EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000016337 (Gene tree)
Gene ID: 101592101
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 100019 bases
Position: chrJH651526.1:25362089-25462107
Accession: 101592101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022255	Not1	PF04054.15	9.1e-153	1	1
ENSODEP00000022256	Not1	PF04054.15	1.3e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022516	CNOT1-201	7734	XM_004625921	ENSODEP00000022255	2376 (aa)	XP_004625978	UPI00033381CC
ENSODET00000022517	CNOT1-202	6981	XM_004625925	ENSODEP00000022256	2326 (aa)	XP_004625982	UPI000333747B

Gene Model

Click here to download ENSODEG00000016337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016337	CNOT1	100	99.537	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSODEG00000016337	CNOT1	97	97.055	ENSAPOG00000005042	cnot1	100	97.055	Acanthochromis_polyacanthus
ENSODEG00000016337	CNOT1	100	99.369	ENSAMEG00000017298	CNOT1	100	99.369	Ailuropoda_melanoleuca
ENSODEG00000016337	CNOT1	90	89.842	ENSACIG00000016003	cnot1	100	90.168	Amphilophus_citrinellus
ENSODEG00000016337	CNOT1	100	90.470	ENSAPEG00000022342	cnot1	100	90.428	Amphiprion_percula
ENSODEG00000016337	CNOT1	97	97.195	ENSATEG00000012892	cnot1	100	97.195	Anabas_testudineus
ENSODEG00000016337	CNOT1	100	97.563	ENSAPLG00000007162	CNOT1	100	97.563	Anas_platyrhynchos
ENSODEG00000016337	CNOT1	92	95.779	ENSACAG00000001602	CNOT1	98	96.011	Anolis_carolinensis
ENSODEG00000016337	CNOT1	100	98.151	ENSANAG00000038198	CNOT1	100	98.151	Aotus_nancymaae
ENSODEG00000016337	CNOT1	97	97.195	ENSACLG00000014234	cnot1	100	97.195	Astatotilapia_calliptera
ENSODEG00000016337	CNOT1	100	90.913	ENSAMXG00000013170	cnot1	100	91.421	Astyanax_mexicanus
ENSODEG00000016337	CNOT1	100	99.705	ENSBTAG00000020782	CNOT1	100	99.705	Bos_taurus
ENSODEG00000016337	CNOT1	81	40.440	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSODEG00000016337	CNOT1	100	99.495	ENSCJAG00000011318	CNOT1	100	99.495	Callithrix_jacchus
ENSODEG00000016337	CNOT1	100	99.286	ENSCAFG00000008426	CNOT1	100	99.286	Canis_familiaris
ENSODEG00000016337	CNOT1	100	99.570	ENSCAFG00020010156	CNOT1	100	99.570	Canis_lupus_dingo
ENSODEG00000016337	CNOT1	100	99.705	ENSCHIG00000010452	CNOT1	100	99.705	Capra_hircus
ENSODEG00000016337	CNOT1	100	99.663	ENSTSYG00000006888	CNOT1	100	99.663	Carlito_syrichta
ENSODEG00000016337	CNOT1	100	95.160	ENSCPOG00000013026	CNOT1	100	95.160	Cavia_porcellus
ENSODEG00000016337	CNOT1	100	97.938	ENSCCAG00000026333	CNOT1	100	97.938	Cebus_capucinus
ENSODEG00000016337	CNOT1	100	99.579	ENSCATG00000032625	CNOT1	100	99.579	Cercocebus_atys
ENSODEG00000016337	CNOT1	100	99.874	ENSCLAG00000006289	CNOT1	100	99.874	Chinchilla_lanigera
ENSODEG00000016337	CNOT1	100	99.579	ENSCSAG00000004731	CNOT1	100	99.579	Chlorocebus_sabaeus
ENSODEG00000016337	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSODEG00000016337	CNOT1	98	95.793	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSODEG00000016337	CNOT1	100	59.119	ENSCING00000009149	-	100	58.946	Ciona_intestinalis
ENSODEG00000016337	CNOT1	89	63.020	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSODEG00000016337	CNOT1	100	97.688	ENSCANG00000040534	CNOT1	100	97.688	Colobus_angolensis_palliatus
