EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016056 (Gene tree)
Gene ID: 101581447
Gene Symbol: RAB23
Alias: -
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 23831 bases
Position: chrJH651516.1:12052578-12076408
Accession: 101581447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021835	MMR_HSR1	PF01926.23	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022095	RAB23-201	773	XM_004623010	ENSODEP00000021835	237 (aa)	XP_004623067	UPI000333E05F

Gene Model

Click here to download ENSODEG00000016056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016056	RAB23	65	36.129	ENSODEG00000009963	RHEB	84	36.129
ENSODEG00000016056	RAB23	66	39.241	ENSODEG00000005942	RAB6A	76	39.241
ENSODEG00000016056	RAB23	77	37.634	ENSODEG00000012270	RAB34	70	37.634
ENSODEG00000016056	RAB23	70	36.095	ENSODEG00000000520	RAB39B	79	36.095
ENSODEG00000016056	RAB23	68	35.928	ENSODEG00000019004	RAB9A	83	35.928
ENSODEG00000016056	RAB23	77	33.871	ENSODEG00000006414	RAB12	82	33.871
ENSODEG00000016056	RAB23	75	35.393	ENSODEG00000007219	RAB35	90	34.807
ENSODEG00000016056	RAB23	75	33.155	ENSODEG00000010294	RASL11B	74	33.155
ENSODEG00000016056	RAB23	80	35.602	ENSODEG00000011371	RAB11B	88	35.602
ENSODEG00000016056	RAB23	86	32.524	ENSODEG00000009908	RAB25	92	32.524
ENSODEG00000016056	RAB23	65	32.468	ENSODEG00000000054	RAB22A	79	32.468
ENSODEG00000016056	RAB23	67	37.500	ENSODEG00000003860	RAB5B	74	37.500
ENSODEG00000016056	RAB23	73	35.838	ENSODEG00000017920	RAB5C	80	35.838
ENSODEG00000016056	RAB23	80	31.472	ENSODEG00000011726	RAB33A	83	31.472
ENSODEG00000016056	RAB23	74	38.068	ENSODEG00000003833	RAB30	87	38.068
ENSODEG00000016056	RAB23	70	34.337	ENSODEG00000002013	RAB14	77	34.337
ENSODEG00000016056	RAB23	80	31.959	ENSODEG00000013827	RAB15	87	32.292
ENSODEG00000016056	RAB23	72	30.286	ENSODEG00000010425	RAB24	86	32.571
ENSODEG00000016056	RAB23	76	31.351	ENSODEG00000009994	RERG	90	31.351
ENSODEG00000016056	RAB23	67	36.250	ENSODEG00000011248	-	82	35.583
ENSODEG00000016056	RAB23	71	34.911	ENSODEG00000016788	-	85	34.911
ENSODEG00000016056	RAB23	67	31.677	ENSODEG00000018151	MRAS	80	34.302
ENSODEG00000016056	RAB23	63	30.921	ENSODEG00000007937	NRAS	85	33.742
ENSODEG00000016056	RAB23	63	30.263	ENSODEG00000015703	HRAS	86	32.927
ENSODEG00000016056	RAB23	70	35.260	ENSODEG00000002594	-	62	35.260
ENSODEG00000016056	RAB23	80	34.555	ENSODEG00000016878	-	88	34.555
ENSODEG00000016056	RAB23	73	32.961	ENSODEG00000002979	RAB33B	78	32.961
ENSODEG00000016056	RAB23	71	36.095	ENSODEG00000001343	RAB2B	78	36.095
ENSODEG00000016056	RAB23	51	37.398	ENSODEG00000000290	-	83	37.398
