EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000016644 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 107041 bases
Position: chrJH651607.1:8844699-8951739
Accession: 101579725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022675	RRM_1	PF00076.22	5.8e-33	1	3
ENSODEP00000022675	RRM_1	PF00076.22	5.8e-33	2	3
ENSODEP00000022675	RRM_1	PF00076.22	5.8e-33	3	3
ENSODEP00000022674	RRM_1	PF00076.22	5.8e-33	1	3
ENSODEP00000022674	RRM_1	PF00076.22	5.8e-33	2	3
ENSODEP00000022674	RRM_1	PF00076.22	5.8e-33	3	3
ENSODEP00000022673	RRM_1	PF00076.22	5.9e-33	1	3
ENSODEP00000022673	RRM_1	PF00076.22	5.9e-33	2	3
ENSODEP00000022673	RRM_1	PF00076.22	5.9e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000022934	SPEN-201	10500	-	ENSODEP00000022673	3499 (aa)	-	-
ENSODET00000022935	SPEN-202	10446	XM_004637769	ENSODEP00000022674	3481 (aa)	XP_004637826	-
ENSODET00000022936	SPEN-203	10440	-	ENSODEP00000022675	3479 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016644's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016644	SPEN	100	80.612	ENSG00000065526	SPEN	100	80.785	Homo_sapiens
ENSODEG00000016644	SPEN	84	84.024	ENSAPOG00000011411	si:ch1073-335m2.2	89	73.558	Acanthochromis_polyacanthus
ENSODEG00000016644	SPEN	100	79.563	ENSAMEG00000011817	SPEN	100	80.287	Ailuropoda_melanoleuca
ENSODEG00000016644	SPEN	90	81.461	ENSAOCG00000014505	-	100	43.161	Amphiprion_ocellaris
ENSODEG00000016644	SPEN	90	81.461	ENSAPEG00000010288	-	100	42.985	Amphiprion_percula
ENSODEG00000016644	SPEN	67	78.947	ENSAPEG00000013515	si:ch1073-335m2.2	62	78.947	Amphiprion_percula
ENSODEG00000016644	SPEN	77	79.235	ENSATEG00000007674	si:ch1073-335m2.2	71	79.235	Anabas_testudineus
ENSODEG00000016644	SPEN	95	82.584	ENSATEG00000005627	-	95	46.992	Anabas_testudineus
ENSODEG00000016644	SPEN	99	66.187	ENSAPLG00000012618	SPEN	100	66.345	Anas_platyrhynchos
ENSODEG00000016644	SPEN	99	58.591	ENSACAG00000013761	SPEN	100	58.785	Anolis_carolinensis
ENSODEG00000016644	SPEN	69	77.041	ENSACLG00000021433	si:ch1073-335m2.2	73	77.041	Astatotilapia_calliptera
ENSODEG00000016644	SPEN	100	42.786	ENSACLG00000016922	-	100	42.823	Astatotilapia_calliptera
ENSODEG00000016644	SPEN	91	83.240	ENSAMXG00000012485	spen	100	44.839	Astyanax_mexicanus
ENSODEG00000016644	SPEN	100	80.865	ENSBTAG00000018729	SPEN	100	80.882	Bos_taurus
ENSODEG00000016644	SPEN	100	77.092	ENSCJAG00000008527	SPEN	100	90.215	Callithrix_jacchus
ENSODEG00000016644	SPEN	87	78.442	ENSCAFG00000016132	-	96	86.997	Canis_familiaris
ENSODEG00000016644	SPEN	100	81.342	ENSCHIG00000025070	SPEN	100	81.205	Capra_hircus
ENSODEG00000016644	SPEN	92	79.128	ENSTSYG00000036016	SPEN	99	79.126	Carlito_syrichta