ENSODEG00000016337	CNOT1	100	99.369	ENSCGRG00001016365	Cnot1	100	99.369	Cricetulus_griseus_chok1gshd
ENSODEG00000016337	CNOT1	100	99.369	ENSCGRG00000001714	Cnot1	100	99.369	Cricetulus_griseus_crigri
ENSODEG00000016337	CNOT1	97	96.494	ENSCVAG00000018930	cnot1	100	96.494	Cyprinodon_variegatus
ENSODEG00000016337	CNOT1	100	89.824	ENSDARG00000004174	cnot1	100	89.774	Danio_rerio
ENSODEG00000016337	CNOT1	100	97.055	ENSDNOG00000013250	CNOT1	100	97.055	Dasypus_novemcinctus
ENSODEG00000016337	CNOT1	99	46.309	FBgn0085436	Not1	99	48.475	Drosophila_melanogaster
ENSODEG00000016337	CNOT1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
ENSODEG00000016337	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSODEG00000016337	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSODEG00000016337	CNOT1	100	99.663	ENSECAG00000009889	CNOT1	100	99.663	Equus_caballus
ENSODEG00000016337	CNOT1	90	99.216	ENSEEUG00000006015	CNOT1	90	99.216	Erinaceus_europaeus
ENSODEG00000016337	CNOT1	100	89.776	ENSELUG00000014085	cnot1	100	89.458	Esox_lucius
ENSODEG00000016337	CNOT1	100	99.371	ENSFCAG00000025155	CNOT1	100	99.371	Felis_catus
ENSODEG00000016337	CNOT1	100	97.643	ENSFALG00000007285	CNOT1	100	97.643	Ficedula_albicollis
ENSODEG00000016337	CNOT1	100	99.874	ENSFDAG00000013399	CNOT1	100	99.874	Fukomys_damarensis
ENSODEG00000016337	CNOT1	100	90.256	ENSFHEG00000020574	cnot1	100	90.256	Fundulus_heteroclitus
ENSODEG00000016337	CNOT1	92	89.564	ENSGMOG00000012864	cnot1	100	89.935	Gadus_morhua
ENSODEG00000016337	CNOT1	100	97.643	ENSGALG00000002301	CNOT1	100	97.643	Gallus_gallus
ENSODEG00000016337	CNOT1	100	89.169	ENSGAFG00000015005	cnot1	100	89.127	Gambusia_affinis
ENSODEG00000016337	CNOT1	92	90.403	ENSGACG00000002606	cnot1	100	95.874	Gasterosteus_aculeatus
ENSODEG00000016337	CNOT1	100	97.770	ENSGAGG00000022646	CNOT1	100	97.770	Gopherus_agassizii
ENSODEG00000016337	CNOT1	100	99.495	ENSGGOG00000009547	CNOT1	100	99.495	Gorilla_gorilla
ENSODEG00000016337	CNOT1	97	97.195	ENSHBUG00000001729	cnot1	100	97.195	Haplochromis_burtoni
ENSODEG00000016337	CNOT1	100	99.705	ENSHGLG00000014322	CNOT1	100	99.705	Heterocephalus_glaber_female
ENSODEG00000016337	CNOT1	100	89.381	ENSHCOG00000006501	cnot1	100	89.478	Hippocampus_comes
ENSODEG00000016337	CNOT1	100	88.800	ENSIPUG00000011915	cnot1	100	89.262	Ictalurus_punctatus
ENSODEG00000016337	CNOT1	100	99.705	ENSSTOG00000005490	CNOT1	100	99.705	Ictidomys_tridecemlineatus
ENSODEG00000016337	CNOT1	100	99.140	ENSJJAG00000000633	Cnot1	100	99.140	Jaculus_jaculus
ENSODEG00000016337	CNOT1	100	90.171	ENSKMAG00000006149	cnot1	100	90.050	Kryptolebias_marmoratus
ENSODEG00000016337	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSODEG00000016337	CNOT1	100	95.118	ENSLACG00000010869	CNOT1	100	95.118	Latimeria_chalumnae
ENSODEG00000016337	CNOT1	100	92.953	ENSLOCG00000006324	cnot1	100	92.953	Lepisosteus_oculatus
ENSODEG00000016337	CNOT1	100	99.411	ENSLAFG00000000098	CNOT1	100	99.411	Loxodonta_africana
ENSODEG00000016337	CNOT1	100	99.570	ENSMFAG00000035888	CNOT1	100	99.570	Macaca_fascicularis
ENSODEG00000016337	CNOT1	100	99.537	ENSMMUG00000014625	CNOT1	100	99.537	Macaca_mulatta
ENSODEG00000016337	CNOT1	100	96.991	ENSMNEG00000031820	CNOT1	100	99.580	Macaca_nemestrina
ENSODEG00000016337	CNOT1	100	98.366	ENSMLEG00000040933	CNOT1	100	98.366	Mandrillus_leucophaeus
ENSODEG00000016337	CNOT1	100	89.173	ENSMAMG00000016524	cnot1	100	89.253	Mastacembelus_armatus
ENSODEG00000016337	CNOT1	97	97.195	ENSMZEG00005016210	cnot1	100	97.195	Maylandia_zebra
ENSODEG00000016337	CNOT1	100	97.391	ENSMGAG00000001908	CNOT1	100	97.391	Meleagris_gallopavo
ENSODEG00000016337	CNOT1	100	99.453	ENSMICG00000007071	CNOT1	100	99.453	Microcebus_murinus
ENSODEG00000016337	CNOT1	100	99.411	ENSMOCG00000017969	Cnot1	100	99.411	Microtus_ochrogaster
ENSODEG00000016337	CNOT1	97	93.829	ENSMMOG00000019134	cnot1	100	93.829	Mola_mola
ENSODEG00000016337	CNOT1	100	97.854	ENSMODG00000014199	CNOT1	100	97.854	Monodelphis_domestica
ENSODEG00000016337	CNOT1	100	90.172	ENSMALG00000008645	cnot1	100	90.214	Monopterus_albus
ENSODEG00000016337	CNOT1	95	99.777	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	Mus_caroli
ENSODEG00000016337	CNOT1	100	99.453	ENSMUSG00000036550	Cnot1	100	99.453	Mus_musculus
ENSODEG00000016337	CNOT1	100	99.495	MGP_PahariEiJ_G0023028	Cnot1	100	99.495	Mus_pahari
ENSODEG00000016337	CNOT1	100	99.453	MGP_SPRETEiJ_G0032549	Cnot1	100	99.453	Mus_spretus
ENSODEG00000016337	CNOT1	100	99.663	ENSMPUG00000004830	CNOT1	100	99.663	Mustela_putorius_furo
ENSODEG00000016337	CNOT1	100	98.990	ENSMLUG00000003728	CNOT1	100	98.990	Myotis_lucifugus
ENSODEG00000016337	CNOT1	100	99.663	ENSNGAG00000018628	Cnot1	100	99.663	Nannospalax_galili
ENSODEG00000016337	CNOT1	94	97.195	ENSNBRG00000019358	cnot1	100	97.195	Neolamprologus_brichardi
ENSODEG00000016337	CNOT1	100	99.484	ENSNLEG00000003566	CNOT1	100	99.484	Nomascus_leucogenys
ENSODEG00000016337	CNOT1	86	98.210	ENSMEUG00000006145	CNOT1	87	98.210	Notamacropus_eugenii
ENSODEG00000016337	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSODEG00000016337	CNOT1	100	90.536	ENSONIG00000007358	cnot1	100	90.130	Oreochromis_niloticus
ENSODEG00000016337	CNOT1	92	98.089	ENSOANG00000012109	CNOT1	100	98.119	Ornithorhynchus_anatinus
ENSODEG00000016337	CNOT1	100	99.579	ENSOCUG00000006911	CNOT1	100	99.579	Oryctolagus_cuniculus
ENSODEG00000016337	CNOT1	100	90.273	ENSORLG00000013734	cnot1	100	90.310	Oryzias_latipes
ENSODEG00000016337	CNOT1	100	90.734	ENSORLG00020017012	cnot1	100	90.403	Oryzias_latipes_hni
ENSODEG00000016337	CNOT1	100	90.648	ENSORLG00015007091	cnot1	100	90.146	Oryzias_latipes_hsok
ENSODEG00000016337	CNOT1	100	90.013	ENSOMEG00000015124	cnot1	100	90.266	Oryzias_melastigma
ENSODEG00000016337	CNOT1	100	99.495	ENSOGAG00000000543	CNOT1	100	99.495	Otolemur_garnettii
ENSODEG00000016337	CNOT1	100	99.705	ENSOARG00000001567	CNOT1	100	99.705	Ovis_aries
ENSODEG00000016337	CNOT1	100	99.537	ENSPPAG00000022013	CNOT1	100	99.537	Pan_paniscus
ENSODEG00000016337	CNOT1	100	99.663	ENSPPRG00000004867	CNOT1	100	99.663	Panthera_pardus
ENSODEG00000016337	CNOT1	100	99.663	ENSPTIG00000012589	CNOT1	100	99.663	Panthera_tigris_altaica
ENSODEG00000016337	CNOT1	100	99.527	ENSPTRG00000008183	CNOT1	100	99.527	Pan_troglodytes
ENSODEG00000016337	CNOT1	100	96.102	ENSPANG00000020901	CNOT1	100	96.102	Papio_anubis
ENSODEG00000016337	CNOT1	97	93.399	ENSPKIG00000002914	CNOT1	99	93.399	Paramormyrops_kingsleyae
ENSODEG00000016337	CNOT1	100	92.153	ENSPKIG00000023538	CNOT1	100	92.321	Paramormyrops_kingsleyae
