EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016452 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 434 bases
Position: chrJH651526.1:15037153-15037586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022422	MRP-S32	PF10210.9	5.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022683	-	414	-	ENSODEP00000022422	137 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016452	-	99	78.873	ENSODEG00000012689	-	99	78.873
ENSODEG00000016452	-	82	85.714	ENSODEG00000008681	-	100	85.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016452	-	99	74.648	ENSG00000198015	MRPL42	99	73.239	Homo_sapiens
ENSODEG00000016452	-	72	75.238	ENSAMEG00000009832	MRPL42	82	73.333	Ailuropoda_melanoleuca
ENSODEG00000016452	-	64	60.920	ENSACIG00000017826	mrpl42	62	59.770	Amphilophus_citrinellus
ENSODEG00000016452	-	96	56.429	ENSAPLG00000015057	MRPL42	97	54.286	Anas_platyrhynchos
ENSODEG00000016452	-	99	56.338	ENSANAG00000036083	-	99	53.521	Aotus_nancymaae
ENSODEG00000016452	-	99	71.831	ENSANAG00000036935	-	99	70.423	Aotus_nancymaae
ENSODEG00000016452	-	88	69.291	ENSANAG00000033101	-	83	67.717	Aotus_nancymaae
ENSODEG00000016452	-	93	67.164	ENSANAG00000000692	-	93	65.672	Aotus_nancymaae
ENSODEG00000016452	-	99	77.465	ENSBTAG00000002708	MRPL42	99	76.056	Bos_taurus
ENSODEG00000016452	-	73	68.224	ENSBTAG00000052971	-	97	67.290	Bos_taurus
ENSODEG00000016452	-	99	74.648	ENSCJAG00000046971	MRPL42	99	73.239	Callithrix_jacchus
ENSODEG00000016452	-	64	80.460	ENSCAFG00020022967	-	75	78.161	Canis_lupus_dingo
ENSODEG00000016452	-	88	78.740	ENSCHIG00000014921	MRPL42	98	77.165	Capra_hircus
ENSODEG00000016452	-	64	85.057	ENSTSYG00000032810	-	79	82.759	Carlito_syrichta
ENSODEG00000016452	-	99	76.056	ENSTSYG00000006370	-	99	74.648	Carlito_syrichta
ENSODEG00000016452	-	91	69.466	ENSTSYG00000036466	-	89	67.939	Carlito_syrichta
ENSODEG00000016452	-	95	75.182	ENSCAPG00000016985	-	100	73.723	Cavia_aperea
ENSODEG00000016452	-	98	70.896	ENSCAPG00000015105	-	98	69.403	Cavia_aperea
ENSODEG00000016452	-	98	71.642	ENSCPOG00000008943	-	98	70.149	Cavia_porcellus
ENSODEG00000016452	-	95	83.942	ENSCPOG00000030015	-	99	81.119	Cavia_porcellus
ENSODEG00000016452	-	99	74.648	ENSCCAG00000031179	-	99	73.239	Cebus_capucinus
ENSODEG00000016452	-	88	70.866	ENSCCAG00000032203	-	76	69.291	Cebus_capucinus
ENSODEG00000016452	-	86	58.475	ENSCCAG00000029290	-	80	56.780	Cebus_capucinus
ENSODEG00000016452	-	99	73.944	ENSCATG00000037616	MRPL42	99	72.535	Cercocebus_atys
ENSODEG00000016452	-	99	80.986	ENSCLAG00000005421	MRPL42	99	79.577	Chinchilla_lanigera
ENSODEG00000016452	-	99	73.239	ENSCSAG00000003706	MRPL42	99	71.831	Chlorocebus_sabaeus
ENSODEG00000016452	-	84	63.934	ENSCPBG00000001581	MRPL42	88	59.231	Chrysemys_picta_bellii
ENSODEG00000016452	-	99	73.944	ENSCANG00000033457	MRPL42	99	72.535	Colobus_angolensis_palliatus
