EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016477 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pumilio homolog 3-like
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2220 bases
Position: chrJH651525.1:5732934-5735153
Accession: 101580801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022456	CPL	PF08144.11	3e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022717	-	1869	XM_012513495	ENSODEP00000022456	622 (aa)	XP_012368949	-

Gene Model

Click here to download ENSODEG00000016477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016477	-	100	92.923	ENSODEG00000003625	-	99	92.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016477	-	99	84.615	ENSG00000080608	PUM3	99	84.615	Homo_sapiens
ENSODEG00000016477	-	92	51.827	ENSAPOG00000020252	pum3	99	50.154	Acanthochromis_polyacanthus
ENSODEG00000016477	-	100	84.000	ENSAMEG00000012187	PUM3	100	84.000	Ailuropoda_melanoleuca
ENSODEG00000016477	-	86	51.510	ENSACIG00000009786	pum3	92	51.510	Amphilophus_citrinellus
ENSODEG00000016477	-	92	52.492	ENSAOCG00000004439	pum3	99	50.923	Amphiprion_ocellaris
ENSODEG00000016477	-	92	52.492	ENSAPEG00000020523	pum3	99	50.923	Amphiprion_percula
ENSODEG00000016477	-	82	57.542	ENSATEG00000005799	pum3	96	53.635	Anabas_testudineus
ENSODEG00000016477	-	96	67.360	ENSAPLG00000002920	PUM3	100	67.360	Anas_platyrhynchos
ENSODEG00000016477	-	93	62.664	ENSACAG00000003174	PUM3	99	64.463	Anolis_carolinensis
ENSODEG00000016477	-	99	85.031	ENSANAG00000024520	PUM3	99	84.900	Aotus_nancymaae
ENSODEG00000016477	-	95	51.840	ENSACLG00000001017	pum3	99	51.840	Astatotilapia_calliptera
ENSODEG00000016477	-	91	60.667	ENSAMXG00000020911	pum3	93	60.667	Astyanax_mexicanus
ENSODEG00000016477	-	100	84.000	ENSBTAG00000013357	PUM3	100	84.000	Bos_taurus
ENSODEG00000016477	-	74	30.986	WBGene00014165	puf-12	64	30.986	Caenorhabditis_elegans
ENSODEG00000016477	-	99	82.897	ENSCJAG00000010917	PUM3	99	82.897	Callithrix_jacchus
ENSODEG00000016477	-	100	83.538	ENSCAFG00000002035	PUM3	99	83.538	Canis_familiaris
ENSODEG00000016477	-	100	83.538	ENSCAFG00020026867	PUM3	99	83.538	Canis_lupus_dingo
ENSODEG00000016477	-	100	83.538	ENSCHIG00000021559	PUM3	100	83.538	Capra_hircus
ENSODEG00000016477	-	100	84.462	ENSTSYG00000007481	PUM3	100	84.462	Carlito_syrichta
ENSODEG00000016477	-	100	82.949	ENSCAPG00000010592	-	99	82.949	Cavia_aperea
ENSODEG00000016477	-	100	84.615	ENSCPOG00000008552	-	99	84.615	Cavia_porcellus
ENSODEG00000016477	-	99	83.821	ENSCCAG00000032650	PUM3	99	83.821	Cebus_capucinus
ENSODEG00000016477	-	99	85.208	ENSCATG00000024880	PUM3	99	85.208	Cercocebus_atys