ENSODEG00000016056	RAB23	64	37.342	ENSODEG00000002835	RAB7A	96	37.342
ENSODEG00000016056	RAB23	69	38.922	ENSODEG00000010443	-	81	38.922
ENSODEG00000016056	RAB23	67	36.646	ENSODEG00000019065	-	85	36.646
ENSODEG00000016056	RAB23	94	34.956	ENSODEG00000009016	RAB36	70	34.956
ENSODEG00000016056	RAB23	79	33.508	ENSODEG00000017847	-	95	33.508
ENSODEG00000016056	RAB23	84	32.663	ENSODEG00000002369	-	80	34.911
ENSODEG00000016056	RAB23	61	31.293	ENSODEG00000010412	KRAS	94	32.222
ENSODEG00000016056	RAB23	72	34.884	ENSODEG00000004150	-	83	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016056	RAB23	100	93.249	ENSG00000112210	RAB23	100	93.249	Homo_sapiens
ENSODEG00000016056	RAB23	99	82.479	ENSAPOG00000008892	rab23	99	82.479	Acanthochromis_polyacanthus
ENSODEG00000016056	RAB23	100	92.827	ENSAMEG00000006825	RAB23	100	92.827	Ailuropoda_melanoleuca
ENSODEG00000016056	RAB23	99	71.186	ENSACIG00000020496	rab23	99	71.186	Amphilophus_citrinellus
ENSODEG00000016056	RAB23	99	82.203	ENSAOCG00000004234	rab23	99	82.203	Amphiprion_ocellaris
ENSODEG00000016056	RAB23	99	82.203	ENSAPEG00000019758	rab23	99	82.203	Amphiprion_percula
ENSODEG00000016056	RAB23	99	80.932	ENSATEG00000020913	rab23	99	80.932	Anabas_testudineus
ENSODEG00000016056	RAB23	74	90.909	ENSAPLG00000003715	RAB23	99	90.909	Anas_platyrhynchos
ENSODEG00000016056	RAB23	100	86.134	ENSACAG00000006656	RAB23	100	86.134	Anolis_carolinensis
ENSODEG00000016056	RAB23	100	92.827	ENSANAG00000027052	-	100	92.827	Aotus_nancymaae
ENSODEG00000016056	RAB23	99	81.356	ENSACLG00000002819	rab23	99	81.356	Astatotilapia_calliptera
ENSODEG00000016056	RAB23	99	83.898	ENSAMXG00000014960	rab23	99	83.898	Astyanax_mexicanus
ENSODEG00000016056	RAB23	100	90.717	ENSBTAG00000005362	RAB23	100	90.717	Bos_taurus
ENSODEG00000016056	RAB23	100	92.827	ENSCJAG00000010247	RAB23	100	92.827	Callithrix_jacchus
ENSODEG00000016056	RAB23	100	92.827	ENSCAFG00000002459	RAB23	100	92.827	Canis_familiaris
ENSODEG00000016056	RAB23	100	92.827	ENSCAFG00020015900	RAB23	100	92.827	Canis_lupus_dingo
ENSODEG00000016056	RAB23	100	90.717	ENSCHIG00000009815	RAB23	100	90.717	Capra_hircus
ENSODEG00000016056	RAB23	99	92.373	ENSTSYG00000029126	RAB23	99	92.373	Carlito_syrichta
ENSODEG00000016056	RAB23	100	91.561	ENSCPOG00000030218	RAB23	100	91.561	Cavia_porcellus
ENSODEG00000016056	RAB23	100	92.405	ENSCCAG00000020364	RAB23	100	92.405	Cebus_capucinus
ENSODEG00000016056	RAB23	100	93.671	ENSCATG00000027876	RAB23	100	93.671	Cercocebus_atys
ENSODEG00000016056	RAB23	100	93.671	ENSCLAG00000000797	RAB23	100	93.671	Chinchilla_lanigera
