EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016524 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1790 bases
Position: chrJH651516.1:30992482-30994271
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022517	Tudor-knot	PF11717.8	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022778	-	1209	-	ENSODEP00000022517	402 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016524	-	93	84.158	ENSODEG00000017848	KAT5	79	84.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016524	-	92	70.133	ENSAPOG00000016436	kat5b	74	70.133	Acanthochromis_polyacanthus
ENSODEG00000016524	-	93	69.169	ENSACIG00000010425	kat5b	76	69.169	Amphilophus_citrinellus
ENSODEG00000016524	-	93	65.542	ENSAOCG00000014287	kat5b	79	65.542	Amphiprion_ocellaris
ENSODEG00000016524	-	93	65.133	ENSAPEG00000001944	kat5b	79	65.133	Amphiprion_percula
ENSODEG00000016524	-	91	68.602	ENSATEG00000016047	kat5b	73	68.602	Anabas_testudineus
ENSODEG00000016524	-	91	63.366	ENSACLG00000015105	kat5b	79	61.215	Astatotilapia_calliptera
ENSODEG00000016524	-	93	68.638	ENSAMXG00000009091	kat5b	85	63.830	Astyanax_mexicanus
ENSODEG00000016524	-	93	47.059	WBGene00007029	mys-1	70	47.059	Caenorhabditis_elegans
ENSODEG00000016524	-	91	55.041	ENSCSAVG00000004784	-	74	55.041	Ciona_savignyi
ENSODEG00000016524	-	93	68.365	ENSCSEG00000014541	kat5b	76	68.365	Cynoglossus_semilaevis
ENSODEG00000016524	-	75	86.802	ENSCVAG00000012685	kat5b	66	86.802	Cyprinodon_variegatus
ENSODEG00000016524	-	93	64.569	ENSDARG00000045951	kat5b	80	64.569	Danio_rerio
ENSODEG00000016524	-	91	64.461	ENSDARG00000004587	kat5b	98	55.678	Danio_rerio
ENSODEG00000016524	-	92	49.403	FBgn0026080	Tip60	87	50.238	Drosophila_melanogaster
ENSODEG00000016524	-	90	63.271	ENSEBUG00000001775	kat5b	100	63.271	Eptatretus_burgeri
ENSODEG00000016524	-	90	86.294	ENSELUG00000016941	kat5b	77	68.449	Esox_lucius
ENSODEG00000016524	-	91	64.452	ENSFHEG00000003516	kat5b	79	64.452	Fundulus_heteroclitus
ENSODEG00000016524	-	90	86.802	ENSGAFG00000004081	kat5b	65	86.802	Gambusia_affinis
ENSODEG00000016524	-	91	67.819	ENSGACG00000020408	kat5b	99	68.090	Gasterosteus_aculeatus
ENSODEG00000016524	-	91	77.907	ENSHBUG00000023213	kat5b	75	68.120	Haplochromis_burtoni
ENSODEG00000016524	-	93	64.891	ENSHCOG00000002064	kat5b	79	65.375	Hippocampus_comes
ENSODEG00000016524	-	93	67.560	ENSIPUG00000014489	kat5b	76	67.560	Ictalurus_punctatus
ENSODEG00000016524	-	92	87.692	ENSKMAG00000009020	kat5b	70	87.692	Kryptolebias_marmoratus
ENSODEG00000016524	-	91	68.120	ENSLBEG00000024629	-	70	68.120	Labrus_bergylta
ENSODEG00000016524	-	91	68.120	ENSLBEG00000011107	-	70	68.120	Labrus_bergylta
ENSODEG00000016524	-	91	65.347	ENSMAMG00000016643	kat5b	76	65.347	Mastacembelus_armatus
ENSODEG00000016524	-	91	77.907	ENSMZEG00005016654	kat5b	78	65.085	Maylandia_zebra
ENSODEG00000016524	-	91	65.672	ENSMMOG00000016639	kat5b	79	65.672	Mola_mola
ENSODEG00000016524	-	91	87.310	ENSMALG00000017235	kat5b	72	87.310	Monopterus_albus
ENSODEG00000016524	-	91	62.264	ENSONIG00000005359	kat5b	78	61.085	Oreochromis_niloticus
ENSODEG00000016524	-	78	87.179	ENSORLG00000007458	kat5b	67	88.083	Oryzias_latipes
ENSODEG00000016524	-	91	62.238	ENSORLG00020004495	kat5b	78	62.295	Oryzias_latipes_hni
ENSODEG00000016524	-	91	87.179	ENSORLG00015009730	kat5b	67	88.083	Oryzias_latipes_hsok
ENSODEG00000016524	-	90	87.692	ENSOMEG00000002350	kat5b	65	87.692	Oryzias_melastigma
ENSODEG00000016524	-	90	86.294	ENSPKIG00000019383	kat5b	65	86.294	Paramormyrops_kingsleyae
ENSODEG00000016524	-	91	88.083	ENSPMGG00000020103	kat5b	68	88.083	Periophthalmus_magnuspinnatus
ENSODEG00000016524	-	92	60.914	ENSPMAG00000008957	kat5b	78	60.914	Petromyzon_marinus
ENSODEG00000016524	-	91	64.784	ENSPFOG00000010293	kat5b	79	64.784	Poecilia_formosa
ENSODEG00000016524	-	91	64.784	ENSPLAG00000015158	kat5b	79	64.784	Poecilia_latipinna
ENSODEG00000016524	-	93	68.633	ENSPMEG00000008824	kat5b	79	64.784	Poecilia_mexicana
ENSODEG00000016524	-	90	86.802	ENSPREG00000022986	kat5b	65	86.802	Poecilia_reticulata
ENSODEG00000016524	-	91	63.366	ENSPNYG00000017128	kat5b	79	61.449	Pundamilia_nyererei
ENSODEG00000016524	-	94	67.282	ENSPNAG00000022600	-	75	67.282	Pygocentrus_nattereri
ENSODEG00000016524	-	91	65.664	ENSPNAG00000003741	-	78	65.664	Pygocentrus_nattereri
ENSODEG00000016524	-	87	82.275	ENSSHAG00000001928	-	78	82.275	Sarcophilus_harrisii
ENSODEG00000016524	-	76	85.787	ENSSFOG00015005779	kat5	79	65.122	Scleropages_formosus
ENSODEG00000016524	-	76	86.802	ENSSMAG00000013982	kat5b	81	64.784	Scophthalmus_maximus
ENSODEG00000016524	-	92	62.037	ENSSDUG00000010863	kat5b	80	60.684	Seriola_dumerili
ENSODEG00000016524	-	92	56.098	ENSSLDG00000018594	kat5b	81	56.098	Seriola_lalandi_dorsalis
ENSODEG00000016524	-	93	66.071	ENSSPAG00000016282	kat5b	78	66.071	Stegastes_partitus
ENSODEG00000016524	-	71	88.601	ENSTRUG00000016643	kat5b	70	88.601	Takifugu_rubripes
ENSODEG00000016524	-	91	67.150	ENSTNIG00000011743	kat5b	78	67.150	Tetraodon_nigroviridis
ENSODEG00000016524	-	90	77.525	ENSUMAG00000010712	-	76	80.423	Ursus_maritimus
ENSODEG00000016524	-	92	57.895	ENSXETG00000020586	kat5	79	58.025	Xenopus_tropicalis
ENSODEG00000016524	-	93	68.490	ENSXMAG00000005173	kat5b	77	68.490	Xiphophorus_maculatus