EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000016282 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 16860 bases
Position: chrJH651638.1:5363771-5380630
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022180	zf-C2H2	PF00096.26	3.1e-12	1	2
ENSODEP00000022180	zf-C2H2	PF00096.26	3.1e-12	2	2
ENSODEP00000022180	zf-met	PF12874.7	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022441	PRDM12-201	1602	-	ENSODEP00000022180	533 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016282	PRDM12	64	97.376	ENSG00000130711	PRDM12	93	97.376	Homo_sapiens
ENSODEG00000016282	PRDM12	62	78.917	ENSAPOG00000016051	prdm12b	94	77.778	Acanthochromis_polyacanthus
ENSODEG00000016282	PRDM12	65	64.286	ENSAPOG00000018234	-	100	64.286	Acanthochromis_polyacanthus
ENSODEG00000016282	PRDM12	61	94.118	ENSAMEG00000016234	PRDM12	99	94.118	Ailuropoda_melanoleuca
ENSODEG00000016282	PRDM12	64	77.322	ENSACIG00000005193	-	97	77.049	Amphilophus_citrinellus
ENSODEG00000016282	PRDM12	62	79.942	ENSACIG00000019578	prdm12b	94	78.310	Amphilophus_citrinellus
ENSODEG00000016282	PRDM12	62	80.403	ENSAOCG00000015040	prdm12b	94	79.213	Amphiprion_ocellaris
ENSODEG00000016282	PRDM12	61	79.167	ENSAPEG00000022849	-	88	78.592	Amphiprion_percula
ENSODEG00000016282	PRDM12	62	81.105	ENSAPEG00000015092	prdm12b	94	79.887	Amphiprion_percula
ENSODEG00000016282	PRDM12	63	80.409	ENSATEG00000014595	-	99	80.409	Anabas_testudineus
ENSODEG00000016282	PRDM12	64	97.941	ENSANAG00000020616	PRDM12	100	97.941	Aotus_nancymaae
ENSODEG00000016282	PRDM12	64	80.994	ENSACLG00000011876	prdm12b	94	80.994	Astatotilapia_calliptera
ENSODEG00000016282	PRDM12	61	81.871	ENSACLG00000007631	-	87	81.871	Astatotilapia_calliptera
ENSODEG00000016282	PRDM12	63	82.196	ENSAMXG00000008540	PRDM12	93	82.196	Astyanax_mexicanus
ENSODEG00000016282	PRDM12	62	88.323	ENSAMXG00000033665	prdm12b	94	86.246	Astyanax_mexicanus
ENSODEG00000016282	PRDM12	64	97.959	ENSBTAG00000023797	PRDM12	95	97.959	Bos_taurus
ENSODEG00000016282	PRDM12	64	97.668	ENSCJAG00000020540	PRDM12	95	97.668	Callithrix_jacchus
ENSODEG00000016282	PRDM12	56	97.000	ENSCAFG00000023076	PRDM12	93	97.000	Canis_familiaris
ENSODEG00000016282	PRDM12	64	98.251	ENSCAFG00020024046	PRDM12	94	98.251	Canis_lupus_dingo
ENSODEG00000016282	PRDM12	64	98.251	ENSCHIG00000025005	PRDM12	95	98.251	Capra_hircus
ENSODEG00000016282	PRDM12	59	99.361	ENSCPOG00000005901	PRDM12	95	99.361	Cavia_porcellus
ENSODEG00000016282	PRDM12	64	97.668	ENSCCAG00000037485	PRDM12	94	97.668	Cebus_capucinus
ENSODEG00000016282	PRDM12	64	97.668	ENSCATG00000020327	PRDM12	94	97.668	Cercocebus_atys