ENSODEG00000016477	-	100	88.000	ENSCLAG00000011892	PUM3	99	88.000	Chinchilla_lanigera
ENSODEG00000016477	-	99	85.362	ENSCSAG00000008691	PUM3	99	85.362	Chlorocebus_sabaeus
ENSODEG00000016477	-	91	76.887	ENSCHOG00000002535	PUM3	87	76.887	Choloepus_hoffmanni
ENSODEG00000016477	-	100	66.769	ENSCPBG00000025470	PUM3	95	66.769	Chrysemys_picta_bellii
ENSODEG00000016477	-	80	37.273	ENSCING00000024199	-	96	37.387	Ciona_intestinalis
ENSODEG00000016477	-	86	37.759	ENSCSAVG00000006072	-	99	38.185	Ciona_savignyi
ENSODEG00000016477	-	99	85.208	ENSCANG00000006142	PUM3	99	85.208	Colobus_angolensis_palliatus
ENSODEG00000016477	-	100	83.538	ENSCGRG00001016402	Pum3	99	83.538	Cricetulus_griseus_chok1gshd
ENSODEG00000016477	-	100	83.538	ENSCGRG00000010207	Pum3	99	83.538	Cricetulus_griseus_crigri
ENSODEG00000016477	-	88	51.448	ENSCSEG00000001565	pum3	99	51.438	Cynoglossus_semilaevis
ENSODEG00000016477	-	62	48.897	ENSCVAG00000006550	pum3	98	48.718	Cyprinodon_variegatus
ENSODEG00000016477	-	93	62.440	ENSDARG00000087779	pum3	98	62.440	Danio_rerio
ENSODEG00000016477	-	100	73.416	ENSDNOG00000008157	PUM3	70	73.798	Dasypus_novemcinctus
ENSODEG00000016477	-	81	77.170	ENSETEG00000015331	PUM3	84	77.596	Echinops_telfairi
ENSODEG00000016477	-	79	38.432	ENSEBUG00000011586	pum3	88	35.552	Eptatretus_burgeri
ENSODEG00000016477	-	99	84.746	ENSEASG00005010350	PUM3	99	84.746	Equus_asinus_asinus
ENSODEG00000016477	-	99	84.900	ENSECAG00000017193	PUM3	99	84.900	Equus_caballus
ENSODEG00000016477	-	93	74.752	ENSEEUG00000010314	PUM3	91	81.395	Erinaceus_europaeus
ENSODEG00000016477	-	95	58.400	ENSELUG00000002215	pum3	96	58.400	Esox_lucius
ENSODEG00000016477	-	100	65.954	ENSFALG00000010509	PUM3	100	65.954	Ficedula_albicollis
ENSODEG00000016477	-	100	88.000	ENSFDAG00000021027	PUM3	99	88.000	Fukomys_damarensis
ENSODEG00000016477	-	91	54.948	ENSFHEG00000015576	pum3	99	54.948	Fundulus_heteroclitus
ENSODEG00000016477	-	82	56.772	ENSGMOG00000014217	pum3	99	56.772	Gadus_morhua
ENSODEG00000016477	-	95	67.585	ENSGALG00000010178	PUM3	96	66.984	Gallus_gallus
ENSODEG00000016477	-	54	55.769	ENSGAFG00000001930	pum3	62	55.769	Gambusia_affinis
ENSODEG00000016477	-	81	55.431	ENSGACG00000017878	pum3	97	55.431	Gasterosteus_aculeatus
ENSODEG00000016477	-	100	66.923	ENSGAGG00000018983	PUM3	100	66.404	Gopherus_agassizii
ENSODEG00000016477	-	99	85.054	ENSGGOG00000006143	PUM3	99	85.054	Gorilla_gorilla
ENSODEG00000016477	-	99	45.954	ENSHBUG00000012903	pum3	99	45.344	Haplochromis_burtoni
ENSODEG00000016477	-	100	87.846	ENSHGLG00000015868	-	99	87.846	Heterocephalus_glaber_female
