EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016510 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1269 bases
Position: chrJH651552.1:14749745-14751013
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022499	RRM_1	PF00076.22	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022760	-	408	-	ENSODEP00000022499	135 (aa)	-	UPI000002B37D

Gene Model

Click here to download ENSODEG00000016510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016510	-	50	38.028	ENSODEG00000000843	-	66	37.634
ENSODEG00000016510	-	62	32.143	ENSODEG00000019143	-	58	32.143
ENSODEG00000016510	-	56	34.667	ENSODEG00000020039	-	52	34.667
ENSODEG00000016510	-	50	32.895	ENSODEG00000019234	-	58	31.868
ENSODEG00000016510	-	51	47.297	ENSODEG00000006061	SRSF9	61	47.297
ENSODEG00000016510	-	56	34.667	ENSODEG00000017717	RBM14	52	34.667
ENSODEG00000016510	-	56	34.667	ENSODEG00000006635	-	59	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016510	-	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSODEG00000016510	-	58	93.590	ENSAPOG00000016635	-	52	91.566	Acanthochromis_polyacanthus
ENSODEG00000016510	-	63	87.059	ENSACIG00000020091	-	81	87.059	Amphilophus_citrinellus
ENSODEG00000016510	-	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSODEG00000016510	-	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSODEG00000016510	-	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSODEG00000016510	-	55	91.892	ENSAMXG00000042692	-	74	75.000	Astyanax_mexicanus
ENSODEG00000016510	-	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSODEG00000016510	-	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSODEG00000016510	-	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSODEG00000016510	-	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSODEG00000016510	-	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSODEG00000016510	-	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSODEG00000016510	-	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSODEG00000016510	-	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSODEG00000016510	-	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSODEG00000016510	-	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSODEG00000016510	-	58	93.590	ENSCSEG00000019778	SRSF6	67	87.640	Cynoglossus_semilaevis
ENSODEG00000016510	-	58	92.308	ENSCVAG00000001863	SRSF6	82	90.361	Cyprinodon_variegatus
ENSODEG00000016510	-	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSODEG00000016510	-	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSODEG00000016510	-	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSODEG00000016510	-	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSODEG00000016510	-	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSODEG00000016510	-	58	92.308	ENSGAFG00000019088	-	57	77.000	Gambusia_affinis
ENSODEG00000016510	-	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSODEG00000016510	-	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSODEG00000016510	-	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSODEG00000016510	-	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSODEG00000016510	-	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSODEG00000016510	-	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSODEG00000016510	-	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSODEG00000016510	-	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSODEG00000016510	-	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSODEG00000016510	-	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSODEG00000016510	-	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSODEG00000016510	-	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSODEG00000016510	-	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSODEG00000016510	-	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSODEG00000016510	-	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSODEG00000016510	-	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSODEG00000016510	-	58	94.872	ENSORLG00020017506	srsf6a	59	83.333	Oryzias_latipes_hni
ENSODEG00000016510	-	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSODEG00000016510	-	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSODEG00000016510	-	59	77.500	ENSPKIG00000015703	-	61	77.500	Paramormyrops_kingsleyae
ENSODEG00000016510	-	98	62.121	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSODEG00000016510	-	58	93.590	ENSPKIG00000015603	-	60	91.667	Paramormyrops_kingsleyae
ENSODEG00000016510	-	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSODEG00000016510	-	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSODEG00000016510	-	58	92.308	ENSPLAG00000009243	srsf6a	52	89.157	Poecilia_latipinna
ENSODEG00000016510	-	59	91.139	ENSPREG00000001040	srsf6a	66	77.000	Poecilia_reticulata
ENSODEG00000016510	-	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSODEG00000016510	-	59	95.000	ENSPNAG00000023179	-	62	95.000	Pygocentrus_nattereri
ENSODEG00000016510	-	100	96.296	ENSRBIG00000041414	SRSF6	100	96.296	Rhinopithecus_bieti
ENSODEG00000016510	-	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSODEG00000016510	-	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000016510	-	59	92.500	ENSSMAG00000014861	-	70	84.043	Scophthalmus_maximus
ENSODEG00000016510	-	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSODEG00000016510	-	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSODEG00000016510	-	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSODEG00000016510	-	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSODEG00000016510	-	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSODEG00000016510	-	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSODEG00000016510	-	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes