EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016254 (Gene tree)
Gene ID: 101589089
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 5
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2666 bases
Position: chrJH651533.1:13011286-13013951
Accession: 101589089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022130	zf-RanBP	PF00641.18	8.6e-10	1	1
ENSODEP00000022130	RRM_1	PF00076.22	1.4e-14	1	1
ENSODEP00000022130	G-patch	PF01585.23	4.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022391	-	2587	XM_004627043	ENSODEP00000022130	813 (aa)	XP_004627100	UPI000333722F

Gene Model

Click here to download ENSODEG00000016254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016254	-	98	50.927	ENSODEG00000008955	RBM10	95	52.798
ENSODEG00000016254	-	100	92.005	ENSODEG00000019111	-	100	92.005

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016254	-	100	98.773	ENSG00000003756	RBM5	100	100.000	Homo_sapiens
ENSODEG00000016254	-	100	60.308	ENSAPOG00000006011	-	100	60.761	Acanthochromis_polyacanthus
ENSODEG00000016254	-	100	62.197	ENSAPOG00000016625	rbm5	100	62.165	Acanthochromis_polyacanthus
ENSODEG00000016254	-	100	98.896	ENSAMEG00000012005	RBM5	100	98.896	Ailuropoda_melanoleuca
ENSODEG00000016254	-	76	59.746	ENSACIG00000007571	rbm5	97	69.841	Amphilophus_citrinellus
ENSODEG00000016254	-	99	58.525	ENSACIG00000021310	-	99	56.953	Amphilophus_citrinellus
ENSODEG00000016254	-	99	59.853	ENSAOCG00000017312	-	99	59.512	Amphiprion_ocellaris
ENSODEG00000016254	-	100	61.795	ENSAOCG00000002880	rbm5	100	61.761	Amphiprion_ocellaris
ENSODEG00000016254	-	100	60.782	ENSAPEG00000018222	RBM5	100	60.761	Amphiprion_percula
ENSODEG00000016254	-	90	60.510	ENSAPEG00000011862	rbm5	92	61.361	Amphiprion_percula
ENSODEG00000016254	-	100	61.601	ENSATEG00000024663	rbm5	100	61.772	Anabas_testudineus
ENSODEG00000016254	-	100	59.463	ENSATEG00000003838	-	100	57.778	Anabas_testudineus
ENSODEG00000016254	-	94	87.304	ENSAPLG00000011176	RBM5	99	86.412	Anas_platyrhynchos
ENSODEG00000016254	-	100	84.772	ENSACAG00000008580	RBM5	100	85.234	Anolis_carolinensis
ENSODEG00000016254	-	100	98.773	ENSANAG00000025199	RBM5	100	98.773	Aotus_nancymaae
ENSODEG00000016254	-	89	75.610	ENSACLG00000024198	RBM5	100	56.958	Astatotilapia_calliptera
ENSODEG00000016254	-	100	61.609	ENSACLG00000012748	rbm5	100	61.799	Astatotilapia_calliptera
ENSODEG00000016254	-	84	63.411	ENSAMXG00000008146	rbm5	99	64.236	Astyanax_mexicanus
ENSODEG00000016254	-	100	98.405	ENSBTAG00000006330	RBM5	100	98.405	Bos_taurus
ENSODEG00000016254	-	100	98.773	ENSCJAG00000004740	RBM5	100	98.773	Callithrix_jacchus
ENSODEG00000016254	-	100	99.018	ENSCAFG00000010866	RBM5	100	99.018	Canis_familiaris
ENSODEG00000016254	-	100	99.018	ENSCAFG00020022126	RBM5	100	99.018	Canis_lupus_dingo
ENSODEG00000016254	-	100	98.650	ENSCHIG00000018435	RBM5	100	98.650	Capra_hircus
ENSODEG00000016254	-	86	97.851	ENSTSYG00000004158	RBM5	100	97.851	Carlito_syrichta
ENSODEG00000016254	-	99	81.673	ENSCAPG00000013495	RBM5	100	80.713	Cavia_aperea
ENSODEG00000016254	-	100	99.508	ENSCPOG00000008151	RBM5	100	99.508	Cavia_porcellus
ENSODEG00000016254	-	99	98.889	ENSCCAG00000026401	RBM5	99	98.889	Cebus_capucinus
ENSODEG00000016254	-	100	98.896	ENSCATG00000041038	RBM5	100	98.896	Cercocebus_atys
ENSODEG00000016254	-	100	99.631	ENSCLAG00000007873	RBM5	100	99.631	Chinchilla_lanigera
ENSODEG00000016254	-	100	98.896	ENSCSAG00000014401	RBM5	100	98.896	Chlorocebus_sabaeus
ENSODEG00000016254	-	81	85.477	ENSCHOG00000009429	RBM5	85	86.989	Choloepus_hoffmanni
ENSODEG00000016254	-	100	86.490	ENSCPBG00000002406	RBM5	100	87.334	Chrysemys_picta_bellii
ENSODEG00000016254	-	100	96.442	ENSCANG00000031250	RBM5	100	96.442	Colobus_angolensis_palliatus
ENSODEG00000016254	-	100	97.914	ENSCGRG00001010543	Rbm5	100	97.914	Cricetulus_griseus_chok1gshd
ENSODEG00000016254	-	100	97.914	ENSCGRG00000008475	Rbm5	100	97.914	Cricetulus_griseus_crigri
ENSODEG00000016254	-	98	59.839	ENSCSEG00000000596	rbm5	97	59.836	Cynoglossus_semilaevis
ENSODEG00000016254	-	100	60.673	ENSCVAG00000005655	rbm5	100	61.422	Cyprinodon_variegatus
ENSODEG00000016254	-	100	58.087	ENSDARG00000098280	rbm5	100	63.245	Danio_rerio
ENSODEG00000016254	-	100	98.773	ENSDNOG00000011756	RBM5	100	98.773	Dasypus_novemcinctus
ENSODEG00000016254	-	100	98.773	ENSDORG00000007692	Rbm5	100	98.773	Dipodomys_ordii
ENSODEG00000016254	-	92	91.600	ENSETEG00000012773	RBM5	93	91.667	Echinops_telfairi
ENSODEG00000016254	-	94	47.294	ENSEBUG00000017034	rbm5	79	63.636	Eptatretus_burgeri
ENSODEG00000016254	-	100	99.141	ENSEASG00005011835	RBM5	100	99.141	Equus_asinus_asinus
ENSODEG00000016254	-	100	99.141	ENSECAG00000020447	RBM5	100	99.141	Equus_caballus
ENSODEG00000016254	-	90	98.515	ENSEEUG00000005943	RBM5	91	98.515	Erinaceus_europaeus
ENSODEG00000016254	-	100	63.857	ENSELUG00000022467	rbm5	100	61.298	Esox_lucius
ENSODEG00000016254	-	100	98.896	ENSFCAG00000014639	RBM5	100	98.896	Felis_catus
ENSODEG00000016254	-	98	82.847	ENSFALG00000008828	RBM5	83	86.675	Ficedula_albicollis
ENSODEG00000016254	-	100	96.069	ENSFDAG00000001897	RBM5	100	96.069	Fukomys_damarensis
ENSODEG00000016254	-	100	61.761	ENSFHEG00000015954	rbm5	100	76.190	Fundulus_heteroclitus
ENSODEG00000016254	-	100	48.795	ENSGMOG00000007810	-	100	47.045	Gadus_morhua
ENSODEG00000016254	-	99	62.545	ENSGMOG00000016224	rbm5	92	62.679	Gadus_morhua
ENSODEG00000016254	-	97	82.169	ENSGALG00000039288	RBM5	83	86.412	Gallus_gallus
ENSODEG00000016254	-	100	60.945	ENSGAFG00000010690	rbm5	100	61.761	Gambusia_affinis
ENSODEG00000016254	-	100	57.820	ENSGACG00000000858	-	100	57.925	Gasterosteus_aculeatus
ENSODEG00000016254	-	100	62.515	ENSGACG00000010469	rbm5	100	61.888	Gasterosteus_aculeatus
ENSODEG00000016254	-	95	86.852	ENSGAGG00000007935	RBM5	99	87.105	Gopherus_agassizii
ENSODEG00000016254	-	100	98.773	ENSGGOG00000014490	RBM5	100	98.773	Gorilla_gorilla
ENSODEG00000016254	-	100	61.117	ENSHBUG00000001941	rbm5	100	61.298	Haplochromis_burtoni
ENSODEG00000016254	-	89	75.610	ENSHBUG00000011901	-	100	56.722	Haplochromis_burtoni
ENSODEG00000016254	-	100	99.509	ENSHGLG00000014844	RBM5	100	99.509	Heterocephalus_glaber_female
ENSODEG00000016254	-	100	99.631	ENSHGLG00100010739	RBM5	100	99.631	Heterocephalus_glaber_male
ENSODEG00000016254	-	100	52.955	ENSHCOG00000004536	-	100	51.877	Hippocampus_comes
ENSODEG00000016254	-	95	58.946	ENSHCOG00000017110	rbm5	99	59.241	Hippocampus_comes
ENSODEG00000016254	-	100	64.387	ENSIPUG00000000640	rbm5	100	64.650	Ictalurus_punctatus
ENSODEG00000016254	-	100	98.405	ENSSTOG00000013856	RBM5	100	98.405	Ictidomys_tridecemlineatus
ENSODEG00000016254	-	100	98.160	ENSJJAG00000008844	Rbm5	100	98.160	Jaculus_jaculus
ENSODEG00000016254	-	100	61.015	ENSKMAG00000006663	rbm5	100	61.475	Kryptolebias_marmoratus
ENSODEG00000016254	-	100	60.505	ENSLBEG00000020858	rbm5	100	61.279	Labrus_bergylta
ENSODEG00000016254	-	59	61.842	ENSLBEG00000002522	-	94	50.764	Labrus_bergylta
ENSODEG00000016254	-	100	57.746	ENSLBEG00000010877	-	94	58.156	Labrus_bergylta
ENSODEG00000016254	-	99	74.303	ENSLACG00000016572	RBM5	100	76.838	Latimeria_chalumnae
ENSODEG00000016254	-	100	65.557	ENSLOCG00000010774	rbm5	100	65.783	Lepisosteus_oculatus
ENSODEG00000016254	-	100	98.652	ENSLAFG00000006733	RBM5	100	98.652	Loxodonta_africana
ENSODEG00000016254	-	100	98.896	ENSMFAG00000031609	RBM5	100	98.896	Macaca_fascicularis
ENSODEG00000016254	-	99	98.889	ENSMMUG00000004921	RBM5	99	98.889	Macaca_mulatta
ENSODEG00000016254	-	100	98.773	ENSMNEG00000044394	RBM5	100	98.773	Macaca_nemestrina
ENSODEG00000016254	-	100	95.332	ENSMLEG00000034689	RBM5	100	95.332	Mandrillus_leucophaeus
ENSODEG00000016254	-	91	76.190	ENSMAMG00000017277	rbm5	99	76.190	Mastacembelus_armatus
ENSODEG00000016254	-	100	62.295	ENSMAMG00000023948	-	100	59.830	Mastacembelus_armatus
ENSODEG00000016254	-	100	57.597	ENSMZEG00005010035	-	100	56.722	Maylandia_zebra
ENSODEG00000016254	-	100	61.609	ENSMZEG00005015328	rbm5	100	61.799	Maylandia_zebra
ENSODEG00000016254	-	93	87.434	ENSMGAG00000003972	RBM5	100	86.508	Meleagris_gallopavo
ENSODEG00000016254	-	99	97.901	ENSMAUG00000020572	Rbm5	98	97.901	Mesocricetus_auratus
ENSODEG00000016254	-	100	98.773	ENSMICG00000016179	RBM5	100	98.773	Microcebus_murinus
ENSODEG00000016254	-	100	97.791	ENSMOCG00000017479	Rbm5	100	97.791	Microtus_ochrogaster
ENSODEG00000016254	-	99	51.582	ENSMMOG00000021804	-	93	53.255	Mola_mola
ENSODEG00000016254	-	100	56.829	ENSMMOG00000015342	rbm5	100	56.694	Mola_mola
ENSODEG00000016254	-	100	94.247	ENSMODG00000012301	RBM5	100	94.247	Monodelphis_domestica
ENSODEG00000016254	-	99	60.949	ENSMALG00000000609	rbm5	99	58.637	Monopterus_albus
ENSODEG00000016254	-	100	58.323	ENSMALG00000016769	-	100	57.449	Monopterus_albus
ENSODEG00000016254	-	100	97.669	MGP_CAROLIEiJ_G0032660	Rbm5	100	99.602	Mus_caroli
ENSODEG00000016254	-	100	97.791	ENSMUSG00000032580	Rbm5	100	99.602	Mus_musculus
ENSODEG00000016254	-	100	98.037	MGP_PahariEiJ_G0015528	Rbm5	100	100.000	Mus_pahari
ENSODEG00000016254	-	100	97.914	MGP_SPRETEiJ_G0033805	Rbm5	100	100.000	Mus_spretus
ENSODEG00000016254	-	100	97.546	ENSMLUG00000007875	RBM5	100	97.546	Myotis_lucifugus
ENSODEG00000016254	-	100	98.037	ENSNGAG00000011777	Rbm5	100	98.037	Nannospalax_galili
ENSODEG00000016254	-	96	58.395	ENSNBRG00000004400	RBM5	95	58.003	Neolamprologus_brichardi
ENSODEG00000016254	-	100	61.003	ENSNBRG00000018097	rbm5	100	61.182	Neolamprologus_brichardi
ENSODEG00000016254	-	100	98.773	ENSNLEG00000006943	RBM5	100	98.773	Nomascus_leucogenys
ENSODEG00000016254	-	99	87.546	ENSMEUG00000012994	RBM5	100	87.793	Notamacropus_eugenii
ENSODEG00000016254	-	92	94.297	ENSOPRG00000015154	RBM5	93	94.297	Ochotona_princeps
ENSODEG00000016254	-	100	59.096	ENSONIG00000019007	RBM5	100	58.244	Oreochromis_niloticus
ENSODEG00000016254	-	100	61.460	ENSONIG00000004107	rbm5	100	61.645	Oreochromis_niloticus
ENSODEG00000016254	-	88	94.258	ENSOANG00000006557	RBM5	100	94.258	Ornithorhynchus_anatinus
ENSODEG00000016254	-	100	97.546	ENSOCUG00000011652	RBM5	100	97.546	Oryctolagus_cuniculus
ENSODEG00000016254	-	100	55.726	ENSORLG00000001053	-	100	55.201	Oryzias_latipes
ENSODEG00000016254	-	95	60.684	ENSORLG00000003369	rbm5	99	59.779	Oryzias_latipes
ENSODEG00000016254	-	95	54.444	ENSORLG00020006782	-	98	53.903	Oryzias_latipes_hni
ENSODEG00000016254	-	100	61.467	ENSORLG00020021744	rbm5	100	60.727	Oryzias_latipes_hni
ENSODEG00000016254	-	91	76.190	ENSORLG00015018379	rbm5	99	76.190	Oryzias_latipes_hsok
ENSODEG00000016254	-	95	54.815	ENSORLG00015002854	-	98	54.275	Oryzias_latipes_hsok
ENSODEG00000016254	-	68	62.500	ENSOMEG00000010653	-	89	62.500	Oryzias_melastigma
ENSODEG00000016254	-	100	61.361	ENSOMEG00000002219	rbm5	100	60.743	Oryzias_melastigma
ENSODEG00000016254	-	93	94.702	ENSOGAG00000004205	RBM5	100	94.702	Otolemur_garnettii
ENSODEG00000016254	-	100	98.650	ENSOARG00000010923	RBM5	100	98.650	Ovis_aries
ENSODEG00000016254	-	100	98.896	ENSPPAG00000043010	RBM5	100	98.896	Pan_paniscus
ENSODEG00000016254	-	100	98.896	ENSPPRG00000005404	RBM5	100	98.896	Panthera_pardus
ENSODEG00000016254	-	100	98.896	ENSPTIG00000000962	RBM5	100	98.896	Panthera_tigris_altaica
ENSODEG00000016254	-	100	98.896	ENSPTRG00000014946	RBM5	100	98.896	Pan_troglodytes
ENSODEG00000016254	-	100	98.896	ENSPANG00000018507	RBM5	100	98.896	Papio_anubis
ENSODEG00000016254	-	100	62.673	ENSPKIG00000024837	RBM5	100	62.341	Paramormyrops_kingsleyae
ENSODEG00000016254	-	76	57.302	ENSPKIG00000019187	-	100	58.571	Paramormyrops_kingsleyae
ENSODEG00000016254	-	88	88.392	ENSPSIG00000016073	RBM5	100	88.392	Pelodiscus_sinensis
ENSODEG00000016254	-	79	74.359	ENSPMGG00000004719	-	99	73.810	Periophthalmus_magnuspinnatus
ENSODEG00000016254	-	79	55.607	ENSPMGG00000017347	rbm5	100	55.453	Periophthalmus_magnuspinnatus
ENSODEG00000016254	-	99	46.448	ENSPMAG00000001998	rbm5	92	45.927	Petromyzon_marinus
ENSODEG00000016254	-	100	94.247	ENSPCIG00000021531	RBM5	100	94.247	Phascolarctos_cinereus
ENSODEG00000016254	-	100	60.850	ENSPLAG00000006318	rbm5	100	61.778	Poecilia_latipinna