ENSODEG00000016477	-	100	87.846	ENSHGLG00100018825	PUM3	100	87.846	Heterocephalus_glaber_male
ENSODEG00000016477	-	90	53.630	ENSHCOG00000010306	pum3	88	53.454	Hippocampus_comes
ENSODEG00000016477	-	86	62.721	ENSIPUG00000024801	pum3	93	60.697	Ictalurus_punctatus
ENSODEG00000016477	-	99	85.516	ENSSTOG00000009586	PUM3	99	85.516	Ictidomys_tridecemlineatus
ENSODEG00000016477	-	99	81.356	ENSJJAG00000012563	Pum3	99	81.356	Jaculus_jaculus
ENSODEG00000016477	-	88	54.389	ENSKMAG00000010277	pum3	97	52.366	Kryptolebias_marmoratus
ENSODEG00000016477	-	97	51.577	ENSLBEG00000012213	pum3	93	51.577	Labrus_bergylta
ENSODEG00000016477	-	100	59.697	ENSLACG00000008312	PUM3	100	60.823	Latimeria_chalumnae
ENSODEG00000016477	-	92	63.289	ENSLOCG00000012529	pum3	93	63.289	Lepisosteus_oculatus
ENSODEG00000016477	-	100	82.308	ENSLAFG00000017341	PUM3	99	82.308	Loxodonta_africana
ENSODEG00000016477	-	99	85.516	ENSMFAG00000001430	PUM3	99	85.516	Macaca_fascicularis
ENSODEG00000016477	-	99	85.516	ENSMMUG00000002362	PUM3	98	85.516	Macaca_mulatta
ENSODEG00000016477	-	99	85.516	ENSMNEG00000035288	PUM3	99	85.516	Macaca_nemestrina
ENSODEG00000016477	-	99	85.824	ENSMLEG00000034820	PUM3	99	85.824	Mandrillus_leucophaeus
ENSODEG00000016477	-	82	56.238	ENSMAMG00000022861	pum3	98	50.075	Mastacembelus_armatus
ENSODEG00000016477	-	95	51.846	ENSMZEG00005014205	pum3	97	51.846	Maylandia_zebra
ENSODEG00000016477	-	98	59.409	ENSMGAG00000002255	PUM3	99	62.522	Meleagris_gallopavo
ENSODEG00000016477	-	100	83.077	ENSMAUG00000009733	Pum3	99	83.077	Mesocricetus_auratus
ENSODEG00000016477	-	99	85.362	ENSMICG00000045916	PUM3	87	85.362	Microcebus_murinus
ENSODEG00000016477	-	100	80.154	ENSMOCG00000014830	-	100	80.154	Microtus_ochrogaster
ENSODEG00000016477	-	100	83.692	ENSMOCG00000019519	-	99	83.692	Microtus_ochrogaster
ENSODEG00000016477	-	91	51.333	ENSMMOG00000012184	pum3	96	51.333	Mola_mola
ENSODEG00000016477	-	100	67.488	ENSMODG00000015417	PUM3	100	67.488	Monodelphis_domestica
ENSODEG00000016477	-	82	55.762	ENSMALG00000022164	pum3	93	50.528	Monopterus_albus
ENSODEG00000016477	-	100	82.308	MGP_CAROLIEiJ_G0022845	Pum3	99	82.308	Mus_caroli
ENSODEG00000016477	-	100	82.615	ENSMUSG00000041360	Pum3	99	82.615	Mus_musculus
ENSODEG00000016477	-	99	82.743	MGP_PahariEiJ_G0014338	Pum3	99	82.743	Mus_pahari
ENSODEG00000016477	-	100	82.462	MGP_SPRETEiJ_G0023763	Pum3	99	82.462	Mus_spretus
ENSODEG00000016477	-	100	81.538	ENSMPUG00000005125	PUM3	100	81.538	Mustela_putorius_furo
ENSODEG00000016477	-	99	83.205	ENSMLUG00000002309	PUM3	99	83.205	Myotis_lucifugus
ENSODEG00000016477	-	100	80.521	ENSNGAG00000019468	Pum3	100	80.521	Nannospalax_galili