ENSODEG00000016056	RAB23	100	92.827	ENSCSAG00000013438	RAB23	100	92.827	Chlorocebus_sabaeus
ENSODEG00000016056	RAB23	100	86.498	ENSCPBG00000022640	RAB23	100	86.498	Chrysemys_picta_bellii
ENSODEG00000016056	RAB23	99	65.289	ENSCING00000001155	-	99	65.702	Ciona_intestinalis
ENSODEG00000016056	RAB23	99	63.025	ENSCSAVG00000001356	-	99	63.445	Ciona_savignyi
ENSODEG00000016056	RAB23	100	92.827	ENSCANG00000031065	RAB23	100	92.827	Colobus_angolensis_palliatus
ENSODEG00000016056	RAB23	100	89.873	ENSCGRG00001008994	Rab23	100	89.873	Cricetulus_griseus_chok1gshd
ENSODEG00000016056	RAB23	99	88.983	ENSCGRG00000013630	Rab23	100	88.983	Cricetulus_griseus_crigri
ENSODEG00000016056	RAB23	99	72.222	ENSCSEG00000010565	rab23	99	72.222	Cynoglossus_semilaevis
ENSODEG00000016056	RAB23	99	81.435	ENSCVAG00000020501	rab23	99	81.435	Cyprinodon_variegatus
ENSODEG00000016056	RAB23	99	82.627	ENSDARG00000004151	rab23	99	83.333	Danio_rerio
ENSODEG00000016056	RAB23	100	89.451	ENSDNOG00000015501	RAB23	100	89.451	Dasypus_novemcinctus
ENSODEG00000016056	RAB23	99	91.102	ENSDORG00000028344	Rab23	99	91.102	Dipodomys_ordii
ENSODEG00000016056	RAB23	82	64.356	FBgn0037364	Rab23	75	64.356	Drosophila_melanogaster
ENSODEG00000016056	RAB23	97	67.241	ENSEBUG00000010861	-	92	67.241	Eptatretus_burgeri
ENSODEG00000016056	RAB23	100	91.983	ENSEASG00005003529	RAB23	100	91.983	Equus_asinus_asinus
ENSODEG00000016056	RAB23	100	91.139	ENSECAG00000013427	RAB23	100	91.139	Equus_caballus
ENSODEG00000016056	RAB23	99	90.678	ENSEEUG00000015045	RAB23	99	90.678	Erinaceus_europaeus
ENSODEG00000016056	RAB23	99	81.780	ENSELUG00000020788	rab23	99	82.203	Esox_lucius
ENSODEG00000016056	RAB23	100	92.827	ENSFCAG00000044358	RAB23	100	92.827	Felis_catus
ENSODEG00000016056	RAB23	100	86.076	ENSFALG00000001708	RAB23	100	86.076	Ficedula_albicollis
ENSODEG00000016056	RAB23	100	91.561	ENSFDAG00000014834	RAB23	100	91.561	Fukomys_damarensis
ENSODEG00000016056	RAB23	99	80.508	ENSFHEG00000023069	rab23	99	81.356	Fundulus_heteroclitus
ENSODEG00000016056	RAB23	99	81.780	ENSGMOG00000005102	rab23	99	81.780	Gadus_morhua
ENSODEG00000016056	RAB23	100	84.388	ENSGALG00000016279	RAB23	100	84.388	Gallus_gallus
ENSODEG00000016056	RAB23	100	79.747	ENSGAFG00000007684	rab23	99	80.508	Gambusia_affinis
ENSODEG00000016056	RAB23	99	81.356	ENSGACG00000006151	rab23	99	81.356	Gasterosteus_aculeatus
ENSODEG00000016056	RAB23	100	86.920	ENSGAGG00000012709	RAB23	100	86.920	Gopherus_agassizii
ENSODEG00000016056	RAB23	99	72.034	ENSHBUG00000007966	rab23	99	72.034	Haplochromis_burtoni
ENSODEG00000016056	RAB23	100	78.008	ENSHGLG00000009371	-	100	78.008	Heterocephalus_glaber_female
