EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016588 (Gene tree)
Gene ID: 101562953
Gene Symbol: ERCC6L2
Alias: -
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 104344 bases
Position: chrJH651699.1:3135653-3239996
Accession: 101562953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022601	ResIII	PF04851.15	3e-11	1	1
ENSODEP00000022602	ResIII	PF04851.15	2.1e-09	1	1
ENSODEP00000022601	DEAD	PF00270.29	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022862	ERCC6L2-201	2204	XM_012517485	ENSODEP00000022601	701 (aa)	XP_012372939	UPI00062A9F51
ENSODET00000022863	ERCC6L2-202	1317	-	ENSODEP00000022602	438 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016588	ERCC6L2	81	30.288	ENSODEG00000008519	RAD54L	71	30.508
ENSODEG00000016588	ERCC6L2	89	30.075	ENSODEG00000019564	-	59	32.492
ENSODEG00000016588	ERCC6L2	89	30.250	ENSODEG00000002650	-	76	32.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016588	ERCC6L2	98	92.308	ENSG00000182150	ERCC6L2	100	96.341	Homo_sapiens
ENSODEG00000016588	ERCC6L2	98	90.210	ENSAMEG00000011657	ERCC6L2	98	88.686	Ailuropoda_melanoleuca
ENSODEG00000016588	ERCC6L2	97	78.169	ENSAPLG00000006105	ERCC6L2	98	76.686	Anas_platyrhynchos
ENSODEG00000016588	ERCC6L2	98	77.570	ENSACAG00000012947	ERCC6L2	100	76.642	Anolis_carolinensis
ENSODEG00000016588	ERCC6L2	98	63.403	ENSACLG00000015088	ercc6l2	66	61.357	Astatotilapia_calliptera
ENSODEG00000016588	ERCC6L2	98	91.822	ENSCJAG00000008862	ERCC6L2	98	89.016	Callithrix_jacchus
ENSODEG00000016588	ERCC6L2	98	90.676	ENSCAFG00000001219	ERCC6L2	70	88.445	Canis_familiaris
ENSODEG00000016588	ERCC6L2	98	90.421	ENSTSYG00000013871	ERCC6L2	98	89.398	Carlito_syrichta
ENSODEG00000016588	ERCC6L2	97	86.885	ENSCAPG00000009212	ERCC6L2	100	86.885	Cavia_aperea
ENSODEG00000016588	ERCC6L2	99	93.438	ENSCPOG00000004544	-	90	94.860	Cavia_porcellus
ENSODEG00000016588	ERCC6L2	98	91.608	ENSCCAG00000026980	ERCC6L2	98	89.459	Cebus_capucinus
ENSODEG00000016588	ERCC6L2	100	76.605	ENSCHOG00000006282	ERCC6L2	98	76.605	Choloepus_hoffmanni
ENSODEG00000016588	ERCC6L2	98	91.608	ENSCANG00000039934	ERCC6L2	98	89.031	Colobus_angolensis_palliatus
ENSODEG00000016588	ERCC6L2	98	88.318	ENSCGRG00001022738	Ercc6l2	99	86.963	Cricetulus_griseus_chok1gshd
ENSODEG00000016588	ERCC6L2	98	88.318	ENSCGRG00000015854	Ercc6l2	66	90.182	Cricetulus_griseus_crigri
ENSODEG00000016588	ERCC6L2	97	89.437	ENSDORG00000010788	Ercc6l2	93	89.437	Dipodomys_ordii
ENSODEG00000016588	ERCC6L2	98	87.674	ENSETEG00000010686	ERCC6L2	100	83.404	Echinops_telfairi
