EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016065 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 791 bases
Position: chrJH651533.1:3400137-3400927
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000021848	LSM	PF01423.22	5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022108	-	669	-	ENSODEP00000021848	222 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016065	-	87	86.957	ENSODEG00000013478	-	98	81.624
ENSODEG00000016065	-	87	86.957	ENSODEG00000019708	-	93	79.039
ENSODEG00000016065	-	73	83.230	ENSODEG00000016060	-	97	76.923
ENSODEG00000016065	-	73	88.820	ENSODEG00000004305	-	98	74.786
ENSODEG00000016065	-	87	86.957	ENSODEG00000020110	-	98	81.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016065	-	87	86.473	ENSG00000128739	SNRPN	95	92.547	Homo_sapiens
ENSODEG00000016065	-	87	82.609	ENSAMEG00000007034	SNRPN	96	81.624	Ailuropoda_melanoleuca
ENSODEG00000016065	-	87	86.473	ENSANAG00000034241	SNRPN	98	81.197	Aotus_nancymaae
ENSODEG00000016065	-	87	83.092	ENSBTAG00000008251	SNRPN	99	81.900	Bos_taurus
ENSODEG00000016065	-	87	85.990	ENSCJAG00000042622	-	92	78.166	Callithrix_jacchus
ENSODEG00000016065	-	87	86.473	ENSCJAG00000003759	-	98	81.197	Callithrix_jacchus
ENSODEG00000016065	-	87	82.609	ENSCAFG00000010127	SNRPN	98	81.624	Canis_familiaris
ENSODEG00000016065	-	87	82.609	ENSCAFG00020024075	SNRPN	98	81.624	Canis_lupus_dingo
ENSODEG00000016065	-	87	83.092	ENSCHIG00000017477	SNRPN	98	82.051	Capra_hircus
ENSODEG00000016065	-	87	86.473	ENSTSYG00000005248	SNRPN	98	81.197	Carlito_syrichta
ENSODEG00000016065	-	87	86.473	ENSCAPG00000003047	SNRPN	98	81.197	Cavia_aperea
ENSODEG00000016065	-	87	86.473	ENSCPOG00000020270	SNRPN	98	81.197	Cavia_porcellus
ENSODEG00000016065	-	87	86.473	ENSCCAG00000024231	SNRPN	98	81.197	Cebus_capucinus
ENSODEG00000016065	-	87	86.473	ENSCATG00000032518	SNRPN	98	81.197	Cercocebus_atys
ENSODEG00000016065	-	87	86.473	ENSCLAG00000011376	SNRPN	98	81.197	Chinchilla_lanigera
ENSODEG00000016065	-	87	86.473	ENSCSAG00000006406	SNRPN	98	81.197	Chlorocebus_sabaeus
ENSODEG00000016065	-	87	86.473	ENSCHOG00000001846	SNRPN	88	82.051	Choloepus_hoffmanni
ENSODEG00000016065	-	87	86.473	ENSCANG00000041156	SNRPN	98	81.197	Colobus_angolensis_palliatus
ENSODEG00000016065	-	87	85.990	ENSCGRG00001004136	Snrpn	98	81.624	Cricetulus_griseus_chok1gshd
ENSODEG00000016065	-	73	92.547	ENSCGRG00000001621	Snrpn	98	80.769	Cricetulus_griseus_crigri
ENSODEG00000016065	-	64	90.071	ENSCVAG00000014193	SNRPN	96	75.000	Cyprinodon_variegatus
ENSODEG00000016065	-	73	92.547	ENSDNOG00000037060	SNRPN	96	81.624	Dasypus_novemcinctus
ENSODEG00000016065	-	87	86.957	ENSDORG00000004527	Snrpn	98	81.624	Dipodomys_ordii
ENSODEG00000016065	-	87	82.609	ENSEASG00005017871	SNRPN	98	81.624	Equus_asinus_asinus
ENSODEG00000016065	-	87	82.609	ENSECAG00000018148	SNRPN	98	81.624	Equus_caballus
ENSODEG00000016065	-	87	82.126	ENSEEUG00000007440	-	98	81.197	Erinaceus_europaeus