ENSODEG00000016056	RAB23	100	94.093	ENSHGLG00000013030	-	100	94.093	Heterocephalus_glaber_female
ENSODEG00000016056	RAB23	100	94.093	ENSHGLG00100005945	-	100	94.093	Heterocephalus_glaber_male
ENSODEG00000016056	RAB23	100	78.008	ENSHGLG00100017177	-	100	78.008	Heterocephalus_glaber_male
ENSODEG00000016056	RAB23	99	69.915	ENSHCOG00000013919	rab23	99	70.339	Hippocampus_comes
ENSODEG00000016056	RAB23	99	73.305	ENSIPUG00000016494	rab23	99	73.932	Ictalurus_punctatus
ENSODEG00000016056	RAB23	100	92.827	ENSSTOG00000010962	RAB23	100	92.827	Ictidomys_tridecemlineatus
ENSODEG00000016056	RAB23	100	90.717	ENSJJAG00000020094	Rab23	100	90.717	Jaculus_jaculus
ENSODEG00000016056	RAB23	99	80.508	ENSKMAG00000018270	rab23	99	80.508	Kryptolebias_marmoratus
ENSODEG00000016056	RAB23	99	80.508	ENSLBEG00000013176	rab23	99	80.508	Labrus_bergylta
ENSODEG00000016056	RAB23	99	85.169	ENSLACG00000004025	RAB23	99	85.169	Latimeria_chalumnae
ENSODEG00000016056	RAB23	99	83.544	ENSLOCG00000016999	rab23	99	83.544	Lepisosteus_oculatus
ENSODEG00000016056	RAB23	100	92.827	ENSLAFG00000007209	RAB23	100	92.827	Loxodonta_africana
ENSODEG00000016056	RAB23	100	93.671	ENSMFAG00000032369	RAB23	100	93.671	Macaca_fascicularis
ENSODEG00000016056	RAB23	100	93.671	ENSMMUG00000018003	RAB23	100	93.671	Macaca_mulatta
ENSODEG00000016056	RAB23	100	93.671	ENSMNEG00000037012	RAB23	100	93.671	Macaca_nemestrina
ENSODEG00000016056	RAB23	100	93.671	ENSMLEG00000042429	RAB23	100	93.671	Mandrillus_leucophaeus
ENSODEG00000016056	RAB23	99	82.203	ENSMAMG00000015456	rab23	99	82.203	Mastacembelus_armatus
ENSODEG00000016056	RAB23	99	81.356	ENSMZEG00005005441	rab23	99	81.356	Maylandia_zebra
ENSODEG00000016056	RAB23	100	84.388	ENSMGAG00000013882	RAB23	100	84.388	Meleagris_gallopavo
ENSODEG00000016056	RAB23	100	92.827	ENSMICG00000014037	RAB23	100	92.827	Microcebus_murinus
ENSODEG00000016056	RAB23	100	89.451	ENSMOCG00000000444	Rab23	100	89.451	Microtus_ochrogaster
ENSODEG00000016056	RAB23	99	72.034	ENSMMOG00000007703	rab23	99	72.034	Mola_mola
ENSODEG00000016056	RAB23	100	90.295	ENSMODG00000018720	RAB23	100	90.295	Monodelphis_domestica
ENSODEG00000016056	RAB23	99	82.203	ENSMALG00000002136	rab23	99	82.203	Monopterus_albus
ENSODEG00000016056	RAB23	100	89.873	MGP_CAROLIEiJ_G0014015	Rab23	100	89.873	Mus_caroli
ENSODEG00000016056	RAB23	100	89.873	ENSMUSG00000004768	Rab23	100	89.873	Mus_musculus
ENSODEG00000016056	RAB23	100	89.030	MGP_PahariEiJ_G0027261	Rab23	100	89.030	Mus_pahari
ENSODEG00000016056	RAB23	100	89.873	MGP_SPRETEiJ_G0014820	Rab23	100	89.873	Mus_spretus