ENSODEG00000016644	SPEN	99	88.741	ENSCAPG00000013803	SPEN	100	88.713	Cavia_aperea
ENSODEG00000016644	SPEN	99	86.357	ENSCPOG00000014036	SPEN	100	86.526	Cavia_porcellus
ENSODEG00000016644	SPEN	100	76.450	ENSCCAG00000020258	SPEN	100	76.259	Cebus_capucinus
ENSODEG00000016644	SPEN	96	100.000	ENSCATG00000015079	SPEN	99	99.265	Cercocebus_atys
ENSODEG00000016644	SPEN	99	88.076	ENSCLAG00000002018	SPEN	100	88.503	Chinchilla_lanigera
ENSODEG00000016644	SPEN	100	67.162	ENSCPBG00000010477	SPEN	100	67.236	Chrysemys_picta_bellii
ENSODEG00000016644	SPEN	99	79.532	ENSCANG00000034547	SPEN	99	79.423	Colobus_angolensis_palliatus
ENSODEG00000016644	SPEN	99	77.879	ENSCGRG00001007725	Spen	100	78.017	Cricetulus_griseus_chok1gshd
ENSODEG00000016644	SPEN	99	76.944	ENSCGRG00000010581	Spen	100	76.917	Cricetulus_griseus_crigri
ENSODEG00000016644	SPEN	99	84.270	ENSCSEG00000003915	-	95	48.766	Cynoglossus_semilaevis
ENSODEG00000016644	SPEN	100	42.384	ENSCVAG00000016346	-	94	46.157	Cyprinodon_variegatus
ENSODEG00000016644	SPEN	88	61.172	ENSCVAG00000009075	si:ch1073-335m2.2	92	61.172	Cyprinodon_variegatus
ENSODEG00000016644	SPEN	94	47.762	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSODEG00000016644	SPEN	99	77.681	ENSDORG00000023909	Spen	100	77.496	Dipodomys_ordii
ENSODEG00000016644	SPEN	69	95.816	ENSETEG00000016692	-	66	95.816	Echinops_telfairi
ENSODEG00000016644	SPEN	95	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSODEG00000016644	SPEN	95	100.000	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSODEG00000016644	SPEN	74	97.674	ENSEEUG00000010255	SPEN	74	97.674	Erinaceus_europaeus
ENSODEG00000016644	SPEN	92	83.432	ENSELUG00000007726	si:ch1073-335m2.2	84	83.432	Esox_lucius
ENSODEG00000016644	SPEN	88	62.554	ENSFALG00000003551	SPEN	100	62.659	Ficedula_albicollis
ENSODEG00000016644	SPEN	99	83.315	ENSFDAG00000010212	SPEN	100	82.694	Fukomys_damarensis
ENSODEG00000016644	SPEN	93	71.981	ENSFHEG00000004544	si:ch1073-335m2.2	64	72.464	Fundulus_heteroclitus
ENSODEG00000016644	SPEN	66	79.661	ENSGMOG00000008156	si:ch1073-335m2.2	52	79.661	Gadus_morhua
ENSODEG00000016644	SPEN	96	79.888	ENSGMOG00000008397	-	80	79.888	Gadus_morhua
ENSODEG00000016644	SPEN	100	66.538	ENSGALG00000036932	SPEN	99	66.685	Gallus_gallus
ENSODEG00000016644	SPEN	100	42.966	ENSGAFG00000015819	-	90	74.906	Gambusia_affinis
ENSODEG00000016644	SPEN	58	60.206	ENSGAFG00000021570	si:ch1073-335m2.2	94	59.630	Gambusia_affinis
ENSODEG00000016644	SPEN	63	83.333	ENSGACG00000001176	si:ch1073-335m2.2	66	80.838	Gasterosteus_aculeatus
ENSODEG00000016644	SPEN	100	44.005	ENSGACG00000005341	-	100	43.842	Gasterosteus_aculeatus
