EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000016218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 39771 bases
Position: chrJH651516.1:26787214-26826984
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022076	RRM_1	PF00076.22	4.8e-08	1	1
ENSODEP00000022075	RRM_1	PF00076.22	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022336	-	2080	-	ENSODEP00000022075	132 (aa)	-	-
ENSODET00000022337	-	312	-	ENSODEP00000022076	103 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016218	-	79	72.840	ENSG00000116754	SRSF11	75	70.103	Homo_sapiens
ENSODEG00000016218	-	100	96.970	ENSG00000153914	SREK1	100	96.970	Homo_sapiens
ENSODEG00000016218	-	82	67.857	ENSAPOG00000004488	-	78	69.048	Acanthochromis_polyacanthus
ENSODEG00000016218	-	79	71.605	ENSAPOG00000007244	-	59	71.951	Acanthochromis_polyacanthus
ENSODEG00000016218	-	87	83.333	ENSACIG00000015055	-	95	73.950	Amphilophus_citrinellus
ENSODEG00000016218	-	83	68.605	ENSACIG00000012348	-	92	70.115	Amphilophus_citrinellus
ENSODEG00000016218	-	82	67.857	ENSACIG00000018075	-	78	69.048	Amphilophus_citrinellus
ENSODEG00000016218	-	83	85.882	ENSAOCG00000024368	-	82	88.889	Amphiprion_ocellaris
ENSODEG00000016218	-	77	70.886	ENSAOCG00000000739	-	87	69.512	Amphiprion_ocellaris
ENSODEG00000016218	-	82	67.857	ENSAPEG00000003619	SRSF11	78	69.048	Amphiprion_percula
ENSODEG00000016218	-	80	70.732	ENSAPEG00000003142	SRSF11	86	71.084	Amphiprion_percula
ENSODEG00000016218	-	83	86.047	ENSAPEG00000002218	-	89	89.024	Amphiprion_percula
ENSODEG00000016218	-	81	71.084	ENSATEG00000011691	srsf11	81	70.455	Anabas_testudineus
ENSODEG00000016218	-	79	90.123	ENSATEG00000009464	-	89	90.123	Anabas_testudineus
ENSODEG00000016218	-	82	67.857	ENSATEG00000007534	-	78	69.048	Anabas_testudineus
ENSODEG00000016218	-	98	93.077	ENSANAG00000031358	SREK1	99	94.949	Aotus_nancymaae
ENSODEG00000016218	-	79	71.605	ENSACLG00000000623	srsf11	89	68.966	Astatotilapia_calliptera
ENSODEG00000016218	-	96	97.980	ENSBTAG00000007321	SREK1	99	97.980	Bos_taurus
ENSODEG00000016218	-	96	94.949	ENSCJAG00000015950	SREK1	99	94.949	Callithrix_jacchus
ENSODEG00000016218	-	79	72.840	ENSCAFG00020017255	-	75	71.765	Canis_lupus_dingo
ENSODEG00000016218	-	100	96.970	ENSCAFG00020019449	-	100	96.970	Canis_lupus_dingo
ENSODEG00000016218	-	96	97.980	ENSCHIG00000025052	-	99	97.980	Capra_hircus
ENSODEG00000016218	-	79	72.840	ENSCHIG00000025295	SRSF11	72	71.765	Capra_hircus
ENSODEG00000016218	-	79	70.370	ENSTSYG00000033270	-	66	63.830	Carlito_syrichta
ENSODEG00000016218	-	100	97.727	ENSTSYG00000036957	SREK1	100	97.727	Carlito_syrichta