ENSODEG00000016282	PRDM12	63	99.102	ENSCLAG00000005499	PRDM12	92	99.102	Chinchilla_lanigera
ENSODEG00000016282	PRDM12	64	97.668	ENSCSAG00000014756	PRDM12	94	97.668	Chlorocebus_sabaeus
ENSODEG00000016282	PRDM12	64	92.669	ENSCPBG00000022628	PRDM12	96	92.669	Chrysemys_picta_bellii
ENSODEG00000016282	PRDM12	64	98.542	ENSCGRG00001015005	Prdm12	94	98.542	Cricetulus_griseus_chok1gshd
ENSODEG00000016282	PRDM12	62	81.953	ENSCVAG00000017166	prdm12b	91	81.953	Cyprinodon_variegatus
ENSODEG00000016282	PRDM12	62	77.778	ENSCVAG00000000944	-	90	77.493	Cyprinodon_variegatus
ENSODEG00000016282	PRDM12	65	83.240	ENSDARG00000007430	prdm12b	98	83.240	Danio_rerio
ENSODEG00000016282	PRDM12	64	97.368	ENSDNOG00000042302	PRDM12	94	97.368	Dasypus_novemcinctus
ENSODEG00000016282	PRDM12	61	62.678	ENSEBUG00000016780	prdm12b	74	65.476	Eptatretus_burgeri
ENSODEG00000016282	PRDM12	64	98.251	ENSEASG00005008472	PRDM12	95	98.251	Equus_asinus_asinus
ENSODEG00000016282	PRDM12	64	97.959	ENSECAG00000005933	PRDM12	95	97.959	Equus_caballus
ENSODEG00000016282	PRDM12	61	84.259	ENSELUG00000013674	PRDM12	89	84.259	Esox_lucius
ENSODEG00000016282	PRDM12	63	83.476	ENSELUG00000009905	prdm12b	95	83.476	Esox_lucius
ENSODEG00000016282	PRDM12	64	98.251	ENSFCAG00000043086	PRDM12	94	98.251	Felis_catus
ENSODEG00000016282	PRDM12	64	92.669	ENSFALG00000001445	PRDM12	86	92.669	Ficedula_albicollis
ENSODEG00000016282	PRDM12	62	79.251	ENSFHEG00000007746	-	90	79.539	Fundulus_heteroclitus
ENSODEG00000016282	PRDM12	61	81.711	ENSFHEG00000003944	prdm12b	90	82.493	Fundulus_heteroclitus
ENSODEG00000016282	PRDM12	61	83.283	ENSGMOG00000011797	prdm12b	97	80.758	Gadus_morhua
ENSODEG00000016282	PRDM12	64	92.669	ENSGALG00000003895	PRDM12	96	92.669	Gallus_gallus
ENSODEG00000016282	PRDM12	62	82.738	ENSGAFG00000010827	prdm12b	93	81.429	Gambusia_affinis
ENSODEG00000016282	PRDM12	65	79.339	ENSGACG00000016713	prdm12b	98	79.339	Gasterosteus_aculeatus
ENSODEG00000016282	PRDM12	64	92.962	ENSGAGG00000014083	PRDM12	96	92.962	Gopherus_agassizii
ENSODEG00000016282	PRDM12	64	97.085	ENSGGOG00000010568	PRDM12	94	97.085	Gorilla_gorilla
ENSODEG00000016282	PRDM12	61	81.871	ENSHBUG00000022537	-	80	81.871	Haplochromis_burtoni
ENSODEG00000016282	PRDM12	64	79.320	ENSHBUG00000022878	prdm12b	94	79.320	Haplochromis_burtoni
ENSODEG00000016282	PRDM12	64	98.542	ENSHGLG00000013939	PRDM12	94	98.542	Heterocephalus_glaber_female
ENSODEG00000016282	PRDM12	61	80.702	ENSHCOG00000003663	prdm12b	93	78.237	Hippocampus_comes
ENSODEG00000016282	PRDM12	63	76.540	ENSHCOG00000021167	-	95	76.540	Hippocampus_comes
ENSODEG00000016282	PRDM12	64	79.300	ENSIPUG00000019544	PRDM12	94	79.300	Ictalurus_punctatus