ENSODEG00000016452	-	98	68.085	ENSCGRG00001012694	-	97	65.957	Cricetulus_griseus_chok1gshd
ENSODEG00000016452	-	98	59.574	ENSCGRG00001003813	-	99	58.865	Cricetulus_griseus_chok1gshd
ENSODEG00000016452	-	98	68.085	ENSCGRG00000003801	Mrpl42	99	65.957	Cricetulus_griseus_crigri
ENSODEG00000016452	-	89	70.543	ENSDNOG00000049701	-	91	70.543	Dasypus_novemcinctus
ENSODEG00000016452	-	99	70.423	ENSDNOG00000032710	-	99	70.423	Dasypus_novemcinctus
ENSODEG00000016452	-	98	71.631	ENSDORG00000015571	Mrpl42	99	70.213	Dipodomys_ordii
ENSODEG00000016452	-	99	77.465	ENSEASG00005019361	MRPL42	99	76.056	Equus_asinus_asinus
ENSODEG00000016452	-	99	77.465	ENSECAG00000026888	MRPL42	99	76.056	Equus_caballus
ENSODEG00000016452	-	86	70.400	ENSFCAG00000040567	-	100	69.600	Felis_catus
ENSODEG00000016452	-	88	61.475	ENSFCAG00000036356	-	79	60.656	Felis_catus
ENSODEG00000016452	-	99	72.535	ENSFCAG00000037907	-	99	71.127	Felis_catus
ENSODEG00000016452	-	99	57.343	ENSFALG00000010717	MRPL42	96	55.245	Ficedula_albicollis
ENSODEG00000016452	-	98	78.723	ENSFDAG00000018129	MRPL42	99	77.305	Fukomys_damarensis
ENSODEG00000016452	-	94	57.353	ENSGALG00000011293	MRPL42	91	56.618	Gallus_gallus
ENSODEG00000016452	-	84	64.754	ENSGAGG00000010125	MRPL42	82	63.115	Gopherus_agassizii
ENSODEG00000016452	-	99	74.648	ENSGGOG00000022760	MRPL42	99	73.239	Gorilla_gorilla
ENSODEG00000016452	-	89	82.946	ENSHGLG00000007399	-	94	81.395	Heterocephalus_glaber_female
ENSODEG00000016452	-	84	81.148	ENSHGLG00000008248	-	98	79.508	Heterocephalus_glaber_female
ENSODEG00000016452	-	82	80.000	ENSHGLG00100013257	-	97	78.333	Heterocephalus_glaber_male
ENSODEG00000016452	-	88	82.677	ENSHGLG00100018317	-	89	81.102	Heterocephalus_glaber_male
ENSODEG00000016452	-	99	71.127	ENSSTOG00000026544	MRPL42	99	69.718	Ictidomys_tridecemlineatus
ENSODEG00000016452	-	100	51.370	ENSLACG00000006919	MRPL42	100	50.685	Latimeria_chalumnae
ENSODEG00000016452	-	82	72.500	ENSLAFG00000013779	MRPL42	85	71.667	Loxodonta_africana
ENSODEG00000016452	-	99	75.352	ENSMFAG00000032330	MRPL42	99	73.944	Macaca_fascicularis
ENSODEG00000016452	-	99	72.535	ENSMMUG00000016805	MRPL42	99	71.127	Macaca_mulatta
ENSODEG00000016452	-	99	74.648	ENSMNEG00000028853	MRPL42	99	73.239	Macaca_nemestrina
ENSODEG00000016452	-	99	73.944	ENSMLEG00000038104	MRPL42	99	72.535	Mandrillus_leucophaeus
ENSODEG00000016452	-	94	58.824	ENSMGAG00000011346	MRPL42	91	57.353	Meleagris_gallopavo
ENSODEG00000016452	-	98	63.830	ENSMAUG00000010057	-	99	63.830	Mesocricetus_auratus
ENSODEG00000016452	-	98	55.224	ENSMAUG00000018130	-	99	52.985	Mesocricetus_auratus
ENSODEG00000016452	-	63	81.395	ENSMICG00000045594	-	86	79.070	Microcebus_murinus
ENSODEG00000016452	-	90	76.154	ENSMICG00000035189	-	90	74.615	Microcebus_murinus
