EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000016439 (Gene tree)
Gene ID: 101568334
Gene Symbol: RRP12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 50168 bases
Position: chrJH651525.1:4975049-5025216
Accession: 101568334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022392	NUC173	PF08161.12	7.8e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022653	RRP12-201	3849	XM_004625690	ENSODEP00000022392	1282 (aa)	XP_004625747	-

Gene Model

Click here to download ENSODEG00000016439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016439	RRP12	99	87.741	ENSG00000052749	RRP12	100	90.909	Homo_sapiens
ENSODEG00000016439	RRP12	99	61.712	ENSAPOG00000013355	rrp12	100	60.876	Acanthochromis_polyacanthus
ENSODEG00000016439	RRP12	99	86.779	ENSAMEG00000000134	RRP12	99	87.067	Ailuropoda_melanoleuca
ENSODEG00000016439	RRP12	99	62.940	ENSACIG00000022673	rrp12	100	62.762	Amphilophus_citrinellus
ENSODEG00000016439	RRP12	99	62.345	ENSAOCG00000016149	rrp12	100	62.248	Amphiprion_ocellaris
ENSODEG00000016439	RRP12	99	62.112	ENSAPEG00000016023	rrp12	100	61.941	Amphiprion_percula
ENSODEG00000016439	RRP12	99	61.934	ENSATEG00000022627	rrp12	100	61.842	Anabas_testudineus
ENSODEG00000016439	RRP12	96	64.593	ENSAPLG00000014387	RRP12	99	64.434	Anas_platyrhynchos
ENSODEG00000016439	RRP12	99	65.123	ENSACAG00000002175	RRP12	99	64.742	Anolis_carolinensis
ENSODEG00000016439	RRP12	99	87.394	ENSANAG00000037485	RRP12	99	87.703	Aotus_nancymaae
ENSODEG00000016439	RRP12	99	62.637	ENSACLG00000007354	rrp12	100	62.616	Astatotilapia_calliptera
ENSODEG00000016439	RRP12	99	60.310	ENSAMXG00000012852	rrp12	99	60.404	Astyanax_mexicanus
ENSODEG00000016439	RRP12	99	87.731	ENSBTAG00000002191	RRP12	99	87.731	Bos_taurus
ENSODEG00000016439	RRP12	85	86.376	ENSCJAG00000016549	-	99	86.285	Callithrix_jacchus
ENSODEG00000016439	RRP12	99	86.836	ENSCAFG00000009043	RRP12	99	87.067	Canis_familiaris
ENSODEG00000016439	RRP12	99	86.836	ENSCAFG00020005991	RRP12	99	87.067	Canis_lupus_dingo
ENSODEG00000016439	RRP12	99	84.816	ENSCHIG00000011876	RRP12	99	84.509	Capra_hircus
ENSODEG00000016439	RRP12	53	83.333	ENSTSYG00000030210	-	99	83.908	Carlito_syrichta
ENSODEG00000016439	RRP12	96	83.816	ENSCAPG00000008991	RRP12	98	83.655	Cavia_aperea
ENSODEG00000016439	RRP12	100	92.337	ENSCPOG00000004215	RRP12	100	92.183	Cavia_porcellus
ENSODEG00000016439	RRP12	80	85.799	ENSCCAG00000024088	RRP12	99	89.277	Cebus_capucinus
ENSODEG00000016439	RRP12	70	84.083	ENSCCAG00000033123	-	83	84.742	Cebus_capucinus
ENSODEG00000016439	RRP12	99	80.707	ENSCATG00000045310	RRP12	99	81.154	Cercocebus_atys
ENSODEG00000016439	RRP12	100	93.189	ENSCLAG00000003753	RRP12	100	93.189	Chinchilla_lanigera