ENSODEG00000016282	PRDM12	62	86.826	ENSIPUG00000017053	prdm12b	94	85.014	Ictalurus_punctatus
ENSODEG00000016282	PRDM12	63	99.112	ENSSTOG00000005986	PRDM12	88	99.112	Ictidomys_tridecemlineatus
ENSODEG00000016282	PRDM12	62	99.697	ENSJJAG00000005424	Prdm12	100	99.697	Jaculus_jaculus
ENSODEG00000016282	PRDM12	60	81.957	ENSKMAG00000021205	-	87	84.839	Kryptolebias_marmoratus
ENSODEG00000016282	PRDM12	61	78.212	ENSKMAG00000016921	prdm12b	92	75.668	Kryptolebias_marmoratus
ENSODEG00000016282	PRDM12	61	83.533	ENSLBEG00000017769	prdm12b	92	80.802	Labrus_bergylta
ENSODEG00000016282	PRDM12	61	80.712	ENSLBEG00000007776	-	89	81.009	Labrus_bergylta
ENSODEG00000016282	PRDM12	64	89.706	ENSLACG00000017560	PRDM12	96	89.706	Latimeria_chalumnae
ENSODEG00000016282	PRDM12	62	86.136	ENSLOCG00000005429	prdm12b	97	84.463	Lepisosteus_oculatus
ENSODEG00000016282	PRDM12	63	96.765	ENSLAFG00000006979	PRDM12	94	96.562	Loxodonta_africana
ENSODEG00000016282	PRDM12	64	97.668	ENSMFAG00000040322	PRDM12	93	97.668	Macaca_fascicularis
ENSODEG00000016282	PRDM12	64	97.668	ENSMNEG00000037234	PRDM12	94	97.668	Macaca_nemestrina
ENSODEG00000016282	PRDM12	61	80.952	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSODEG00000016282	PRDM12	62	82.111	ENSMAMG00000013212	prdm12b	98	78.415	Mastacembelus_armatus
ENSODEG00000016282	PRDM12	61	81.871	ENSMZEG00005000415	PRDM12	86	81.871	Maylandia_zebra
ENSODEG00000016282	PRDM12	64	92.669	ENSMGAG00000005438	PRDM12	96	92.669	Meleagris_gallopavo
ENSODEG00000016282	PRDM12	64	98.534	ENSMAUG00000013040	Prdm12	93	98.534	Mesocricetus_auratus
ENSODEG00000016282	PRDM12	64	97.959	ENSMICG00000015480	PRDM12	95	97.959	Microcebus_murinus
ENSODEG00000016282	PRDM12	64	98.525	ENSMOCG00000021026	Prdm12	93	98.246	Microtus_ochrogaster
ENSODEG00000016282	PRDM12	64	94.721	ENSMODG00000012108	PRDM12	96	94.721	Monodelphis_domestica
ENSODEG00000016282	PRDM12	64	68.966	ENSMALG00000021901	prdm12b	93	68.966	Monopterus_albus
ENSODEG00000016282	PRDM12	64	98.251	MGP_CAROLIEiJ_G0023414	Prdm12	94	98.251	Mus_caroli
ENSODEG00000016282	PRDM12	64	98.251	ENSMUSG00000079466	Prdm12	94	98.251	Mus_musculus
ENSODEG00000016282	PRDM12	64	98.251	MGP_PahariEiJ_G0024871	Prdm12	94	98.251	Mus_pahari
ENSODEG00000016282	PRDM12	64	98.251	MGP_SPRETEiJ_G0024331	Prdm12	94	98.251	Mus_spretus
ENSODEG00000016282	PRDM12	64	96.765	ENSNGAG00000018480	Prdm12	95	96.765	Nannospalax_galili
ENSODEG00000016282	PRDM12	64	75.429	ENSNBRG00000024312	-	97	75.714	Neolamprologus_brichardi
ENSODEG00000016282	PRDM12	62	80.290	ENSNBRG00000006727	prdm12b	94	78.652	Neolamprologus_brichardi
ENSODEG00000016282	PRDM12	64	84.164	ENSMEUG00000003828	PRDM12	96	84.164	Notamacropus_eugenii