ENSODEG00000016477	-	93	50.980	ENSNBRG00000021370	pum3	95	50.980	Neolamprologus_brichardi
ENSODEG00000016477	-	99	85.054	ENSNLEG00000008712	PUM3	99	85.054	Nomascus_leucogenys
ENSODEG00000016477	-	74	53.653	ENSMEUG00000013606	-	78	76.623	Notamacropus_eugenii
ENSODEG00000016477	-	79	72.093	ENSOPRG00000004225	-	79	72.093	Ochotona_princeps
ENSODEG00000016477	-	95	50.612	ENSONIG00000012733	pum3	99	50.612	Oreochromis_niloticus
ENSODEG00000016477	-	81	71.241	ENSOANG00000014995	PUM3	100	71.869	Ornithorhynchus_anatinus
ENSODEG00000016477	-	99	82.689	ENSOCUG00000026104	-	100	82.689	Oryctolagus_cuniculus
ENSODEG00000016477	-	100	83.538	ENSOCUG00000004189	-	100	83.538	Oryctolagus_cuniculus
ENSODEG00000016477	-	94	49.837	ENSORLG00000014935	pum3	92	49.837	Oryzias_latipes
ENSODEG00000016477	-	94	49.837	ENSORLG00020002841	pum3	92	49.837	Oryzias_latipes_hni
ENSODEG00000016477	-	99	48.036	ENSORLG00015015906	pum3	99	48.036	Oryzias_latipes_hsok
ENSODEG00000016477	-	94	50.489	ENSOMEG00000009427	pum3	92	50.489	Oryzias_melastigma
ENSODEG00000016477	-	99	64.043	ENSOGAG00000033481	-	99	63.580	Otolemur_garnettii
ENSODEG00000016477	-	100	84.025	ENSOGAG00000008125	-	100	84.025	Otolemur_garnettii
ENSODEG00000016477	-	100	82.975	ENSOARG00000013337	PUM3	100	82.975	Ovis_aries
ENSODEG00000016477	-	99	85.077	ENSPPAG00000041337	PUM3	99	85.077	Pan_paniscus
ENSODEG00000016477	-	100	83.231	ENSPPRG00000000809	PUM3	100	83.231	Panthera_pardus
ENSODEG00000016477	-	100	83.538	ENSPTIG00000021934	PUM3	100	83.538	Panthera_tigris_altaica
ENSODEG00000016477	-	99	85.231	ENSPTRG00000020735	PUM3	99	85.231	Pan_troglodytes
ENSODEG00000016477	-	99	85.824	ENSPANG00000025118	PUM3	99	85.824	Papio_anubis
ENSODEG00000016477	-	99	58.673	ENSPKIG00000022249	pum3	97	60.616	Paramormyrops_kingsleyae
ENSODEG00000016477	-	100	66.923	ENSPSIG00000016272	PUM3	100	66.923	Pelodiscus_sinensis
ENSODEG00000016477	-	75	56.680	ENSPMGG00000021261	pum3	98	56.680	Periophthalmus_magnuspinnatus
ENSODEG00000016477	-	100	69.735	ENSPEMG00000019340	-	100	80.189	Peromyscus_maniculatus_bairdii
ENSODEG00000016477	-	100	67.075	ENSPCIG00000030598	PUM3	98	67.075	Phascolarctos_cinereus
ENSODEG00000016477	-	91	52.492	ENSPFOG00000001719	pum3	98	52.492	Poecilia_formosa
ENSODEG00000016477	-	95	50.553	ENSPLAG00000020010	pum3	98	51.343	Poecilia_latipinna
ENSODEG00000016477	-	95	51.104	ENSPMEG00000017451	pum3	98	51.577	Poecilia_mexicana
ENSODEG00000016477	-	51	40.465	ENSPREG00000019478	-	80	37.288	Poecilia_reticulata
ENSODEG00000016477	-	99	85.208	ENSPPYG00000019255	PUM3	99	85.208	Pongo_abelii