ENSODEG00000016644	SPEN	99	89.258	ENSGAGG00000020785	SPEN	100	67.722	Gopherus_agassizii
ENSODEG00000016644	SPEN	68	84.615	ENSHBUG00000023253	si:ch1073-335m2.2	82	84.615	Haplochromis_burtoni
ENSODEG00000016644	SPEN	100	42.771	ENSHBUG00000020626	-	100	42.801	Haplochromis_burtoni
ENSODEG00000016644	SPEN	100	81.219	ENSHGLG00000019259	SPEN	100	81.212	Heterocephalus_glaber_female
ENSODEG00000016644	SPEN	88	86.154	ENSHGLG00100019294	SPEN	95	86.154	Heterocephalus_glaber_male
ENSODEG00000016644	SPEN	66	61.616	ENSHCOG00000006004	si:ch1073-335m2.2	71	61.616	Hippocampus_comes
ENSODEG00000016644	SPEN	81	66.507	ENSIPUG00000018212	si:ch1073-335m2.2	95	66.507	Ictalurus_punctatus
ENSODEG00000016644	SPEN	99	81.808	ENSSTOG00000021428	SPEN	100	82.312	Ictidomys_tridecemlineatus
ENSODEG00000016644	SPEN	100	80.214	ENSJJAG00000010882	Spen	100	80.232	Jaculus_jaculus
ENSODEG00000016644	SPEN	88	72.906	ENSKMAG00000021725	si:ch1073-335m2.2	74	82.840	Kryptolebias_marmoratus
ENSODEG00000016644	SPEN	94	45.892	ENSKMAG00000003882	-	94	46.333	Kryptolebias_marmoratus
ENSODEG00000016644	SPEN	79	79.882	ENSLBEG00000020855	si:ch1073-335m2.2	51	79.882	Labrus_bergylta
ENSODEG00000016644	SPEN	98	79.412	ENSLACG00000003258	SPEN	100	79.412	Latimeria_chalumnae
ENSODEG00000016644	SPEN	100	50.786	ENSLOCG00000007896	si:ch1073-335m2.2	100	51.298	Lepisosteus_oculatus
ENSODEG00000016644	SPEN	99	79.123	ENSLAFG00000004524	SPEN	99	84.517	Loxodonta_africana
ENSODEG00000016644	SPEN	100	80.986	ENSMMUG00000008026	SPEN	100	81.311	Macaca_mulatta
ENSODEG00000016644	SPEN	100	80.649	ENSMLEG00000039293	SPEN	99	80.811	Mandrillus_leucophaeus
ENSODEG00000016644	SPEN	69	74.000	ENSMAMG00000023870	si:ch1073-335m2.2	63	74.000	Mastacembelus_armatus
ENSODEG00000016644	SPEN	90	40.304	ENSMZEG00005021491	-	99	40.294	Maylandia_zebra
ENSODEG00000016644	SPEN	69	77.041	ENSMZEG00005011762	si:ch1073-335m2.2	73	77.041	Maylandia_zebra
ENSODEG00000016644	SPEN	100	66.474	ENSMODG00000003411	SPEN	100	66.309	Monodelphis_domestica
ENSODEG00000016644	SPEN	97	82.022	ENSMALG00000008625	-	96	46.054	Monopterus_albus
ENSODEG00000016644	SPEN	100	76.788	MGP_CAROLIEiJ_G0026745	Spen	100	77.283	Mus_caroli
ENSODEG00000016644	SPEN	100	76.805	ENSMUSG00000040761	Spen	100	77.271	Mus_musculus
ENSODEG00000016644	SPEN	100	75.518	MGP_PahariEiJ_G0029076	Spen	100	76.380	Mus_pahari
ENSODEG00000016644	SPEN	100	77.024	MGP_SPRETEiJ_G0027724	Spen	100	77.464	Mus_spretus
ENSODEG00000016644	SPEN	98	78.804	ENSMPUG00000016317	SPEN	100	83.141	Mustela_putorius_furo
ENSODEG00000016644	SPEN	100	82.892	ENSNGAG00000000641	Spen	100	82.892	Nannospalax_galili
