032166	Rexo2	82	75.385	Mus_caroli
ENSODEG00000016046	-	98	75.385	ENSMUSG00000032026	Rexo2	82	75.385	Mus_musculus
ENSODEG00000016046	-	98	75.385	MGP_PahariEiJ_G0015034	Rexo2	82	75.385	Mus_pahari
ENSODEG00000016046	-	98	75.385	MGP_SPRETEiJ_G0033305	Rexo2	82	75.385	Mus_spretus
ENSODEG00000016046	-	98	76.410	ENSMPUG00000003947	REXO2	82	76.410	Mustela_putorius_furo
ENSODEG00000016046	-	98	76.923	ENSMLUG00000009030	REXO2	82	76.923	Myotis_lucifugus
ENSODEG00000016046	-	89	77.528	ENSNGAG00000008819	Rexo2	87	77.528	Nannospalax_galili
ENSODEG00000016046	-	79	64.596	ENSNBRG00000006529	smfn	86	64.596	Neolamprologus_brichardi
ENSODEG00000016046	-	98	76.410	ENSNLEG00000029745	REXO2	82	76.410	Nomascus_leucogenys
ENSODEG00000016046	-	96	73.684	ENSMEUG00000011558	REXO2	87	73.684	Notamacropus_eugenii
ENSODEG00000016046	-	94	57.979	ENSOPRG00000011076	REXO2	82	57.949	Ochotona_princeps
ENSODEG00000016046	-	88	64.972	ENSONIG00000001954	smfn	77	64.972	Oreochromis_niloticus
ENSODEG00000016046	-	91	74.033	ENSOANG00000001754	REXO2	81	72.165	Ornithorhynchus_anatinus
ENSODEG00000016046	-	94	77.660	ENSOCUG00000004274	REXO2	78	76.923	Oryctolagus_cuniculus
ENSODEG00000016046	-	91	64.641	ENSORLG00000005119	smfn	59	64.641	Oryzias_latipes
ENSODEG00000016046	-	91	64.641	ENSORLG00020010121	smfn	59	64.641	Oryzias_latipes_hni
ENSODEG00000016046	-	91	64.641	ENSORLG00015015699	smfn	59	64.641	Oryzias_latipes_hsok
ENSODEG00000016046	-	95	62.963	ENSOMEG00000016878	REXO2	69	62.963	Oryzias_melastigma
ENSODEG00000016046	-	57	66.102	ENSOMEG00000008940	-	83	66.102	Oryzias_melastigma
ENSODEG00000016046	-	98	76.923	ENSOGAG00000016860	REXO2	82	76.923	Otolemur_garnettii
ENSODEG00000016046	-	87	78.161	ENSOARG00000001040	REXO2	83	78.409	Ovis_aries
ENSODEG00000016046	-	98	75.897	ENSPPAG00000039849	REXO2	82	75.897	Pan_paniscus
ENSODEG00000016046	-	98	77.436	ENSPPRG00000007255	REXO2	82	77.436	Panthera_pardus
ENSODEG00000016046	-	79	77.019	ENSPTIG00000015578	REXO2	86	77.019	Panthera_tigris_altaica
ENSODEG00000016046	-	98	75.897	ENSPTRG00000004306	REXO2	82	75.897	Pan_troglodytes
ENSODEG00000016046	-	98	75.897	ENSPANG00000010675	REXO2	82	75.897	Papio_anubis
ENSODEG00000016046	-	88	67.232	ENSPKIG00000000911	smfn	77	66.216	Paramormyrops_kingsleyae
ENSODEG00000016046	-	86	72.254	ENSPSIG00000005151	REXO2	72	68.342	Pelodiscus_sinensis
ENSODEG00000016046	-	79	66.460	ENSPMGG00000007442	smfn	86	66.460	Periophthalmus_magnuspinnatus
ENSODEG00000016046	-	98	63.731	ENSPEMG00000001421	Rexo2	82	63.590	Peromyscus_maniculatus_bairdii
ENSODEG00000016046	-	57	68.571	ENSPMAG00000001022	REXO2	91	68.571	Petromyzon_marinus
ENSODEG00000016046	-	98	74.227	ENSPCIG00000011227	REXO2	52	74.227	Phascolarctos_cinereus
ENSODEG00000016046	-	89	64.804	ENSPFOG00000017861	smfn	87	65.537	Poecilia_formosa
ENSODEG00000016046	-	89	61.453	ENSPLAG00000007327	REXO2	68	61.453	Poecilia_latipinna