ENSODEG00000016588	ERCC6L2	100	70.655	ENSEEUG00000009341	ERCC6L2	99	70.655	Erinaceus_europaeus
ENSODEG00000016588	ERCC6L2	98	79.206	ENSFALG00000003400	ERCC6L2	63	77.226	Ficedula_albicollis
ENSODEG00000016588	ERCC6L2	98	94.872	ENSFDAG00000000805	ERCC6L2	99	92.693	Fukomys_damarensis
ENSODEG00000016588	ERCC6L2	98	64.103	ENSGMOG00000007751	ercc6l2	61	65.794	Gadus_morhua
ENSODEG00000016588	ERCC6L2	98	64.802	ENSGACG00000006992	ercc6l2	56	67.423	Gasterosteus_aculeatus
ENSODEG00000016588	ERCC6L2	98	92.308	ENSGGOG00000002705	ERCC6L2	98	88.746	Gorilla_gorilla
ENSODEG00000016588	ERCC6L2	78	97.740	ENSHGLG00000009488	ERCC6L2	93	97.238	Heterocephalus_glaber_female
ENSODEG00000016588	ERCC6L2	100	86.040	ENSJJAG00000018150	Ercc6l2	100	86.040	Jaculus_jaculus
ENSODEG00000016588	ERCC6L2	98	89.277	ENSLAFG00000013092	ERCC6L2	99	86.305	Loxodonta_africana
ENSODEG00000016588	ERCC6L2	98	92.308	ENSMNEG00000035630	ERCC6L2	98	89.316	Macaca_nemestrina
ENSODEG00000016588	ERCC6L2	98	92.308	ENSMLEG00000019530	ERCC6L2	98	89.459	Mandrillus_leucophaeus
ENSODEG00000016588	ERCC6L2	98	88.084	ENSMAUG00000004820	-	66	90.000	Mesocricetus_auratus
ENSODEG00000016588	ERCC6L2	100	90.028	ENSMICG00000029160	ERCC6L2	98	90.028	Microcebus_murinus
ENSODEG00000016588	ERCC6L2	98	87.850	ENSMOCG00000019362	-	91	88.263	Microtus_ochrogaster
ENSODEG00000016588	ERCC6L2	98	61.628	ENSMMOG00000001419	ercc6l2	59	60.832	Mola_mola
ENSODEG00000016588	ERCC6L2	98	66.667	ENSMALG00000016933	ercc6l2	61	66.719	Monopterus_albus
ENSODEG00000016588	ERCC6L2	98	89.252	MGP_CAROLIEiJ_G0018635	-	99	87.848	Mus_caroli
ENSODEG00000016588	ERCC6L2	98	89.486	ENSMUSG00000021470	Ercc6l2	99	87.088	Mus_musculus
ENSODEG00000016588	ERCC6L2	98	89.720	MGP_PahariEiJ_G0019699	-	99	88.580	Mus_pahari
ENSODEG00000016588	ERCC6L2	98	89.720	MGP_SPRETEiJ_G0019515	-	99	88.141	Mus_spretus
ENSODEG00000016588	ERCC6L2	98	90.421	ENSMPUG00000006738	ERCC6L2	68	88.785	Mustela_putorius_furo
ENSODEG00000016588	ERCC6L2	100	86.344	ENSMLUG00000000845	ERCC6L2	98	86.344	Myotis_lucifugus
ENSODEG00000016588	ERCC6L2	98	89.953	ENSNGAG00000016174	Ercc6l2	99	88.539	Nannospalax_galili
ENSODEG00000016588	ERCC6L2	98	92.308	ENSNLEG00000016784	ERCC6L2	98	89.031	Nomascus_leucogenys
ENSODEG00000016588	ERCC6L2	97	87.354	ENSOPRG00000011647	ERCC6L2	100	87.299	Ochotona_princeps
ENSODEG00000016588	ERCC6L2	98	62.937	ENSONIG00000015139	ercc6l2	98	60.807	Oreochromis_niloticus