ENSODEG00000016282	PRDM12	62	97.576	ENSOPRG00000008680	PRDM12	100	97.576	Ochotona_princeps
ENSODEG00000016282	PRDM12	59	92.332	ENSOCUG00000008241	PRDM12	100	92.332	Oryctolagus_cuniculus
ENSODEG00000016282	PRDM12	64	78.992	ENSORLG00000007114	prdm12b	94	78.992	Oryzias_latipes
ENSODEG00000016282	PRDM12	61	79.472	ENSORLG00000017558	-	87	79.765	Oryzias_latipes
ENSODEG00000016282	PRDM12	61	79.532	ENSORLG00020013167	-	87	79.532	Oryzias_latipes_hni
ENSODEG00000016282	PRDM12	61	81.105	ENSORLG00020019565	prdm12b	94	78.711	Oryzias_latipes_hni
ENSODEG00000016282	PRDM12	61	79.472	ENSORLG00015003435	-	87	79.765	Oryzias_latipes_hsok
ENSODEG00000016282	PRDM12	61	80.814	ENSORLG00015007621	prdm12b	94	78.431	Oryzias_latipes_hsok
ENSODEG00000016282	PRDM12	64	76.519	ENSOMEG00000007762	-	97	76.519	Oryzias_melastigma
ENSODEG00000016282	PRDM12	63	79.155	ENSOMEG00000004134	prdm12b	94	78.611	Oryzias_melastigma
ENSODEG00000016282	PRDM12	62	98.498	ENSOGAG00000007557	PRDM12	100	98.498	Otolemur_garnettii
ENSODEG00000016282	PRDM12	54	97.213	ENSPPAG00000031506	-	97	97.213	Pan_paniscus
ENSODEG00000016282	PRDM12	64	90.116	ENSPPRG00000023024	PRDM12	88	90.116	Panthera_pardus
ENSODEG00000016282	PRDM12	64	97.376	ENSPTRG00000043324	-	94	97.376	Pan_troglodytes
ENSODEG00000016282	PRDM12	64	97.376	ENSPTRG00000021475	PRDM12	94	97.376	Pan_troglodytes
ENSODEG00000016282	PRDM12	64	97.668	ENSPANG00000025967	PRDM12	94	97.668	Papio_anubis
ENSODEG00000016282	PRDM12	64	78.348	ENSPKIG00000004305	PRDM12	99	78.348	Paramormyrops_kingsleyae
ENSODEG00000016282	PRDM12	62	85.057	ENSPKIG00000007228	prdm12b	97	83.889	Paramormyrops_kingsleyae
ENSODEG00000016282	PRDM12	64	92.669	ENSPSIG00000006739	PRDM12	96	92.669	Pelodiscus_sinensis
ENSODEG00000016282	PRDM12	62	80.952	ENSPMGG00000002356	-	87	80.952	Periophthalmus_magnuspinnatus
ENSODEG00000016282	PRDM12	62	82.840	ENSPMGG00000008867	prdm12b	94	81.089	Periophthalmus_magnuspinnatus
ENSODEG00000016282	PRDM12	62	99.094	ENSPEMG00000009969	Prdm12	96	94.886	Peromyscus_maniculatus_bairdii
ENSODEG00000016282	PRDM12	64	95.015	ENSPCIG00000024119	PRDM12	96	95.015	Phascolarctos_cinereus
ENSODEG00000016282	PRDM12	63	81.143	ENSPFOG00000019841	prdm12b	94	81.143	Poecilia_formosa
ENSODEG00000016282	PRDM12	62	83.036	ENSPLAG00000016626	prdm12b	93	81.429	Poecilia_latipinna
ENSODEG00000016282	PRDM12	60	82.515	ENSPMEG00000016698	prdm12b	92	80.882	Poecilia_mexicana
ENSODEG00000016282	PRDM12	62	75.811	ENSPREG00000003211	-	93	75.811	Poecilia_reticulata
ENSODEG00000016282	PRDM12	62	82.891	ENSPREG00000015073	prdm12b	92	81.429	Poecilia_reticulata