ENSODEG00000016046	-	89	64.804	ENSPMEG00000017343	smfn	64	64.804	Poecilia_mexicana
ENSODEG00000016046	-	89	64.246	ENSPREG00000016438	smfn	64	64.246	Poecilia_reticulata
ENSODEG00000016046	-	98	76.410	ENSPPYG00000003895	REXO2	82	76.410	Pongo_abelii
ENSODEG00000016046	-	98	73.333	ENSPCAG00000005237	REXO2	82	74.872	Procavia_capensis
ENSODEG00000016046	-	89	75.000	ENSPCOG00000027639	REXO2	92	75.000	Propithecus_coquereli
ENSODEG00000016046	-	98	69.543	ENSPVAG00000005295	REXO2	82	69.543	Pteropus_vampyrus
ENSODEG00000016046	-	91	67.066	ENSPNYG00000018401	smfn	69	67.066	Pundamilia_nyererei
ENSODEG00000016046	-	86	67.442	ENSPNAG00000005290	smfn	65	67.045	Pygocentrus_nattereri
ENSODEG00000016046	-	98	75.385	ENSRNOG00000018939	Rexo2	82	75.385	Rattus_norvegicus
ENSODEG00000016046	-	98	75.897	ENSRBIG00000037809	REXO2	82	75.897	Rhinopithecus_bieti
ENSODEG00000016046	-	98	75.897	ENSRROG00000038928	REXO2	82	75.897	Rhinopithecus_roxellana
ENSODEG00000016046	-	83	34.444	YLR059C	REX2	65	34.444	Saccharomyces_cerevisiae
ENSODEG00000016046	-	98	76.410	ENSSBOG00000028651	REXO2	82	76.410	Saimiri_boliviensis_boliviensis
ENSODEG00000016046	-	98	73.711	ENSSHAG00000008008	REXO2	83	73.711	Sarcophilus_harrisii
ENSODEG00000016046	-	79	67.081	ENSSFOG00015022414	smfn	86	67.081	Scleropages_formosus
ENSODEG00000016046	-	86	65.318	ENSSMAG00000003168	smfn	63	65.318	Scophthalmus_maximus
ENSODEG00000016046	-	98	61.026	ENSSDUG00000015624	smfn	68	61.026	Seriola_dumerili
ENSODEG00000016046	-	98	63.077	ENSSLDG00000014005	smfn	68	63.077	Seriola_lalandi_dorsalis
ENSODEG00000016046	-	61	73.228	ENSSARG00000014530	REXO2	100	73.228	Sorex_araneus
ENSODEG00000016046	-	66	72.180	ENSSPUG00000006005	REXO2	71	72.180	Sphenodon_punctatus
ENSODEG00000016046	-	79	67.081	ENSSPAG00000001530	smfn	87	67.081	Stegastes_partitus
ENSODEG00000016046	-	98	77.436	ENSSSCG00000015056	REXO2	86	76.667	Sus_scrofa
ENSODEG00000016046	-	86	72.674	ENSTGUG00000000121	REXO2	86	65.842	Taeniopygia_guttata
ENSODEG00000016046	-	84	66.471	ENSTRUG00000021529	smfn	65	66.474	Takifugu_rubripes
ENSODEG00000016046	-	84	68.235	ENSTNIG00000008588	smfn	85	63.077	Tetraodon_nigroviridis
ENSODEG00000016046	-	98	76.410	ENSTBEG00000017040	REXO2	82	76.410	Tupaia_belangeri
ENSODEG00000016046	-	98	75.385	ENSTTRG00000014928	REXO2	82	75.385	Tursiops_truncatus
ENSODEG00000016046	-	98	67.857	ENSUAMG00000019096	REXO2	92	76.111	Ursus_americanus
ENSODEG00000016046	-	98	76.923	ENSUMAG00000003770	REXO2	82	76.923	Ursus_maritimus
ENSODEG00000016046	-	79	56.522	ENSVPAG00000006301	REXO2	86	56.522	Vicugna_pacos
ENSODEG00000016046	-	98	75.897	ENSVVUG00000025223	REXO2	83	75.897	Vulpes_vulpes
ENSODEG00000016046	-	94	65.957	ENSXETG00000012648	rexo2	85	61.611	Xenopus_tropicalis
ENSODEG00000016046	-	82	64.458	ENSXCOG00000018838	smfn	82	65.839	Xiphophorus_couchianus
ENSODEG00000016046	-	88	64.407	ENSXMAG00000021125	smfn	57	64.407	Xiphophorus_maculatus