ENSODEG00000016056	RAB23	100	81.092	ENSMPUG00000002642	RAB23	100	81.092	Mustela_putorius_furo
ENSODEG00000016056	RAB23	100	91.983	ENSMLUG00000004058	RAB23	100	91.983	Myotis_lucifugus
ENSODEG00000016056	RAB23	100	91.983	ENSNGAG00000018038	Rab23	100	91.983	Nannospalax_galili
ENSODEG00000016056	RAB23	99	81.356	ENSNBRG00000013691	rab23	99	81.356	Neolamprologus_brichardi
ENSODEG00000016056	RAB23	100	93.671	ENSNLEG00000027830	RAB23	100	93.671	Nomascus_leucogenys
ENSODEG00000016056	RAB23	99	80.591	ENSONIG00000009749	rab23	99	80.591	Oreochromis_niloticus
ENSODEG00000016056	RAB23	100	89.873	ENSOANG00000001398	RAB23	100	89.873	Ornithorhynchus_anatinus
ENSODEG00000016056	RAB23	100	91.983	ENSOCUG00000004816	RAB23	100	91.983	Oryctolagus_cuniculus
ENSODEG00000016056	RAB23	99	80.085	ENSORLG00000010115	rab23	99	80.085	Oryzias_latipes
ENSODEG00000016056	RAB23	99	80.085	ENSORLG00020020220	rab23	99	80.085	Oryzias_latipes_hni
ENSODEG00000016056	RAB23	99	79.237	ENSORLG00015004033	rab23	99	79.237	Oryzias_latipes_hsok
ENSODEG00000016056	RAB23	99	79.661	ENSOMEG00000001706	rab23	99	79.661	Oryzias_melastigma
ENSODEG00000016056	RAB23	100	92.827	ENSOGAG00000005675	RAB23	100	92.827	Otolemur_garnettii
ENSODEG00000016056	RAB23	100	90.717	ENSOARG00000005749	RAB23	100	90.717	Ovis_aries
ENSODEG00000016056	RAB23	100	93.671	ENSPPAG00000010023	RAB23	100	93.671	Pan_paniscus
ENSODEG00000016056	RAB23	100	92.405	ENSPPRG00000012453	RAB23	100	92.405	Panthera_pardus
ENSODEG00000016056	RAB23	100	92.827	ENSPTIG00000009435	RAB23	100	92.827	Panthera_tigris_altaica
ENSODEG00000016056	RAB23	100	93.671	ENSPTRG00000043341	RAB23	100	93.671	Pan_troglodytes
ENSODEG00000016056	RAB23	100	93.671	ENSPANG00000017772	RAB23	100	93.671	Papio_anubis
ENSODEG00000016056	RAB23	81	87.565	ENSPKIG00000024310	rab23	95	87.565	Paramormyrops_kingsleyae
ENSODEG00000016056	RAB23	100	86.498	ENSPSIG00000015579	RAB23	100	86.498	Pelodiscus_sinensis
ENSODEG00000016056	RAB23	99	70.763	ENSPMGG00000008577	rab23	99	70.763	Periophthalmus_magnuspinnatus
ENSODEG00000016056	RAB23	100	89.873	ENSPEMG00000023271	Rab23	100	89.873	Peromyscus_maniculatus_bairdii
ENSODEG00000016056	RAB23	99	67.797	ENSPMAG00000006835	-	99	67.797	Petromyzon_marinus
ENSODEG00000016056	RAB23	100	90.295	ENSPCIG00000007267	RAB23	100	90.295	Phascolarctos_cinereus
ENSODEG00000016056	RAB23	99	80.508	ENSPFOG00000011493	rab23	99	80.508	Poecilia_formosa
ENSODEG00000016056	RAB23	99	80.085	ENSPLAG00000011697	rab23	99	80.085	Poecilia_latipinna
ENSODEG00000016056	RAB23	99	80.508	ENSPMEG00000017300	rab23	99	80.508	Poecilia_mexicana
ENSODEG00000016056	RAB23	99	70.763	ENSPREG00000022509	rab23	99	70.763	Poecilia_reticulata