ENSODEG00000016439	RRP12	88	87.598	ENSCSAG00000005877	RRP12	99	87.686	Chlorocebus_sabaeus
ENSODEG00000016439	RRP12	60	92.308	ENSCHOG00000003095	-	61	92.308	Choloepus_hoffmanni
ENSODEG00000016439	RRP12	94	72.428	ENSCPBG00000011935	RRP12	97	72.346	Chrysemys_picta_bellii
ENSODEG00000016439	RRP12	63	39.021	ENSCSAVG00000006059	-	99	39.074	Ciona_savignyi
ENSODEG00000016439	RRP12	99	88.194	ENSCANG00000031653	RRP12	99	88.816	Colobus_angolensis_palliatus
ENSODEG00000016439	RRP12	90	88.386	ENSCGRG00001004338	Rrp12	99	88.130	Cricetulus_griseus_chok1gshd
ENSODEG00000016439	RRP12	99	86.553	ENSCGRG00000011965	Rrp12	99	86.321	Cricetulus_griseus_crigri
ENSODEG00000016439	RRP12	99	60.880	ENSCSEG00000007799	rrp12	99	61.270	Cynoglossus_semilaevis
ENSODEG00000016439	RRP12	99	63.232	ENSCVAG00000003418	rrp12	100	63.052	Cyprinodon_variegatus
ENSODEG00000016439	RRP12	99	59.322	ENSDARG00000022410	rrp12	99	60.279	Danio_rerio
ENSODEG00000016439	RRP12	100	85.978	ENSDNOG00000005120	RRP12	100	85.253	Dasypus_novemcinctus
ENSODEG00000016439	RRP12	99	88.649	ENSDORG00000009199	Rrp12	99	89.344	Dipodomys_ordii
ENSODEG00000016439	RRP12	93	74.147	ENSETEG00000002455	RRP12	93	74.147	Echinops_telfairi
ENSODEG00000016439	RRP12	87	58.667	ENSEBUG00000006555	rrp12	99	70.213	Eptatretus_burgeri
ENSODEG00000016439	RRP12	99	87.846	ENSEASG00005008693	RRP12	99	88.649	Equus_asinus_asinus
ENSODEG00000016439	RRP12	94	87.797	ENSECAG00000010892	RRP12	99	88.496	Equus_caballus
ENSODEG00000016439	RRP12	63	80.423	ENSEEUG00000005447	-	65	80.423	Erinaceus_europaeus
ENSODEG00000016439	RRP12	99	62.296	ENSELUG00000010510	rrp12	100	61.864	Esox_lucius
ENSODEG00000016439	RRP12	99	87.519	ENSFCAG00000028639	RRP12	99	90.132	Felis_catus
ENSODEG00000016439	RRP12	94	69.458	ENSFALG00000008458	RRP12	99	70.016	Ficedula_albicollis
ENSODEG00000016439	RRP12	99	91.479	ENSFDAG00000019108	RRP12	95	91.479	Fukomys_damarensis
ENSODEG00000016439	RRP12	99	57.644	ENSFHEG00000004148	rrp12	100	57.508	Fundulus_heteroclitus
ENSODEG00000016439	RRP12	99	57.220	ENSGMOG00000004188	rrp12	99	57.220	Gadus_morhua
ENSODEG00000016439	RRP12	99	68.976	ENSGALG00000041331	RRP12	96	70.880	Gallus_gallus
ENSODEG00000016439	RRP12	99	63.679	ENSGAFG00000009038	rrp12	100	63.573	Gambusia_affinis
ENSODEG00000016439	RRP12	99	60.391	ENSGACG00000007175	rrp12	100	60.233	Gasterosteus_aculeatus
ENSODEG00000016439	RRP12	67	75.173	ENSGAGG00000019169	RRP12	96	75.173	Gopherus_agassizii
ENSODEG00000016439	RRP12	99	87.818	ENSGGOG00000014850	RRP12	99	87.972	Gorilla_gorilla
ENSODEG00000016439	RRP12	99	62.793	ENSHBUG00000023527	rrp12	100	62.771	Haplochromis_burtoni