ENSODEG00000016065	-	87	82.609	ENSFCAG00000022298	-	98	81.624	Felis_catus
ENSODEG00000016065	-	76	80.791	ENSFDAG00000010528	-	100	75.122	Fukomys_damarensis
ENSODEG00000016065	-	87	86.957	ENSFDAG00000016578	-	98	81.624	Fukomys_damarensis
ENSODEG00000016065	-	78	67.630	ENSGMOG00000018161	SNRPN	97	59.649	Gadus_morhua
ENSODEG00000016065	-	87	86.473	ENSGGOG00000003988	SNRPN	98	81.197	Gorilla_gorilla
ENSODEG00000016065	-	90	69.849	ENSGGOG00000024469	-	69	79.562	Gorilla_gorilla
ENSODEG00000016065	-	88	78.462	ENSHGLG00000020936	-	97	73.778	Heterocephalus_glaber_female
ENSODEG00000016065	-	87	77.941	ENSHGLG00000019812	-	97	73.932	Heterocephalus_glaber_female
ENSODEG00000016065	-	99	74.786	ENSHGLG00000002327	-	97	74.786	Heterocephalus_glaber_female
ENSODEG00000016065	-	87	86.473	ENSHGLG00000011924	SNRPN	98	81.197	Heterocephalus_glaber_female
ENSODEG00000016065	-	87	86.473	ENSHGLG00100016559	SNRPN	98	81.197	Heterocephalus_glaber_male
ENSODEG00000016065	-	87	77.941	ENSHGLG00100021056	-	97	73.932	Heterocephalus_glaber_male
ENSODEG00000016065	-	99	70.815	ENSHGLG00100004881	-	97	73.932	Heterocephalus_glaber_male
ENSODEG00000016065	-	87	86.473	ENSSTOG00000001339	SNRPN	98	81.197	Ictidomys_tridecemlineatus
ENSODEG00000016065	-	87	86.957	ENSLAFG00000009458	SNRPN	98	81.624	Loxodonta_africana
ENSODEG00000016065	-	87	86.473	ENSMFAG00000042235	SNRPN	98	81.197	Macaca_fascicularis
ENSODEG00000016065	-	87	86.473	ENSMMUG00000023139	SNURF	98	81.197	Macaca_mulatta
ENSODEG00000016065	-	87	86.473	ENSMNEG00000031291	SNRPN	98	81.197	Macaca_nemestrina
ENSODEG00000016065	-	87	86.473	ENSMLEG00000038837	SNRPN	98	81.197	Mandrillus_leucophaeus
ENSODEG00000016065	-	68	89.474	ENSMGAG00000008696	SNRPN	94	76.444	Meleagris_gallopavo
ENSODEG00000016065	-	87	86.473	ENSMAUG00000000051	Snrpn	98	81.197	Mesocricetus_auratus
ENSODEG00000016065	-	87	86.473	ENSMICG00000042356	SNRPN	98	81.197	Microcebus_murinus
ENSODEG00000016065	-	87	86.473	ENSMOCG00000015350	Snrpn	99	81.197	Microtus_ochrogaster
ENSODEG00000016065	-	73	90.683	ENSMODG00000013926	-	98	82.479	Monodelphis_domestica
ENSODEG00000016065	-	87	86.473	MGP_CAROLIEiJ_G0029815	Snrpn	98	81.197	Mus_caroli
ENSODEG00000016065	-	87	86.473	ENSMUSG00000102252	Snrpn	98	81.197	Mus_musculus
ENSODEG00000016065	-	87	86.473	MGP_PahariEiJ_G0013040	Snrpn	98	81.197	Mus_pahari
ENSODEG00000016065	-	87	86.473	MGP_SPRETEiJ_G0030918	Snrpn	98	81.197	Mus_spretus
ENSODEG00000016065	-	83	54.054	ENSMPUG00000007115	-	60	70.543	Mustela_putorius_furo
ENSODEG00000016065	-	87	82.609	ENSMPUG00000014638	-	98	81.624	Mustela_putorius_furo
ENSODEG00000016065	-	95	62.857	ENSMLUG00000024428	-	52	68.421	Myotis_lucifugus
ENSODEG00000016065	-	87	83.092	ENSMLUG00000023361	-	96	81.197	Myotis_lucifugus
ENSODEG00000016065	-	86	63.684	ENSMLUG00000025849	-	100	63.721	Myotis_lucifugus
ENSODEG00000016065	-	87	86.473	ENSNGAG00000000181	Snrpn	98	81.197	Nannospalax_galili