ENSODEG00000016254	-	72	61.333	ENSPMEG00000008651	rbm5	98	62.167	Poecilia_mexicana
ENSODEG00000016254	-	100	61.751	ENSPMEG00000004295	rbm5	100	62.384	Poecilia_mexicana
ENSODEG00000016254	-	100	60.550	ENSPREG00000003795	rbm5	100	61.085	Poecilia_reticulata
ENSODEG00000016254	-	72	87.500	ENSPCAG00000005459	RBM5	86	87.500	Procavia_capensis
ENSODEG00000016254	-	100	98.650	ENSPCOG00000025840	RBM5	100	98.650	Propithecus_coquereli
ENSODEG00000016254	-	100	95.828	ENSPVAG00000006812	RBM5	100	95.828	Pteropus_vampyrus
ENSODEG00000016254	-	100	61.003	ENSPNYG00000014787	rbm5	100	61.182	Pundamilia_nyererei
ENSODEG00000016254	-	83	58.848	ENSPNYG00000006361	RBM5	99	57.806	Pundamilia_nyererei
ENSODEG00000016254	-	100	63.551	ENSPNAG00000012070	rbm5	100	63.294	Pygocentrus_nattereri
ENSODEG00000016254	-	100	97.791	ENSRNOG00000018153	Rbm5	100	97.791	Rattus_norvegicus
ENSODEG00000016254	-	100	98.650	ENSRBIG00000012679	RBM5	100	98.650	Rhinopithecus_bieti
ENSODEG00000016254	-	100	98.650	ENSRROG00000041331	RBM5	100	98.650	Rhinopithecus_roxellana
ENSODEG00000016254	-	100	98.896	ENSSBOG00000006324	RBM5	100	98.896	Saimiri_boliviensis_boliviensis
ENSODEG00000016254	-	100	94.479	ENSSHAG00000018260	RBM5	100	94.479	Sarcophilus_harrisii
ENSODEG00000016254	-	100	64.385	ENSSFOG00015019645	-	100	65.574	Scleropages_formosus
ENSODEG00000016254	-	100	64.644	ENSSFOG00015019052	rbm5	94	63.658	Scleropages_formosus
ENSODEG00000016254	-	100	62.009	ENSSMAG00000017106	rbm5	100	61.021	Scophthalmus_maximus
ENSODEG00000016254	-	100	62.890	ENSSDUG00000019775	rbm5	100	62.631	Seriola_dumerili
ENSODEG00000016254	-	100	62.428	ENSSLDG00000002329	rbm5	100	62.121	Seriola_lalandi_dorsalis
ENSODEG00000016254	-	100	60.560	ENSSLDG00000015996	-	100	58.314	Seriola_lalandi_dorsalis
ENSODEG00000016254	-	63	100.000	ENSSARG00000009724	-	67	100.000	Sorex_araneus
ENSODEG00000016254	-	100	77.390	ENSSPUG00000001876	RBM5	85	85.469	Sphenodon_punctatus
ENSODEG00000016254	-	100	61.203	ENSSPAG00000020011	-	100	60.567	Stegastes_partitus
ENSODEG00000016254	-	100	61.208	ENSSPAG00000019638	rbm5	100	61.827	Stegastes_partitus
ENSODEG00000016254	-	100	98.650	ENSSSCG00000011395	RBM5	100	98.650	Sus_scrofa
ENSODEG00000016254	-	93	79.551	ENSTGUG00000006417	RBM5	98	80.237	Taeniopygia_guttata
ENSODEG00000016254	-	94	69.429	ENSTRUG00000008292	rbm5	98	67.429	Takifugu_rubripes
ENSODEG00000016254	-	99	46.644	ENSTNIG00000014742	rbm5	77	64.338	Tetraodon_nigroviridis
ENSODEG00000016254	-	100	90.552	ENSTBEG00000005424	RBM5	100	90.552	Tupaia_belangeri
ENSODEG00000016254	-	100	90.429	ENSTTRG00000007717	RBM5	100	91.779	Tursiops_truncatus
ENSODEG00000016254	-	100	98.896	ENSUAMG00000028347	RBM5	100	98.896	Ursus_americanus
ENSODEG00000016254	-	100	98.896	ENSUMAG00000022027	RBM5	100	98.896	Ursus_maritimus
ENSODEG00000016254	-	90	97.954	ENSVPAG00000009388	RBM5	100	97.954	Vicugna_pacos
ENSODEG00000016254	-	100	99.018	ENSVVUG00000028647	RBM5	100	99.018	Vulpes_vulpes
ENSODEG00000016254	-	100	60.550	ENSXMAG00000016369	rbm5	100	61.085	Xiphophorus_maculatus