ENSODEG00000016439	RRP12	99	91.944	ENSHGLG00000016772	RRP12	99	91.944	Heterocephalus_glaber_female
ENSODEG00000016439	RRP12	99	91.944	ENSHGLG00100015110	RRP12	99	91.944	Heterocephalus_glaber_male
ENSODEG00000016439	RRP12	100	61.496	ENSHCOG00000019519	rrp12	100	61.341	Hippocampus_comes
ENSODEG00000016439	RRP12	100	59.892	ENSIPUG00000000311	RRP12	100	60.278	Ictalurus_punctatus
ENSODEG00000016439	RRP12	99	90.085	ENSSTOG00000006515	RRP12	99	90.163	Ictidomys_tridecemlineatus
ENSODEG00000016439	RRP12	96	88.853	ENSJJAG00000000110	Rrp12	99	88.773	Jaculus_jaculus
ENSODEG00000016439	RRP12	99	62.451	ENSKMAG00000020621	rrp12	100	62.277	Kryptolebias_marmoratus
ENSODEG00000016439	RRP12	99	60.422	ENSLBEG00000015335	rrp12	99	60.717	Labrus_bergylta
ENSODEG00000016439	RRP12	78	58.382	ENSLACG00000016633	RRP12	86	58.092	Latimeria_chalumnae
ENSODEG00000016439	RRP12	100	62.026	ENSLOCG00000003846	rrp12	100	61.687	Lepisosteus_oculatus
ENSODEG00000016439	RRP12	99	88.376	ENSLAFG00000015965	RRP12	99	88.222	Loxodonta_africana
ENSODEG00000016439	RRP12	99	87.963	ENSMFAG00000041558	RRP12	99	88.158	Macaca_fascicularis
ENSODEG00000016439	RRP12	99	87.963	ENSMMUG00000019634	RRP12	99	88.158	Macaca_mulatta
ENSODEG00000016439	RRP12	99	83.873	ENSMNEG00000036759	RRP12	99	88.158	Macaca_nemestrina
ENSODEG00000016439	RRP12	92	88.816	ENSMLEG00000041317	RRP12	99	88.816	Mandrillus_leucophaeus
ENSODEG00000016439	RRP12	99	62.009	ENSMAMG00000002964	rrp12	100	62.273	Mastacembelus_armatus
ENSODEG00000016439	RRP12	99	62.908	ENSMZEG00005003241	rrp12	100	62.771	Maylandia_zebra
ENSODEG00000016439	RRP12	99	67.588	ENSMGAG00000009829	RRP12	99	67.898	Meleagris_gallopavo
ENSODEG00000016439	RRP12	99	84.734	ENSMAUG00000020743	Rrp12	99	84.841	Mesocricetus_auratus
ENSODEG00000016439	RRP12	99	88.349	ENSMICG00000007624	RRP12	99	88.889	Microcebus_murinus
ENSODEG00000016439	RRP12	100	88.031	ENSMOCG00000006753	Rrp12	100	87.799	Microtus_ochrogaster
ENSODEG00000016439	RRP12	99	61.358	ENSMMOG00000010708	rrp12	99	61.358	Mola_mola
ENSODEG00000016439	RRP12	99	78.045	ENSMODG00000004315	RRP12	99	77.735	Monodelphis_domestica
ENSODEG00000016439	RRP12	99	59.436	ENSMALG00000016560	rrp12	98	62.747	Monopterus_albus
ENSODEG00000016439	RRP12	99	87.825	MGP_CAROLIEiJ_G0022957	Rrp12	99	87.443	Mus_caroli
ENSODEG00000016439	RRP12	99	88.717	ENSMUSG00000035049	Rrp12	99	88.331	Mus_musculus
ENSODEG00000016439	RRP12	100	88.803	MGP_PahariEiJ_G0014447	Rrp12	100	88.417	Mus_pahari
ENSODEG00000016439	RRP12	99	88.872	MGP_SPRETEiJ_G0023878	Rrp12	99	88.485	Mus_spretus
ENSODEG00000016439	RRP12	99	86.584	ENSMPUG00000017046	RRP12	99	87.047	Mustela_putorius_furo