ENSODEG00000016218	-	98	93.077	ENSCCAG00000020591	SREK1	99	94.949	Cebus_capucinus
ENSODEG00000016218	-	96	96.970	ENSCATG00000031482	SREK1	99	96.970	Cercocebus_atys
ENSODEG00000016218	-	100	89.394	ENSCPBG00000026866	SREK1	89	93.103	Chrysemys_picta_bellii
ENSODEG00000016218	-	83	65.882	ENSCPBG00000022430	-	88	56.522	Chrysemys_picta_bellii
ENSODEG00000016218	-	96	96.970	ENSCANG00000030421	SREK1	99	96.970	Colobus_angolensis_palliatus
ENSODEG00000016218	-	95	79.592	ENSCSEG00000013934	-	95	83.721	Cynoglossus_semilaevis
ENSODEG00000016218	-	83	87.059	ENSCVAG00000002404	-	95	74.359	Cyprinodon_variegatus
ENSODEG00000016218	-	82	67.857	ENSDARG00000098574	srsf11	95	69.767	Danio_rerio
ENSODEG00000016218	-	100	96.970	ENSDORG00000023160	-	100	96.970	Dipodomys_ordii
ENSODEG00000016218	-	79	72.840	ENSEASG00005007847	SRSF11	75	71.765	Equus_asinus_asinus
ENSODEG00000016218	-	100	97.727	ENSEASG00005006832	-	100	97.727	Equus_asinus_asinus
ENSODEG00000016218	-	100	97.727	ENSECAG00000035731	-	100	97.727	Equus_caballus
ENSODEG00000016218	-	82	98.810	ENSFCAG00000036884	-	99	95.960	Felis_catus
ENSODEG00000016218	-	79	72.840	ENSFCAG00000034448	-	76	70.103	Felis_catus
ENSODEG00000016218	-	84	85.057	ENSFHEG00000020959	-	93	69.672	Fundulus_heteroclitus
ENSODEG00000016218	-	96	86.869	ENSGALG00000043541	SREK1	84	91.566	Gallus_gallus
ENSODEG00000016218	-	83	88.235	ENSGAFG00000001732	-	95	73.276	Gambusia_affinis
ENSODEG00000016218	-	79	74.074	ENSGAGG00000022411	-	93	71.134	Gopherus_agassizii
ENSODEG00000016218	-	100	89.394	ENSGAGG00000006087	SREK1	89	93.103	Gopherus_agassizii
ENSODEG00000016218	-	100	96.970	ENSGGOG00000004737	SREK1	100	96.970	Gorilla_gorilla
ENSODEG00000016218	-	92	78.947	ENSHBUG00000007082	-	87	72.650	Haplochromis_burtoni
ENSODEG00000016218	-	79	86.420	ENSHCOG00000017228	-	75	86.420	Hippocampus_comes
ENSODEG00000016218	-	79	71.605	ENSHCOG00000016860	-	84	71.951	Hippocampus_comes
ENSODEG00000016218	-	96	96.970	ENSSTOG00000008850	SREK1	99	96.970	Ictidomys_tridecemlineatus
ENSODEG00000016218	-	98	96.124	ENSJJAG00000008846	-	100	96.124	Jaculus_jaculus
ENSODEG00000016218	-	79	71.605	ENSLBEG00000024167	srsf11	84	71.951	Labrus_bergylta
ENSODEG00000016218	-	88	82.418	ENSLBEG00000022954	-	89	71.545	Labrus_bergylta
ENSODEG00000016218	-	100	96.970	ENSMFAG00000039823	SREK1	100	96.970	Macaca_fascicularis
ENSODEG00000016218	-	95	96.939	ENSMMUG00000014586	SREK1	90	96.939	Macaca_mulatta
ENSODEG00000016218	-	96	96.970	ENSMNEG00000030723	SREK1	99	96.970	Macaca_nemestrina
ENSODEG00000016218	-	96	96.970	ENSMLEG00000039078	SREK1	99	96.970	Mandrillus_leucophaeus