ENSODEG00000016282	PRDM12	64	96.491	ENSPPYG00000019694	PRDM12	97	96.491	Pongo_abelii
ENSODEG00000016282	PRDM12	64	98.251	ENSPCOG00000022255	PRDM12	94	98.251	Propithecus_coquereli
ENSODEG00000016282	PRDM12	64	97.953	ENSPVAG00000001511	PRDM12	93	97.953	Pteropus_vampyrus
ENSODEG00000016282	PRDM12	64	78.592	ENSPNYG00000009607	prdm12b	94	78.592	Pundamilia_nyererei
ENSODEG00000016282	PRDM12	61	81.871	ENSPNYG00000013589	-	86	81.871	Pundamilia_nyererei
ENSODEG00000016282	PRDM12	62	88.623	ENSPNAG00000024532	prdm12b	94	86.744	Pygocentrus_nattereri
ENSODEG00000016282	PRDM12	61	80.851	ENSPNAG00000013396	PRDM12	92	78.488	Pygocentrus_nattereri
ENSODEG00000016282	PRDM12	64	98.251	ENSRNOG00000009218	Prdm12	94	98.251	Rattus_norvegicus
ENSODEG00000016282	PRDM12	59	98.107	ENSRBIG00000042712	PRDM12	96	91.691	Rhinopithecus_bieti
ENSODEG00000016282	PRDM12	60	98.131	ENSRROG00000043554	PRDM12	100	98.131	Rhinopithecus_roxellana
ENSODEG00000016282	PRDM12	64	94.152	ENSSHAG00000015972	PRDM12	96	94.152	Sarcophilus_harrisii
ENSODEG00000016282	PRDM12	62	79.487	ENSSMAG00000003754	prdm12b	90	79.772	Scophthalmus_maximus
ENSODEG00000016282	PRDM12	64	81.686	ENSSDUG00000019071	-	95	81.977	Seriola_dumerili
ENSODEG00000016282	PRDM12	65	77.333	ENSSDUG00000023498	prdm12b	98	77.333	Seriola_dumerili
ENSODEG00000016282	PRDM12	61	84.356	ENSSLDG00000013562	-	93	84.663	Seriola_lalandi_dorsalis
ENSODEG00000016282	PRDM12	65	77.688	ENSSLDG00000009557	prdm12b	98	77.688	Seriola_lalandi_dorsalis
ENSODEG00000016282	PRDM12	64	92.375	ENSSPUG00000013424	PRDM12	96	92.375	Sphenodon_punctatus
ENSODEG00000016282	PRDM12	61	71.976	ENSSPAG00000022420	-	88	73.860	Stegastes_partitus
ENSODEG00000016282	PRDM12	61	81.579	ENSSPAG00000018824	prdm12b	94	79.272	Stegastes_partitus
ENSODEG00000016282	PRDM12	64	98.251	ENSSSCG00000005703	PRDM12	94	98.251	Sus_scrofa
ENSODEG00000016282	PRDM12	63	76.901	ENSTRUG00000013239	-	99	76.901	Takifugu_rubripes
ENSODEG00000016282	PRDM12	62	82.544	ENSTRUG00000018659	prdm12b	98	79.501	Takifugu_rubripes
ENSODEG00000016282	PRDM12	64	77.457	ENSTNIG00000005859	-	96	77.457	Tetraodon_nigroviridis
ENSODEG00000016282	PRDM12	62	83.186	ENSTNIG00000009020	prdm12b	97	80.110	Tetraodon_nigroviridis
ENSODEG00000016282	PRDM12	64	97.376	ENSUAMG00000009653	PRDM12	95	97.376	Ursus_americanus
ENSODEG00000016282	PRDM12	62	98.792	ENSVVUG00000027662	PRDM12	79	98.792	Vulpes_vulpes
ENSODEG00000016282	PRDM12	62	82.738	ENSXCOG00000002836	prdm12b	94	81.143	Xiphophorus_couchianus
ENSODEG00000016282	PRDM12	62	82.249	ENSXMAG00000005537	prdm12b	94	80.682	Xiphophorus_maculatus
ENSODEG00000016282	PRDM12	62	79.592	ENSXMAG00000028012	-	89	79.592	Xiphophorus_maculatus