ENSODEG00000016588	ERCC6L2	98	90.909	ENSOCUG00000000442	-	98	90.102	Oryctolagus_cuniculus
ENSODEG00000016588	ERCC6L2	98	65.035	ENSORLG00000004287	ercc6l2	58	67.099	Oryzias_latipes
ENSODEG00000016588	ERCC6L2	98	64.569	ENSORLG00015010250	ercc6l2	58	66.937	Oryzias_latipes_hsok
ENSODEG00000016588	ERCC6L2	98	91.608	ENSOGAG00000003146	ERCC6L2	66	91.489	Otolemur_garnettii
ENSODEG00000016588	ERCC6L2	98	91.589	ENSOARG00000008546	ERCC6L2	70	89.511	Ovis_aries
ENSODEG00000016588	ERCC6L2	98	92.541	ENSPPAG00000035061	ERCC6L2	98	89.031	Pan_paniscus
ENSODEG00000016588	ERCC6L2	98	90.421	ENSPPRG00000019238	ERCC6L2	98	89.255	Panthera_pardus
ENSODEG00000016588	ERCC6L2	98	89.953	ENSPTIG00000009148	ERCC6L2	98	88.682	Panthera_tigris_altaica
ENSODEG00000016588	ERCC6L2	98	92.308	ENSPTRG00000048689	ERCC6L2	98	88.889	Pan_troglodytes
ENSODEG00000016588	ERCC6L2	98	81.776	ENSPSIG00000010627	ERCC6L2	100	79.562	Pelodiscus_sinensis
ENSODEG00000016588	ERCC6L2	98	89.953	ENSPEMG00000006631	-	66	91.636	Peromyscus_maniculatus_bairdii
ENSODEG00000016588	ERCC6L2	98	84.884	ENSPCIG00000020095	-	59	82.040	Phascolarctos_cinereus
ENSODEG00000016588	ERCC6L2	100	85.735	ENSPCOG00000026714	ERCC6L2	98	85.735	Propithecus_coquereli
ENSODEG00000016588	ERCC6L2	98	88.811	ENSPVAG00000003926	ERCC6L2	98	81.232	Pteropus_vampyrus
ENSODEG00000016588	ERCC6L2	98	63.403	ENSPNYG00000015347	ercc6l2	63	61.391	Pundamilia_nyererei
ENSODEG00000016588	ERCC6L2	100	86.020	ENSRBIG00000018434	ERCC6L2	98	86.020	Rhinopithecus_bieti
ENSODEG00000016588	ERCC6L2	98	92.075	ENSRROG00000029000	ERCC6L2	98	89.316	Rhinopithecus_roxellana
ENSODEG00000016588	ERCC6L2	88	81.654	ENSSHAG00000000781	-	100	81.654	Sarcophilus_harrisii
ENSODEG00000016588	ERCC6L2	98	64.569	ENSSLDG00000018663	ercc6l2	56	67.047	Seriola_lalandi_dorsalis
ENSODEG00000016588	ERCC6L2	98	77.336	ENSSPUG00000004336	ERCC6L2	54	74.474	Sphenodon_punctatus
ENSODEG00000016588	ERCC6L2	98	61.449	ENSSPAG00000004484	ercc6l2	60	60.000	Stegastes_partitus
ENSODEG00000016588	ERCC6L2	98	79.206	ENSTGUG00000000524	ERCC6L2	100	77.193	Taeniopygia_guttata
ENSODEG00000016588	ERCC6L2	98	62.471	ENSTRUG00000014634	ercc6l2	65	60.663	Takifugu_rubripes
ENSODEG00000016588	ERCC6L2	88	89.378	ENSTBEG00000014213	ERCC6L2	87	94.231	Tupaia_belangeri
ENSODEG00000016588	ERCC6L2	99	83.811	ENSTTRG00000005372	ERCC6L2	98	83.811	Tursiops_truncatus
ENSODEG00000016588	ERCC6L2	98	92.541	ENSVPAG00000004701	ERCC6L2	99	91.297	Vicugna_pacos
ENSODEG00000016588	ERCC6L2	98	73.427	ENSXETG00000014835	ercc6l2	63	71.723	Xenopus_tropicalis