EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSODEG00000016417 (Gene tree)
Gene ID
101562234
Gene Symbol
PTCD2
Alias
-
Full Name
pentatricopeptide repeat domain 2
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
31458 bases
Position
chrJH651516.1:21660783-21692240
Accession
101562234
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000022364MRP-S27PF10037.93.4e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000022625PTCD2-2011152XM_012513528ENSODEP00000022364383 (aa)XP_012368982UPI00062A67ED
Gene Model
Click here to download ENSODEG00000016417's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016417's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000016417PTCD210077.023ENSG00000049883PTCD210077.340Homo_sapiens
ENSODEG00000016417PTCD29346.761ENSAPOG00000020682ptcd29346.761Acanthochromis_polyacanthus
ENSODEG00000016417PTCD29773.784ENSAMEG00000007194PTCD29573.784Ailuropoda_melanoleuca
ENSODEG00000016417PTCD29043.266ENSACIG00000002053ptcd210043.266Amphilophus_citrinellus
ENSODEG00000016417PTCD29346.197ENSAOCG00000006616ptcd29146.197Amphiprion_ocellaris
ENSODEG00000016417PTCD29346.197ENSAPEG00000022926ptcd29146.197Amphiprion_percula
ENSODEG00000016417PTCD29957.480ENSACAG00000009747PTCD29757.480Anolis_carolinensis
ENSODEG00000016417PTCD210078.068ENSANAG00000029353PTCD29978.068Aotus_nancymaae
ENSODEG00000016417PTCD29644.687ENSACLG00000027742ptcd29244.687Astatotilapia_calliptera
ENSODEG00000016417PTCD28942.398ENSAMXG00000029404ptcd29142.398Astyanax_mexicanus
ENSODEG00000016417PTCD210077.083ENSBTAG00000014675PTCD210077.083Bos_taurus
ENSODEG00000016417PTCD210076.501ENSCJAG00000016364PTCD29976.501Callithrix_jacchus
ENSODEG00000016417PTCD210073.107ENSCAFG00000007982PTCD28774.595Canis_familiaris
ENSODEG00000016417PTCD29075.434ENSCAFG00020019147PTCD29775.434Canis_lupus_dingo
ENSODEG00000016417PTCD210078.125ENSCHIG00000017118PTCD210078.125Capra_hircus
ENSODEG00000016417PTCD210081.462ENSCPOG00000040168PTCD210081.462Cavia_porcellus
ENSODEG00000016417PTCD28571.779ENSCCAG00000021996-9872.414Cebus_capucinus
ENSODEG00000016417PTCD210077.285ENSCCAG00000029389-9977.285Cebus_capucinus
ENSODEG00000016417PTCD210076.240ENSCATG00000019069PTCD210076.240Cercocebus_atys
ENSODEG00000016417PTCD210082.768ENSCLAG00000000072PTCD210082.768Chinchilla_lanigera
ENSODEG00000016417PTCD210077.546ENSCSAG00000015623PTCD210077.546Chlorocebus_sabaeus
ENSODEG00000016417PTCD29057.471ENSCHOG00000010634PTCD210057.471Choloepus_hoffmanni
ENSODEG00000016417PTCD29355.866ENSCPBG00000000216PTCD29255.866Chrysemys_picta_bellii
ENSODEG00000016417PTCD210077.546ENSCANG00000035636PTCD29977.546Colobus_angolensis_palliatus
ENSODEG00000016417PTCD29574.586ENSCGRG00001015289Ptcd27974.586Cricetulus_griseus_chok1gshd
ENSODEG00000016417PTCD29574.586ENSCGRG00000006193Ptcd27974.586Cricetulus_griseus_crigri
ENSODEG00000016417PTCD29344.507ENSCVAG00000001285ptcd29144.507Cyprinodon_variegatus
ENSODEG00000016417PTCD29246.610ENSDARG00000035391ptcd29246.610Danio_rerio
ENSODEG00000016417PTCD210072.063ENSDNOG00000008719PTCD210072.063Dasypus_novemcinctus
ENSODEG00000016417PTCD210073.590ENSDORG00000004921Ptcd210073.590Dipodomys_ordii
ENSODEG00000016417PTCD210067.188ENSETEG00000016542PTCD29967.188Echinops_telfairi
ENSODEG00000016417PTCD210075.979ENSEASG00005018038PTCD210075.979Equus_asinus_asinus
ENSODEG00000016417PTCD210076.501ENSECAG00000007022PTCD29876.501Equus_caballus
ENSODEG00000016417PTCD210068.146ENSEEUG00000014031PTCD29968.146Erinaceus_europaeus