ENSODEG00000016218	-	79	70.370	ENSMAMG00000015002	-	79	69.048	Mastacembelus_armatus
ENSODEG00000016218	-	83	88.235	ENSMAMG00000003099	-	79	91.358	Mastacembelus_armatus
ENSODEG00000016218	-	84	80.899	ENSMZEG00005005707	-	88	73.214	Maylandia_zebra
ENSODEG00000016218	-	96	98.990	ENSMICG00000034959	SREK1	99	98.990	Microcebus_murinus
ENSODEG00000016218	-	79	70.370	ENSMMOG00000008877	-	80	70.370	Mola_mola
ENSODEG00000016218	-	82	67.857	ENSMMOG00000016751	-	78	69.048	Mola_mola
ENSODEG00000016218	-	83	87.209	ENSMALG00000017086	srek1	92	90.244	Monopterus_albus
ENSODEG00000016218	-	79	70.370	ENSMALG00000016608	srsf11	86	69.048	Monopterus_albus
ENSODEG00000016218	-	79	72.840	MGP_CAROLIEiJ_G0025767	Srsf11	96	70.103	Mus_caroli
ENSODEG00000016218	-	79	72.840	ENSMUSG00000055436	Srsf11	95	70.103	Mus_musculus
ENSODEG00000016218	-	79	72.840	MGP_PahariEiJ_G0027217	Srsf11	96	70.103	Mus_pahari
ENSODEG00000016218	-	79	72.840	MGP_SPRETEiJ_G0026719	Srsf11	96	70.103	Mus_spretus
ENSODEG00000016218	-	100	96.970	ENSNGAG00000014631	-	100	96.970	Nannospalax_galili
ENSODEG00000016218	-	83	68.605	ENSNBRG00000020213	-	92	70.115	Neolamprologus_brichardi
ENSODEG00000016218	-	92	78.947	ENSNBRG00000010656	-	87	72.650	Neolamprologus_brichardi
ENSODEG00000016218	-	96	96.970	ENSNLEG00000003827	SREK1	99	96.970	Nomascus_leucogenys
ENSODEG00000016218	-	82	67.857	ENSORLG00000030366	-	75	69.048	Oryzias_latipes
ENSODEG00000016218	-	78	86.250	ENSORLG00000002711	-	69	86.747	Oryzias_latipes
ENSODEG00000016218	-	79	87.654	ENSORLG00020012815	-	87	75.214	Oryzias_latipes_hni
ENSODEG00000016218	-	82	67.857	ENSORLG00020009393	-	75	69.048	Oryzias_latipes_hni
ENSODEG00000016218	-	91	79.787	ENSORLG00015020455	-	91	75.214	Oryzias_latipes_hsok
ENSODEG00000016218	-	82	67.857	ENSORLG00015009374	-	75	69.048	Oryzias_latipes_hsok
ENSODEG00000016218	-	100	96.970	ENSPPAG00000031605	SREK1	100	96.970	Pan_paniscus
ENSODEG00000016218	-	82	98.810	ENSPPRG00000024617	SREK1	99	95.960	Panthera_pardus
ENSODEG00000016218	-	82	98.810	ENSPTIG00000006608	SREK1	99	95.960	Panthera_tigris_altaica
ENSODEG00000016218	-	100	96.970	ENSPTRG00000016936	SREK1	100	96.970	Pan_troglodytes
ENSODEG00000016218	-	100	96.970	ENSPANG00000008953	SREK1	100	96.970	Papio_anubis
ENSODEG00000016218	-	83	70.588	ENSPKIG00000021576	-	94	71.910	Paramormyrops_kingsleyae
ENSODEG00000016218	-	83	85.882	ENSPMGG00000017029	-	70	88.889	Periophthalmus_magnuspinnatus
ENSODEG00000016218	-	79	71.605	ENSPMGG00000000954	-	88	65.591	Periophthalmus_magnuspinnatus
ENSODEG00000016218	-	95	61.000	ENSPMGG00000005045	-	77	64.773	Periophthalmus_magnuspinnatus