ENSODEG00000016065	-	87	68.599	ENSNLEG00000001376	SNRPN	79	92.857	Nomascus_leucogenys
ENSODEG00000016065	-	87	86.058	ENSOCUG00000003532	-	98	80.426	Oryctolagus_cuniculus
ENSODEG00000016065	-	79	82.386	ENSORLG00020007490	SNRPN	96	74.569	Oryzias_latipes_hni
ENSODEG00000016065	-	79	82.386	ENSORLG00015003332	SNRPN	96	74.569	Oryzias_latipes_hsok
ENSODEG00000016065	-	79	82.955	ENSOMEG00000002066	SNRPN	96	75.000	Oryzias_melastigma
ENSODEG00000016065	-	87	86.473	ENSOGAG00000007392	SNRPN	98	81.197	Otolemur_garnettii
ENSODEG00000016065	-	87	83.092	ENSOARG00000009080	SNRPN	98	82.051	Ovis_aries
ENSODEG00000016065	-	87	86.473	ENSPPAG00000027650	SNRPN	98	81.197	Pan_paniscus
ENSODEG00000016065	-	91	70.588	ENSPPAG00000034049	-	91	65.909	Pan_paniscus
ENSODEG00000016065	-	87	82.609	ENSPPRG00000019878	-	98	81.624	Panthera_pardus
ENSODEG00000016065	-	86	64.583	ENSPPRG00000006957	-	72	68.667	Panthera_pardus
ENSODEG00000016065	-	87	82.126	ENSPTIG00000004537	SNRPN	98	81.197	Panthera_tigris_altaica
ENSODEG00000016065	-	91	70.098	ENSPTRG00000052400	-	91	65.455	Pan_troglodytes
ENSODEG00000016065	-	87	86.473	ENSPTRG00000006826	SNRPN	98	81.197	Pan_troglodytes
ENSODEG00000016065	-	87	86.473	ENSPANG00000020142	SNRPN	98	81.197	Papio_anubis
ENSODEG00000016065	-	87	86.473	ENSPEMG00000012911	-	98	81.197	Peromyscus_maniculatus_bairdii
ENSODEG00000016065	-	73	89.441	ENSPEMG00000020979	-	98	77.350	Peromyscus_maniculatus_bairdii
ENSODEG00000016065	-	87	73.913	ENSPEMG00000013920	-	97	72.222	Peromyscus_maniculatus_bairdii
ENSODEG00000016065	-	73	90.683	ENSPCIG00000004699	-	75	78.205	Phascolarctos_cinereus
ENSODEG00000016065	-	65	89.583	ENSPMEG00000020674	SNRPN	98	74.348	Poecilia_mexicana
ENSODEG00000016065	-	87	86.473	ENSPPYG00000006269	SNURF	98	81.197	Pongo_abelii
ENSODEG00000016065	-	87	86.473	ENSPCOG00000014231	SNRPN	98	81.197	Propithecus_coquereli
ENSODEG00000016065	-	87	86.473	ENSRNOG00000059764	Snrpn	98	81.197	Rattus_norvegicus
ENSODEG00000016065	-	87	86.473	ENSRBIG00000041765	SNRPN	98	81.197	Rhinopithecus_bieti
ENSODEG00000016065	-	87	86.473	ENSRROG00000035157	SNRPN	98	81.197	Rhinopithecus_roxellana
ENSODEG00000016065	-	87	78.404	ENSSBOG00000024929	-	98	81.197	Saimiri_boliviensis_boliviensis
ENSODEG00000016065	-	87	86.473	ENSSBOG00000000110	-	98	81.197	Saimiri_boliviensis_boliviensis
ENSODEG00000016065	-	73	90.683	ENSSHAG00000010257	-	96	78.205	Sarcophilus_harrisii
ENSODEG00000016065	-	87	59.903	ENSSARG00000000072	SNRPN	98	60.684	Sorex_araneus
ENSODEG00000016065	-	87	83.092	ENSSSCG00000028124	SNRPN	100	81.034	Sus_scrofa
ENSODEG00000016065	-	87	83.092	ENSTTRG00000010966	SNRPN	86	82.051	Tursiops_truncatus
ENSODEG00000016065	-	87	82.609	ENSUAMG00000016284	SNRPN	78	81.614	Ursus_americanus
ENSODEG00000016065	-	87	82.609	ENSUMAG00000025589	SNRPN	98	81.624	Ursus_maritimus
ENSODEG00000016065	-	87	82.609	ENSVVUG00000017971	SNRPN	91	81.614	Vulpes_vulpes