ENSODEG00000016452	-	64	80.460	ENSMICG00000028094	-	83	74.684	Microcebus_murinus
ENSODEG00000016452	-	86	76.000	ENSMICG00000036541	-	99	70.093	Microcebus_murinus
ENSODEG00000016452	-	99	76.056	ENSMICG00000032596	-	99	74.648	Microcebus_murinus
ENSODEG00000016452	-	98	68.794	ENSMOCG00000013541	-	99	65.957	Microtus_ochrogaster
ENSODEG00000016452	-	98	65.248	ENSMOCG00000004616	-	99	63.830	Microtus_ochrogaster
ENSODEG00000016452	-	98	66.667	MGP_CAROLIEiJ_G0015750	Mrpl42	99	66.667	Mus_caroli
ENSODEG00000016452	-	98	66.667	ENSMUSG00000062981	Mrpl42	99	66.667	Mus_musculus
ENSODEG00000016452	-	99	69.014	ENSMLUG00000023702	-	99	68.310	Myotis_lucifugus
ENSODEG00000016452	-	97	70.714	ENSMLUG00000025058	-	98	70.000	Myotis_lucifugus
ENSODEG00000016452	-	99	69.014	ENSMLUG00000029623	-	99	67.606	Myotis_lucifugus
ENSODEG00000016452	-	88	74.016	ENSNGAG00000000717	Mrpl42	99	71.875	Nannospalax_galili
ENSODEG00000016452	-	99	74.648	ENSNLEG00000005699	MRPL42	99	73.239	Nomascus_leucogenys
ENSODEG00000016452	-	99	66.901	ENSOPRG00000010967	MRPL42	99	64.085	Ochotona_princeps
ENSODEG00000016452	-	99	70.423	ENSOCUG00000010928	MRPL42	99	69.014	Oryctolagus_cuniculus
ENSODEG00000016452	-	99	66.197	ENSOGAG00000026395	-	99	64.789	Otolemur_garnettii
ENSODEG00000016452	-	99	73.239	ENSOGAG00000025686	-	99	70.423	Otolemur_garnettii
ENSODEG00000016452	-	99	74.648	ENSOGAG00000025600	-	99	71.831	Otolemur_garnettii
ENSODEG00000016452	-	99	68.310	ENSOGAG00000030438	-	100	66.901	Otolemur_garnettii
ENSODEG00000016452	-	99	66.901	ENSOGAG00000024156	-	99	65.493	Otolemur_garnettii
ENSODEG00000016452	-	99	69.014	ENSOGAG00000027617	-	99	66.901	Otolemur_garnettii
ENSODEG00000016452	-	99	69.718	ENSOGAG00000034004	-	99	66.901	Otolemur_garnettii
ENSODEG00000016452	-	88	79.528	ENSOARG00000015849	MRPL42	98	77.953	Ovis_aries
ENSODEG00000016452	-	99	73.944	ENSPPAG00000038254	MRPL42	99	72.535	Pan_paniscus
ENSODEG00000016452	-	86	71.200	ENSPPRG00000017935	-	100	70.400	Panthera_pardus
ENSODEG00000016452	-	88	62.810	ENSPPRG00000006533	-	79	61.983	Panthera_pardus
ENSODEG00000016452	-	99	71.831	ENSPPRG00000015755	-	99	70.423	Panthera_pardus
ENSODEG00000016452	-	99	72.535	ENSPPRG00000013218	-	99	71.127	Panthera_pardus
ENSODEG00000016452	-	99	71.831	ENSPTIG00000009394	-	99	70.423	Panthera_tigris_altaica
ENSODEG00000016452	-	99	72.535	ENSPTIG00000019099	-	99	71.127	Panthera_tigris_altaica
ENSODEG00000016452	-	84	64.000	ENSPTIG00000009717	-	89	69.369	Panthera_tigris_altaica
ENSODEG00000016452	-	99	73.944	ENSPTRG00000022791	MRPL42	99	72.535	Pan_troglodytes
ENSODEG00000016452	-	99	65.986	ENSPANG00000030179	MRPL42	99	64.626	Papio_anubis
ENSODEG00000016452	-	90	58.462	ENSPSIG00000010745	MRPL42	88	58.462	Pelodiscus_sinensis
ENSODEG00000016452	-	98	68.085	ENSPEMG00000020562	-	99	66.929	Peromyscus_maniculatus_bairdii