ENSODEG00000016417PTCD29250.565ENSELUG00000003584ptcd29250.565Esox_lucius
ENSODEG00000016417PTCD210068.146ENSFCAG00000045432PTCD28268.146Felis_catus
ENSODEG00000016417PTCD28551.070ENSFALG00000010299PTCD29951.070Ficedula_albicollis
ENSODEG00000016417PTCD210079.896ENSFDAG00000018461PTCD210079.896Fukomys_damarensis
ENSODEG00000016417PTCD29152.137ENSGMOG00000003637ptcd29152.137Gadus_morhua
ENSODEG00000016417PTCD29249.435ENSGALG00000038260PTCD210047.781Gallus_gallus
ENSODEG00000016417PTCD29259.887ENSGAGG00000021952PTCD29159.887Gopherus_agassizii
ENSODEG00000016417PTCD210077.023ENSGGOG00000010695PTCD29977.023Gorilla_gorilla
ENSODEG00000016417PTCD29644.687ENSHBUG00000009191ptcd29244.687Haplochromis_burtoni
ENSODEG00000016417PTCD210080.157ENSHGLG00000001234PTCD210080.157Heterocephalus_glaber_female
ENSODEG00000016417PTCD210080.157ENSHGLG00100015419PTCD210080.157Heterocephalus_glaber_male
ENSODEG00000016417PTCD29847.354ENSHCOG00000001703ptcd29647.354Hippocampus_comes
ENSODEG00000016417PTCD28547.095ENSIPUG00000006080ptcd29146.705Ictalurus_punctatus
ENSODEG00000016417PTCD29975.131ENSSTOG00000006596PTCD29975.131Ictidomys_tridecemlineatus
ENSODEG00000016417PTCD210075.457ENSJJAG00000024388Ptcd210075.457Jaculus_jaculus
ENSODEG00000016417PTCD29743.351ENSKMAG00000009329ptcd29843.351Kryptolebias_marmoratus
ENSODEG00000016417PTCD29545.308ENSLBEG00000024871ptcd29545.308Labrus_bergylta
ENSODEG00000016417PTCD29355.000ENSLOCG00000011122ptcd29455.000Lepisosteus_oculatus
ENSODEG00000016417PTCD28175.241ENSLAFG00000004115PTCD210075.241Loxodonta_africana
ENSODEG00000016417PTCD210076.501ENSMFAG00000031516PTCD29976.501Macaca_fascicularis
ENSODEG00000016417PTCD210077.023ENSMNEG00000007537PTCD210077.023Macaca_nemestrina
ENSODEG00000016417PTCD210076.501ENSMLEG00000031093PTCD29976.501Mandrillus_leucophaeus
ENSODEG00000016417PTCD29647.826ENSMAMG00000018529ptcd29447.826Mastacembelus_armatus
ENSODEG00000016417PTCD29644.687ENSMZEG00005003625ptcd29244.687Maylandia_zebra
ENSODEG00000016417PTCD29150.287ENSMGAG00000005033PTCD210050.287Meleagris_gallopavo
ENSODEG00000016417PTCD210074.740ENSMICG00000004535PTCD29974.740Microcebus_murinus
ENSODEG00000016417PTCD210072.846ENSMOCG00000019985Ptcd210072.846Microtus_ochrogaster
ENSODEG00000016417PTCD29359.270ENSMODG00000001695PTCD29359.270Monodelphis_domestica
ENSODEG00000016417PTCD29648.098ENSMALG00000022372ptcd29448.098Monopterus_albus
ENSODEG00000016417PTCD210072.656MGP_CAROLIEiJ_G0018829Ptcd210072.656Mus_caroli
ENSODEG00000016417PTCD210071.875ENSMUSG00000021650Ptcd210071.875Mus_musculus
ENSODEG00000016417PTCD210074.674MGP_PahariEiJ_G0015904Ptcd210074.674Mus_pahari
ENSODEG00000016417PTCD210072.396MGP_SPRETEiJ_G0019711Ptcd210072.396Mus_spretus
ENSODEG00000016417PTCD29775.676ENSMPUG00000014401PTCD29775.676Mustela_putorius_furo
ENSODEG00000016417PTCD210073.890ENSMLUG00000007374PTCD29973.890Myotis_lucifugus
ENSODEG00000016417PTCD210073.890ENSNGAG00000005027Ptcd210073.890Nannospalax_galili
ENSODEG00000016417PTCD28645.455ENSNBRG00000000092-10045.455Neolamprologus_brichardi
ENSODEG00000016417PTCD29644.959ENSNBRG00000008174ptcd29444.959Neolamprologus_brichardi
ENSODEG00000016417PTCD210077.285ENSNLEG00000004516PTCD29977.285Nomascus_leucogenys
ENSODEG00000016417PTCD28250.479ENSMEUG00000014012-8250.479Notamacropus_eugenii
ENSODEG00000016417PTCD210071.540ENSOPRG00000007290PTCD29971.540Ochotona_princeps
ENSODEG00000016417PTCD28045.928ENSONIG00000011269ptcd28845.928Oreochromis_niloticus
ENSODEG00000016417PTCD29377.933ENSOCUG00000007970PTCD210074.935Oryctolagus_cuniculus