ENSODEG00000016056	RAB23	100	93.671	ENSPPYG00000016739	RAB23	100	93.671	Pongo_abelii
ENSODEG00000016056	RAB23	100	92.405	ENSPCOG00000028471	RAB23	100	92.405	Propithecus_coquereli
ENSODEG00000016056	RAB23	100	81.857	ENSPVAG00000017693	RAB23	100	81.857	Pteropus_vampyrus
ENSODEG00000016056	RAB23	99	81.356	ENSPNYG00000019639	rab23	99	81.356	Pundamilia_nyererei
ENSODEG00000016056	RAB23	99	83.898	ENSPNAG00000024728	rab23	99	83.898	Pygocentrus_nattereri
ENSODEG00000016056	RAB23	100	89.451	ENSRNOG00000012629	Rab23	100	89.451	Rattus_norvegicus
ENSODEG00000016056	RAB23	100	88.430	ENSRBIG00000030547	RAB23	100	88.430	Rhinopithecus_bieti
ENSODEG00000016056	RAB23	100	93.249	ENSRROG00000035920	RAB23	100	93.249	Rhinopithecus_roxellana
ENSODEG00000016056	RAB23	100	92.405	ENSSBOG00000033237	RAB23	100	92.405	Saimiri_boliviensis_boliviensis
ENSODEG00000016056	RAB23	100	90.295	ENSSHAG00000006379	RAB23	100	90.295	Sarcophilus_harrisii
ENSODEG00000016056	RAB23	99	83.761	ENSSFOG00015012604	rab23	99	83.761	Scleropages_formosus
ENSODEG00000016056	RAB23	99	81.780	ENSSMAG00000006341	rab23	99	81.780	Scophthalmus_maximus
ENSODEG00000016056	RAB23	99	81.780	ENSSDUG00000023508	rab23	99	81.780	Seriola_dumerili
ENSODEG00000016056	RAB23	99	81.780	ENSSLDG00000000287	rab23	99	81.780	Seriola_lalandi_dorsalis
ENSODEG00000016056	RAB23	100	91.561	ENSSARG00000013689	RAB23	100	91.561	Sorex_araneus
ENSODEG00000016056	RAB23	100	88.608	ENSSPUG00000006274	RAB23	100	88.608	Sphenodon_punctatus
ENSODEG00000016056	RAB23	99	82.203	ENSSPAG00000010373	rab23	99	82.203	Stegastes_partitus
ENSODEG00000016056	RAB23	100	89.873	ENSSSCG00000029539	RAB23	100	89.873	Sus_scrofa
ENSODEG00000016056	RAB23	100	85.654	ENSTGUG00000012794	RAB23	100	85.654	Taeniopygia_guttata
ENSODEG00000016056	RAB23	99	79.661	ENSTRUG00000015697	rab23	99	79.661	Takifugu_rubripes
ENSODEG00000016056	RAB23	99	80.932	ENSTNIG00000016575	rab23	99	80.932	Tetraodon_nigroviridis
ENSODEG00000016056	RAB23	100	92.405	ENSUAMG00000013367	RAB23	100	92.405	Ursus_americanus
ENSODEG00000016056	RAB23	100	92.405	ENSUMAG00000018629	RAB23	100	92.405	Ursus_maritimus
ENSODEG00000016056	RAB23	81	66.492	ENSVPAG00000006805	RAB23	100	66.492	Vicugna_pacos
ENSODEG00000016056	RAB23	100	92.405	ENSVVUG00000008535	RAB23	100	92.405	Vulpes_vulpes
ENSODEG00000016056	RAB23	99	78.903	ENSXETG00000004449	rab23	99	78.903	Xenopus_tropicalis
ENSODEG00000016056	RAB23	99	80.085	ENSXCOG00000011864	rab23	99	80.085	Xiphophorus_couchianus
ENSODEG00000016056	RAB23	99	80.508	ENSXMAG00000009387	rab23	99	80.508	Xiphophorus_maculatus