ENSODEG00000016337	CNOT1	100	97.643	ENSPSIG00000005499	CNOT1	100	97.643	Pelodiscus_sinensis
ENSODEG00000016337	CNOT1	100	81.124	ENSPMAG00000009381	cnot1	100	81.024	Petromyzon_marinus
ENSODEG00000016337	CNOT1	100	97.766	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSODEG00000016337	CNOT1	99	89.771	ENSPFOG00000003497	cnot1	100	89.810	Poecilia_formosa
ENSODEG00000016337	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSODEG00000016337	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSODEG00000016337	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSODEG00000016337	CNOT1	100	99.495	ENSPPYG00000007410	CNOT1	100	99.495	Pongo_abelii
ENSODEG00000016337	CNOT1	90	97.359	ENSPCAG00000003241	CNOT1	90	97.359	Procavia_capensis
ENSODEG00000016337	CNOT1	100	99.484	ENSPCOG00000027139	CNOT1	100	99.484	Propithecus_coquereli
ENSODEG00000016337	CNOT1	100	97.012	ENSPVAG00000004243	CNOT1	100	97.012	Pteropus_vampyrus
ENSODEG00000016337	CNOT1	97	97.195	ENSPNYG00000012919	cnot1	100	97.195	Pundamilia_nyererei
ENSODEG00000016337	CNOT1	100	89.819	ENSPNAG00000000246	cnot1	100	90.240	Pygocentrus_nattereri
ENSODEG00000016337	CNOT1	100	99.453	ENSRNOG00000012271	Cnot1	100	99.453	Rattus_norvegicus
ENSODEG00000016337	CNOT1	100	97.463	ENSRBIG00000044598	CNOT1	100	97.463	Rhinopithecus_bieti
ENSODEG00000016337	CNOT1	100	99.579	ENSRROG00000000906	CNOT1	100	99.579	Rhinopithecus_roxellana
ENSODEG00000016337	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSODEG00000016337	CNOT1	100	95.283	ENSSBOG00000029155	CNOT1	100	95.283	Saimiri_boliviensis_boliviensis
ENSODEG00000016337	CNOT1	100	97.939	ENSSHAG00000012187	CNOT1	100	97.939	Sarcophilus_harrisii
ENSODEG00000016337	CNOT1	100	92.463	ENSSFOG00015017614	cnot1	100	92.202	Scleropages_formosus
ENSODEG00000016337	CNOT1	97	97.195	ENSSMAG00000013844	cnot1	100	97.195	Scophthalmus_maximus
ENSODEG00000016337	CNOT1	97	97.055	ENSSDUG00000021491	cnot1	100	97.055	Seriola_dumerili
ENSODEG00000016337	CNOT1	97	97.055	ENSSLDG00000014816	cnot1	100	97.055	Seriola_lalandi_dorsalis
ENSODEG00000016337	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSODEG00000016337	CNOT1	100	90.558	ENSSPAG00000018802	cnot1	100	90.348	Stegastes_partitus
ENSODEG00000016337	CNOT1	100	99.495	ENSSSCG00000002799	CNOT1	100	99.495	Sus_scrofa
ENSODEG00000016337	CNOT1	100	97.520	ENSTGUG00000005919	CNOT1	100	97.520	Taeniopygia_guttata
ENSODEG00000016337	CNOT1	100	88.986	ENSTNIG00000018706	cnot1	100	88.750	Tetraodon_nigroviridis
ENSODEG00000016337	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSODEG00000016337	CNOT1	95	99.359	ENSTTRG00000008460	CNOT1	95	99.359	Tursiops_truncatus
ENSODEG00000016337	CNOT1	100	99.663	ENSUAMG00000009251	CNOT1	100	99.663	Ursus_americanus
ENSODEG00000016337	CNOT1	100	99.663	ENSUMAG00000021291	CNOT1	100	99.663	Ursus_maritimus
ENSODEG00000016337	CNOT1	97	97.099	ENSVPAG00000008846	CNOT1	97	97.099	Vicugna_pacos
ENSODEG00000016337	CNOT1	100	98.532	ENSVVUG00000024037	CNOT1	100	99.202	Vulpes_vulpes
ENSODEG00000016337	CNOT1	100	90.386	ENSXETG00000015900	cnot1	100	90.176	Xenopus_tropicalis
ENSODEG00000016337	CNOT1	100	89.337	ENSXCOG00000013552	cnot1	100	89.295	Xiphophorus_couchianus
ENSODEG00000016337	CNOT1	100	89.379	ENSXMAG00000006031	cnot1	100	89.337	Xiphophorus_maculatus