EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016548 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 817 bases
Position: chrJH651525.1:7356663-7357479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022548	Ribosomal_L7Ae	PF01248.26	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022809	-	765	-	ENSODEP00000022548	254 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016548	-	53	85.616	ENSODEG00000004646	-	86	85.616
ENSODEG00000016548	-	100	86.842	ENSODEG00000020390	-	100	86.842
ENSODEG00000016548	-	94	89.243	ENSODEG00000018579	-	99	89.474
ENSODEG00000016548	-	94	89.243	ENSODEG00000016465	-	100	89.474
ENSODEG00000016548	-	94	88.492	ENSODEG00000019962	-	96	88.235
ENSODEG00000016548	-	79	74.528	ENSODEG00000017921	-	80	74.528
ENSODEG00000016548	-	79	79.703	ENSODEG00000001246	-	99	79.703
ENSODEG00000016548	-	94	86.853	ENSODEG00000019669	-	100	87.218
ENSODEG00000016548	-	94	89.641	ENSODEG00000019092	-	100	89.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016548	-	77	90.256	ENSCJAG00000038736	-	92	90.476	Callithrix_jacchus
ENSODEG00000016548	-	93	83.936	ENSCATG00000022118	-	87	84.586	Cercocebus_atys
ENSODEG00000016548	-	94	80.400	ENSCATG00000044430	-	100	80.827	Cercocebus_atys
ENSODEG00000016548	-	97	77.220	ENSCLAG00000015729	-	98	76.863	Chinchilla_lanigera
ENSODEG00000016548	-	94	85.259	ENSCSAG00000018935	-	100	85.714	Chlorocebus_sabaeus
ENSODEG00000016548	-	52	81.818	ENSCANG00000031224	-	88	81.818	Colobus_angolensis_palliatus
ENSODEG00000016548	-	53	81.633	ENSCANG00000040570	-	97	81.633	Colobus_angolensis_palliatus
ENSODEG00000016548	-	79	78.873	ENSCGRG00001001223	-	99	78.873	Cricetulus_griseus_chok1gshd
ENSODEG00000016548	-	74	78.109	ENSCGRG00000001937	-	84	78.109	Cricetulus_griseus_crigri
ENSODEG00000016548	-	91	87.243	ENSMFAG00000025685	-	100	87.243	Macaca_fascicularis
ENSODEG00000016548	-	93	83.936	ENSMMUG00000030563	-	87	84.586	Macaca_mulatta
ENSODEG00000016548	-	94	86.853	ENSMLEG00000011286	-	100	87.218	Mandrillus_leucophaeus
ENSODEG00000016548	-	100	74.016	ENSMAUG00000003690	-	87	74.016	Mesocricetus_auratus
ENSODEG00000016548	-	99	77.075	ENSMICG00000009951	-	99	77.075	Microcebus_murinus
ENSODEG00000016548	-	94	60.714	ENSMPUG00000008565	-	96	61.328	Mustela_putorius_furo
ENSODEG00000016548	-	72	80.102	ENSNLEG00000033641	-	93	80.102	Nomascus_leucogenys
ENSODEG00000016548	-	90	63.071	ENSOGAG00000001957	-	98	63.071	Otolemur_garnettii
ENSODEG00000016548	-	55	62.500	ENSPPRG00000012899	-	100	62.500	Panthera_pardus
ENSODEG00000016548	-	92	68.085	ENSPPRG00000007296	-	91	68.085	Panthera_pardus
ENSODEG00000016548	-	91	80.579	ENSPTRG00000049514	-	100	80.579	Pan_troglodytes
ENSODEG00000016548	-	100	69.776	ENSPTRG00000043198	-	100	69.776	Pan_troglodytes
ENSODEG00000016548	-	98	83.206	ENSPANG00000020657	-	97	83.137	Papio_anubis
ENSODEG00000016548	-	54	69.799	ENSPPYG00000000945	-	99	69.799	Pongo_abelii
ENSODEG00000016548	-	59	94.000	ENSPCAG00000002848	-	58	93.506	Procavia_capensis
ENSODEG00000016548	-	53	73.288	ENSPCOG00000022818	-	100	73.288	Propithecus_coquereli
ENSODEG00000016548	-	100	80.150	ENSRNOG00000029706	AABR07029262.1	100	80.150	Rattus_norvegicus
ENSODEG00000016548	-	94	85.600	ENSRBIG00000004009	-	95	86.038	Rhinopithecus_bieti
ENSODEG00000016548	-	96	86.066	ENSSBOG00000028764	-	96	86.066	Saimiri_boliviensis_boliviensis
ENSODEG00000016548	-	53	69.565	ENSSFOG00015010146	-	94	69.565	Scleropages_formosus
ENSODEG00000016548	-	53	71.918	ENSVVUG00000029376	-	99	71.918	Vulpes_vulpes