ENSODEG00000016439	RRP12	99	88.154	ENSMLUG00000017160	RRP12	99	88.154	Myotis_lucifugus
ENSODEG00000016439	RRP12	99	89.018	ENSNGAG00000024144	Rrp12	99	89.018	Nannospalax_galili
ENSODEG00000016439	RRP12	99	62.588	ENSNBRG00000009987	rrp12	100	62.490	Neolamprologus_brichardi
ENSODEG00000016439	RRP12	92	88.816	ENSNLEG00000013762	RRP12	99	88.816	Nomascus_leucogenys
ENSODEG00000016439	RRP12	100	73.101	ENSMEUG00000003185	RRP12	100	72.776	Notamacropus_eugenii
ENSODEG00000016439	RRP12	94	83.604	ENSOPRG00000005001	RRP12	94	84.253	Ochotona_princeps
ENSODEG00000016439	RRP12	99	62.500	ENSONIG00000009528	rrp12	100	62.616	Oreochromis_niloticus
ENSODEG00000016439	RRP12	100	71.418	ENSOANG00000006560	RRP12	100	71.296	Ornithorhynchus_anatinus
ENSODEG00000016439	RRP12	99	88.003	ENSOCUG00000005662	RRP12	99	88.012	Oryctolagus_cuniculus
ENSODEG00000016439	RRP12	99	62.109	ENSORLG00000008688	rrp12	99	63.212	Oryzias_latipes
ENSODEG00000016439	RRP12	97	62.291	ENSORLG00020002355	rrp12	99	62.560	Oryzias_latipes_hni
ENSODEG00000016439	RRP12	99	62.344	ENSORLG00015006709	rrp12	100	62.432	Oryzias_latipes_hsok
ENSODEG00000016439	RRP12	97	62.291	ENSOMEG00000002609	rrp12	99	62.719	Oryzias_melastigma
ENSODEG00000016439	RRP12	99	86.733	ENSOGAG00000001626	RRP12	99	87.298	Otolemur_garnettii
ENSODEG00000016439	RRP12	99	86.287	ENSOARG00000009681	RRP12	99	86.287	Ovis_aries
ENSODEG00000016439	RRP12	99	87.177	ENSPPAG00000043885	RRP12	99	87.454	Pan_paniscus
ENSODEG00000016439	RRP12	99	87.442	ENSPPRG00000002029	RRP12	99	90.789	Panthera_pardus
ENSODEG00000016439	RRP12	97	86.556	ENSPTIG00000004428	RRP12	99	89.474	Panthera_tigris_altaica
ENSODEG00000016439	RRP12	99	87.273	ENSPTRG00000002806	RRP12	99	87.546	Pan_troglodytes
ENSODEG00000016439	RRP12	99	87.886	ENSPANG00000021360	RRP12	99	88.816	Papio_anubis
ENSODEG00000016439	RRP12	100	63.364	ENSPKIG00000016516	rrp12	99	63.441	Paramormyrops_kingsleyae
ENSODEG00000016439	RRP12	99	61.207	ENSPMGG00000020217	rrp12	100	60.964	Periophthalmus_magnuspinnatus
ENSODEG00000016439	RRP12	99	88.649	ENSPEMG00000008437	Rrp12	99	88.417	Peromyscus_maniculatus_bairdii
ENSODEG00000016439	RRP12	99	46.833	ENSPMAG00000007493	rrp12	80	57.228	Petromyzon_marinus
ENSODEG00000016439	RRP12	96	83.893	ENSPCIG00000002157	RRP12	100	78.079	Phascolarctos_cinereus
ENSODEG00000016439	RRP12	99	62.977	ENSPFOG00000014975	rrp12	100	62.800	Poecilia_formosa
ENSODEG00000016439	RRP12	99	62.822	ENSPLAG00000009840	rrp12	100	62.645	Poecilia_latipinna
ENSODEG00000016439	RRP12	99	63.133	ENSPMEG00000021871	rrp12	100	62.954	Poecilia_mexicana
ENSODEG00000016439	RRP12	99	62.393	ENSPREG00000020950	rrp12	100	62.384	Poecilia_reticulata