ENSODEG00000016477	-	91	78.066	ENSPCAG00000005797	PUM3	87	78.066	Procavia_capensis
ENSODEG00000016477	-	100	84.769	ENSPCOG00000027325	PUM3	100	84.769	Propithecus_coquereli
ENSODEG00000016477	-	100	82.154	ENSPVAG00000016135	PUM3	95	82.154	Pteropus_vampyrus
ENSODEG00000016477	-	95	52.154	ENSPNYG00000016124	pum3	99	52.154	Pundamilia_nyererei
ENSODEG00000016477	-	95	59.744	ENSPNAG00000026524	pum3	99	59.744	Pygocentrus_nattereri
ENSODEG00000016477	-	100	80.308	ENSRNOG00000048356	RGD1308750	100	80.308	Rattus_norvegicus
ENSODEG00000016477	-	100	80.462	ENSRNOG00000012574	Pum3	100	80.462	Rattus_norvegicus
ENSODEG00000016477	-	99	85.054	ENSRBIG00000036924	PUM3	99	85.054	Rhinopithecus_bieti
ENSODEG00000016477	-	99	85.054	ENSRROG00000041089	PUM3	99	85.054	Rhinopithecus_roxellana
ENSODEG00000016477	-	99	85.208	ENSSBOG00000028066	PUM3	99	85.208	Saimiri_boliviensis_boliviensis
ENSODEG00000016477	-	100	73.702	ENSSHAG00000003730	PUM3	100	72.086	Sarcophilus_harrisii
ENSODEG00000016477	-	93	59.306	ENSSFOG00015018778	pum3	98	59.306	Scleropages_formosus
ENSODEG00000016477	-	81	57.303	ENSSMAG00000013236	pum3	93	53.355	Scophthalmus_maximus
ENSODEG00000016477	-	89	54.167	ENSSDUG00000001887	pum3	99	51.032	Seriola_dumerili
ENSODEG00000016477	-	91	53.344	ENSSLDG00000015766	pum3	99	51.574	Seriola_lalandi_dorsalis
ENSODEG00000016477	-	95	80.225	ENSSARG00000000579	PUM3	100	80.225	Sorex_araneus
ENSODEG00000016477	-	97	65.877	ENSSPUG00000001707	PUM3	100	65.138	Sphenodon_punctatus
ENSODEG00000016477	-	82	55.576	ENSSPAG00000003976	pum3	83	55.576	Stegastes_partitus
ENSODEG00000016477	-	100	83.846	ENSSSCG00000005227	PUM3	99	83.846	Sus_scrofa
ENSODEG00000016477	-	100	65.385	ENSTGUG00000005339	PUM3	100	65.385	Taeniopygia_guttata
ENSODEG00000016477	-	95	51.672	ENSTRUG00000004074	pum3	98	51.672	Takifugu_rubripes
ENSODEG00000016477	-	89	54.872	ENSTNIG00000010325	pum3	97	54.276	Tetraodon_nigroviridis
ENSODEG00000016477	-	85	67.084	ENSTBEG00000013058	PUM3	86	67.084	Tupaia_belangeri
ENSODEG00000016477	-	91	84.906	ENSTTRG00000001062	PUM3	88	84.906	Tursiops_truncatus
ENSODEG00000016477	-	100	76.434	ENSUMAG00000018443	PUM3	100	79.962	Ursus_maritimus
ENSODEG00000016477	-	100	84.178	ENSVPAG00000010766	PUM3	99	84.178	Vicugna_pacos
ENSODEG00000016477	-	100	83.538	ENSVVUG00000006527	PUM3	99	83.538	Vulpes_vulpes
ENSODEG00000016477	-	99	55.505	ENSXETG00000011707	pum3	99	55.505	Xenopus_tropicalis
ENSODEG00000016477	-	91	49.668	ENSXCOG00000006725	pum3	99	49.668	Xiphophorus_couchianus
ENSODEG00000016477	-	95	50.316	ENSXMAG00000002926	pum3	98	50.316	Xiphophorus_maculatus