ENSODEG00000016218	-	90	81.250	ENSPLAG00000008818	-	85	72.414	Poecilia_latipinna
ENSODEG00000016218	-	90	81.250	ENSPLAG00000014609	-	85	72.414	Poecilia_latipinna
ENSODEG00000016218	-	82	67.857	ENSPLAG00000009484	-	58	69.048	Poecilia_latipinna
ENSODEG00000016218	-	82	67.857	ENSPMEG00000023453	-	58	69.048	Poecilia_mexicana
ENSODEG00000016218	-	79	71.605	ENSPMEG00000018837	srsf11	70	70.588	Poecilia_mexicana
ENSODEG00000016218	-	90	81.250	ENSPMEG00000006824	-	85	72.414	Poecilia_mexicana
ENSODEG00000016218	-	90	81.250	ENSPMEG00000006607	-	85	72.414	Poecilia_mexicana
ENSODEG00000016218	-	83	88.235	ENSPREG00000019922	-	95	77.500	Poecilia_reticulata
ENSODEG00000016218	-	100	97.727	ENSPCOG00000026230	SREK1	100	97.727	Propithecus_coquereli
ENSODEG00000016218	-	92	78.947	ENSPNYG00000007178	-	87	72.650	Pundamilia_nyererei
ENSODEG00000016218	-	79	72.840	ENSRBIG00000042971	SRSF11	65	71.429	Rhinopithecus_bieti
ENSODEG00000016218	-	100	96.970	ENSRBIG00000033818	SREK1	100	96.970	Rhinopithecus_bieti
ENSODEG00000016218	-	96	96.970	ENSRROG00000017210	SREK1	99	96.970	Rhinopithecus_roxellana
ENSODEG00000016218	-	100	92.424	ENSSBOG00000031230	SREK1	99	94.949	Saimiri_boliviensis_boliviensis
ENSODEG00000016218	-	79	72.840	ENSSBOG00000033461	SRSF11	65	71.429	Saimiri_boliviensis_boliviensis
ENSODEG00000016218	-	89	68.478	ENSSFOG00015016086	-	70	72.727	Scleropages_formosus
ENSODEG00000016218	-	83	87.059	ENSSDUG00000010395	-	80	90.123	Seriola_dumerili
ENSODEG00000016218	-	79	71.605	ENSSLDG00000015477	-	84	71.951	Seriola_lalandi_dorsalis
ENSODEG00000016218	-	83	87.059	ENSSLDG00000016285	-	80	90.123	Seriola_lalandi_dorsalis
ENSODEG00000016218	-	82	67.857	ENSSLDG00000012105	-	78	69.048	Seriola_lalandi_dorsalis
ENSODEG00000016218	-	79	70.370	ENSSPAG00000016483	-	76	62.105	Stegastes_partitus
ENSODEG00000016218	-	83	85.882	ENSSPAG00000022310	-	82	88.889	Stegastes_partitus
ENSODEG00000016218	-	87	80.000	ENSTRUG00000022058	-	95	72.650	Takifugu_rubripes
ENSODEG00000016218	-	95	96.939	ENSUAMG00000022662	-	90	96.939	Ursus_americanus
ENSODEG00000016218	-	79	72.840	ENSUAMG00000008403	-	65	71.429	Ursus_americanus
ENSODEG00000016218	-	100	96.970	ENSVVUG00000005888	-	100	96.970	Vulpes_vulpes
ENSODEG00000016218	-	87	70.000	ENSXCOG00000003220	-	71	73.171	Xiphophorus_couchianus
ENSODEG00000016218	-	95	79.592	ENSXCOG00000017792	-	91	73.276	Xiphophorus_couchianus
ENSODEG00000016218	-	79	70.370	ENSXCOG00000015127	-	90	69.048	Xiphophorus_couchianus
ENSODEG00000016218	-	83	88.235	ENSXMAG00000028210	-	95	73.276	Xiphophorus_maculatus
ENSODEG00000016218	-	82	67.857	ENSXMAG00000019180	SRSF11	56	69.048	Xiphophorus_maculatus