ENSODEG00000016439	RRP12	99	86.199	ENSPPYG00000002528	RRP12	99	86.276	Pongo_abelii
ENSODEG00000016439	RRP12	94	90.960	ENSPCAG00000008967	RRP12	94	90.960	Procavia_capensis
ENSODEG00000016439	RRP12	99	90.789	ENSPCOG00000014009	RRP12	99	90.789	Propithecus_coquereli
ENSODEG00000016439	RRP12	99	83.642	ENSPVAG00000003370	RRP12	100	83.642	Pteropus_vampyrus
ENSODEG00000016439	RRP12	99	62.862	ENSPNYG00000009451	rrp12	100	62.771	Pundamilia_nyererei
ENSODEG00000016439	RRP12	100	60.870	ENSPNAG00000007658	rrp12	100	61.491	Pygocentrus_nattereri
ENSODEG00000016439	RRP12	99	88.167	ENSRNOG00000048495	Rrp12	99	87.935	Rattus_norvegicus
ENSODEG00000016439	RRP12	99	87.886	ENSRBIG00000021296	RRP12	99	88.816	Rhinopithecus_bieti
ENSODEG00000016439	RRP12	99	87.963	ENSRROG00000032482	RRP12	99	88.816	Rhinopithecus_roxellana
ENSODEG00000016439	RRP12	99	87.723	ENSSBOG00000030992	RRP12	100	87.500	Saimiri_boliviensis_boliviensis
ENSODEG00000016439	RRP12	99	77.442	ENSSHAG00000018275	RRP12	99	77.442	Sarcophilus_harrisii
ENSODEG00000016439	RRP12	99	63.284	ENSSFOG00015016400	rrp12	99	63.284	Scleropages_formosus
ENSODEG00000016439	RRP12	99	61.012	ENSSMAG00000004047	rrp12	100	61.580	Scophthalmus_maximus
ENSODEG00000016439	RRP12	99	61.774	ENSSDUG00000022871	rrp12	100	61.449	Seriola_dumerili
ENSODEG00000016439	RRP12	99	61.671	ENSSLDG00000003038	rrp12	100	61.270	Seriola_lalandi_dorsalis
ENSODEG00000016439	RRP12	100	67.593	ENSSPUG00000012221	RRP12	100	68.133	Sphenodon_punctatus
ENSODEG00000016439	RRP12	99	62.058	ENSSPAG00000002261	rrp12	100	61.938	Stegastes_partitus
ENSODEG00000016439	RRP12	100	87.037	ENSSSCG00000010514	RRP12	100	86.883	Sus_scrofa
ENSODEG00000016439	RRP12	88	67.951	ENSTGUG00000009711	RRP12	100	68.126	Taeniopygia_guttata
ENSODEG00000016439	RRP12	100	59.002	ENSTRUG00000012017	rrp12	100	59.020	Takifugu_rubripes
ENSODEG00000016439	RRP12	100	62.162	ENSTNIG00000016522	rrp12	100	62.171	Tetraodon_nigroviridis
ENSODEG00000016439	RRP12	78	90.385	ENSTBEG00000004907	RRP12	80	90.385	Tupaia_belangeri
ENSODEG00000016439	RRP12	100	84.247	ENSTTRG00000009878	RRP12	100	84.247	Tursiops_truncatus
ENSODEG00000016439	RRP12	99	86.846	ENSUAMG00000009092	RRP12	99	87.000	Ursus_americanus
ENSODEG00000016439	RRP12	99	86.146	ENSUMAG00000021621	RRP12	99	86.146	Ursus_maritimus
ENSODEG00000016439	RRP12	99	86.579	ENSVVUG00000023168	RRP12	99	86.811	Vulpes_vulpes
ENSODEG00000016439	RRP12	99	66.176	ENSXETG00000003430	rrp12	99	65.944	Xenopus_tropicalis
ENSODEG00000016439	RRP12	90	64.322	ENSXCOG00000012082	rrp12	99	60.859	Xiphophorus_couchianus
ENSODEG00000016439	RRP12	99	63.027	ENSXMAG00000013498	rrp12	100	62.771	Xiphophorus_maculatus