ENSODEG00000016452	-	99	56.081	ENSPCIG00000001472	-	76	55.405	Phascolarctos_cinereus
ENSODEG00000016452	-	99	74.648	ENSPPYG00000004833	MRPL42	99	73.239	Pongo_abelii
ENSODEG00000016452	-	82	72.269	ENSPCAG00000003791	MRPL42	100	72.269	Procavia_capensis
ENSODEG00000016452	-	88	76.562	ENSPCOG00000014986	-	91	75.000	Propithecus_coquereli
ENSODEG00000016452	-	99	72.535	ENSPCOG00000025008	-	99	71.127	Propithecus_coquereli
ENSODEG00000016452	-	99	57.746	ENSPCOG00000018896	-	99	55.634	Propithecus_coquereli
ENSODEG00000016452	-	53	59.722	ENSPVAG00000013736	-	60	58.333	Pteropus_vampyrus
ENSODEG00000016452	-	97	61.702	ENSRNOG00000021867	AABR07009508.1	98	60.284	Rattus_norvegicus
ENSODEG00000016452	-	98	67.376	ENSRNOG00000042740	Mrpl42	99	65.957	Rattus_norvegicus
ENSODEG00000016452	-	88	61.157	ENSRBIG00000044361	-	78	59.504	Rhinopithecus_bieti
ENSODEG00000016452	-	99	73.239	ENSRBIG00000011046	-	99	71.831	Rhinopithecus_bieti
ENSODEG00000016452	-	99	73.239	ENSRROG00000033949	MRPL42	99	71.831	Rhinopithecus_roxellana
ENSODEG00000016452	-	99	71.127	ENSSBOG00000009656	-	99	69.718	Saimiri_boliviensis_boliviensis
ENSODEG00000016452	-	82	58.929	ENSSBOG00000025086	-	100	56.250	Saimiri_boliviensis_boliviensis
ENSODEG00000016452	-	64	74.713	ENSSBOG00000027483	-	75	72.414	Saimiri_boliviensis_boliviensis
ENSODEG00000016452	-	82	53.659	ENSSFOG00015006975	mrpl42	82	52.893	Scleropages_formosus
ENSODEG00000016452	-	93	57.778	ENSSPUG00000015009	-	90	56.296	Sphenodon_punctatus
ENSODEG00000016452	-	63	56.842	ENSSPAG00000013637	mrpl42	73	55.789	Stegastes_partitus
ENSODEG00000016452	-	98	56.028	ENSSSCG00000036897	-	98	55.319	Sus_scrofa
ENSODEG00000016452	-	64	73.563	ENSSSCG00000035613	-	80	72.414	Sus_scrofa
ENSODEG00000016452	-	68	52.000	ENSSSCG00000034693	-	84	52.000	Sus_scrofa
ENSODEG00000016452	-	99	76.056	ENSSSCG00000030478	-	99	74.648	Sus_scrofa
ENSODEG00000016452	-	82	63.866	ENSTGUG00000008272	MRPL42	100	61.345	Taeniopygia_guttata
ENSODEG00000016452	-	59	51.136	ENSTNIG00000018478	mrpl42	66	50.000	Tetraodon_nigroviridis
ENSODEG00000016452	-	85	75.000	ENSTTRG00000003312	MRPL42	92	73.387	Tursiops_truncatus
ENSODEG00000016452	-	54	59.259	ENSUAMG00000019831	-	85	59.259	Ursus_americanus
ENSODEG00000016452	-	99	75.352	ENSUAMG00000025405	-	99	73.944	Ursus_americanus
ENSODEG00000016452	-	99	75.352	ENSUMAG00000003107	-	99	73.944	Ursus_maritimus
ENSODEG00000016452	-	83	63.636	ENSUMAG00000014643	-	75	63.636	Ursus_maritimus
ENSODEG00000016452	-	82	73.950	ENSVPAG00000007658	MRPL42	100	72.269	Vicugna_pacos
ENSODEG00000016452	-	50	68.000	ENSVVUG00000007253	-	96	68.000	Vulpes_vulpes
ENSODEG00000016452	-	50	65.789	ENSVVUG00000002834	-	94	65.789	Vulpes_vulpes
ENSODEG00000016452	-	99	72.535	ENSVVUG00000011842	-	99	71.127	Vulpes_vulpes
ENSODEG00000016452	-	64	56.180	ENSXMAG00000004057	mrpl42	65	55.172	Xiphophorus_maculatus