ENSODEG00000016417PTCD29346.910ENSORLG00000003851ptcd29146.910Oryzias_latipes
ENSODEG00000016417PTCD29346.067ENSORLG00020009823ptcd29346.067Oryzias_latipes_hni
ENSODEG00000016417PTCD29147.143ENSORLG00015016777ptcd29947.143Oryzias_latipes_hsok
ENSODEG00000016417PTCD29046.243ENSOMEG00000012396ptcd28446.243Oryzias_melastigma
ENSODEG00000016417PTCD210069.974ENSOGAG00000008390PTCD29969.974Otolemur_garnettii
ENSODEG00000016417PTCD210077.604ENSOARG00000005087PTCD29977.604Ovis_aries
ENSODEG00000016417PTCD210077.023ENSPPAG00000028480PTCD29977.023Pan_paniscus
ENSODEG00000016417PTCD210076.762ENSPTRG00000016968PTCD29976.762Pan_troglodytes
ENSODEG00000016417PTCD29078.841ENSPANG00000006611PTCD28978.841Papio_anubis
ENSODEG00000016417PTCD29249.153ENSPKIG00000019896ptcd29249.153Paramormyrops_kingsleyae
ENSODEG00000016417PTCD28358.675ENSPSIG00000014559PTCD29858.675Pelodiscus_sinensis
ENSODEG00000016417PTCD210072.727ENSPEMG00000000884Ptcd210072.727Peromyscus_maniculatus_bairdii
ENSODEG00000016417PTCD29459.444ENSPCIG00000029047PTCD29459.444Phascolarctos_cinereus
ENSODEG00000016417PTCD28944.868ENSPLAG00000010456ptcd29343.869Poecilia_latipinna
ENSODEG00000016417PTCD29344.507ENSPREG00000021797ptcd29044.507Poecilia_reticulata
ENSODEG00000016417PTCD210067.624ENSPPYG00000015543PTCD29967.624Pongo_abelii
ENSODEG00000016417PTCD28165.372ENSPCAG00000006806PTCD29865.372Procavia_capensis
ENSODEG00000016417PTCD210072.063ENSPVAG00000010935PTCD29972.063Pteropus_vampyrus
ENSODEG00000016417PTCD29644.687ENSPNYG00000003122ptcd29244.687Pundamilia_nyererei
ENSODEG00000016417PTCD29149.429ENSPNAG00000021490ptcd29149.714Pygocentrus_nattereri
ENSODEG00000016417PTCD210073.766ENSRNOG00000028403Ptcd210073.766Rattus_norvegicus
ENSODEG00000016417PTCD210073.629ENSRBIG00000032929PTCD29973.629Rhinopithecus_bieti
ENSODEG00000016417PTCD210077.807ENSRROG00000000080PTCD210077.807Rhinopithecus_roxellana
ENSODEG00000016417PTCD210075.718ENSSBOG00000018911PTCD210075.718Saimiri_boliviensis_boliviensis
ENSODEG00000016417PTCD29458.056ENSSHAG00000003833PTCD29358.056Sarcophilus_harrisii
ENSODEG00000016417PTCD29348.596ENSSFOG00015015415ptcd29248.596Scleropages_formosus
ENSODEG00000016417PTCD29145.821ENSSMAG00000010350ptcd29045.821Scophthalmus_maximus
ENSODEG00000016417PTCD29647.283ENSSDUG00000008142ptcd29047.283Seriola_dumerili
ENSODEG00000016417PTCD29647.283ENSSLDG00000015284ptcd29447.283Seriola_lalandi_dorsalis
ENSODEG00000016417PTCD28165.696ENSSARG00000004983PTCD29965.696Sorex_araneus
ENSODEG00000016417PTCD210052.073ENSSPUG00000000176PTCD29652.073Sphenodon_punctatus
ENSODEG00000016417PTCD29346.479ENSSPAG00000008591ptcd29146.479Stegastes_partitus
ENSODEG00000016417PTCD210075.979ENSSSCG00000016975PTCD29075.979Sus_scrofa
ENSODEG00000016417PTCD29050.725ENSTGUG00000005705PTCD29950.725Taeniopygia_guttata
ENSODEG00000016417PTCD210072.585ENSTBEG00000016559PTCD29972.585Tupaia_belangeri
ENSODEG00000016417PTCD210076.302ENSTTRG00000011851PTCD29976.302Tursiops_truncatus
ENSODEG00000016417PTCD29774.324ENSUAMG00000007583PTCD28774.324Ursus_americanus
ENSODEG00000016417PTCD29774.054ENSUMAG00000007666PTCD29774.054Ursus_maritimus
ENSODEG00000016417PTCD210075.000ENSVPAG00000009597PTCD29975.000Vicugna_pacos
ENSODEG00000016417PTCD210072.063ENSVVUG00000007299-10072.063Vulpes_vulpes
ENSODEG00000016417PTCD29353.760ENSXETG00000031652PTCD29453.760Xenopus_tropicalis
ENSODEG00000016417PTCD28944.868ENSXMAG00000005940ptcd28543.869Xiphophorus_maculatus

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