ENSODEG00000016644	SPEN	86	39.097	ENSNBRG00000022090	-	100	39.019	Neolamprologus_brichardi
ENSODEG00000016644	SPEN	78	77.041	ENSNBRG00000005733	si:ch1073-335m2.2	85	77.041	Neolamprologus_brichardi
ENSODEG00000016644	SPEN	99	80.158	ENSNLEG00000007652	SPEN	99	81.088	Nomascus_leucogenys
ENSODEG00000016644	SPEN	90	93.750	ENSMEUG00000002422	SPEN	91	93.750	Notamacropus_eugenii
ENSODEG00000016644	SPEN	92	82.461	ENSOPRG00000015800	SPEN	93	82.461	Ochotona_princeps
ENSODEG00000016644	SPEN	100	44.296	ENSONIG00000006573	-	99	74.047	Oreochromis_niloticus
ENSODEG00000016644	SPEN	58	76.650	ENSORLG00000028894	-	68	76.650	Oryzias_latipes
ENSODEG00000016644	SPEN	79	76.650	ENSORLG00020007735	-	92	76.650	Oryzias_latipes_hni
ENSODEG00000016644	SPEN	87	76.650	ENSORLG00015022085	-	77	76.650	Oryzias_latipes_hsok
ENSODEG00000016644	SPEN	80	65.639	ENSOMEG00000004509	si:ch1073-335m2.2	65	67.105	Oryzias_melastigma
ENSODEG00000016644	SPEN	71	83.333	ENSOMEG00000007639	-	51	83.333	Oryzias_melastigma
ENSODEG00000016644	SPEN	99	80.393	ENSOARG00000008477	SPEN	99	80.229	Ovis_aries
ENSODEG00000016644	SPEN	99	80.409	ENSPPAG00000035690	SPEN	100	81.327	Pan_paniscus
ENSODEG00000016644	SPEN	100	81.378	ENSPTRG00000000210	SPEN	100	81.442	Pan_troglodytes
ENSODEG00000016644	SPEN	100	79.984	ENSPANG00000006293	SPEN	100	80.092	Papio_anubis
ENSODEG00000016644	SPEN	92	83.889	ENSPKIG00000002617	SPEN	91	83.889	Paramormyrops_kingsleyae
ENSODEG00000016644	SPEN	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSODEG00000016644	SPEN	99	65.871	ENSPSIG00000008026	SPEN	100	65.769	Pelodiscus_sinensis
ENSODEG00000016644	SPEN	99	78.227	ENSPEMG00000022997	Spen	100	78.366	Peromyscus_maniculatus_bairdii
ENSODEG00000016644	SPEN	68	74.627	ENSPFOG00000017986	si:ch1073-335m2.2	82	74.627	Poecilia_formosa
ENSODEG00000016644	SPEN	53	74.627	ENSPLAG00000016625	si:ch1073-335m2.2	82	74.627	Poecilia_latipinna
ENSODEG00000016644	SPEN	100	42.540	ENSPMEG00000006764	-	90	74.060	Poecilia_mexicana
ENSODEG00000016644	SPEN	60	74.627	ENSPMEG00000002674	si:ch1073-335m2.2	77	74.627	Poecilia_mexicana
ENSODEG00000016644	SPEN	100	42.748	ENSPREG00000010399	-	90	74.436	Poecilia_reticulata
ENSODEG00000016644	SPEN	62	59.707	ENSPREG00000005357	si:ch1073-335m2.2	67	59.707	Poecilia_reticulata
ENSODEG00000016644	SPEN	100	80.845	ENSPPYG00000001834	SPEN	100	80.899	Pongo_abelii
ENSODEG00000016644	SPEN	100	80.609	ENSPCOG00000021735	SPEN	100	80.299	Propithecus_coquereli
ENSODEG00000016644	SPEN	83	87.925	ENSPVAG00000013794	SPEN	84	87.997	Pteropus_vampyrus
ENSODEG00000016644	SPEN	100	42.902	ENSPNYG00000012379	-	100	42.861	Pundamilia_nyererei
ENSODEG00000016644	SPEN	77	77.041	ENSPNYG00000009042	si:ch1073-335m2.2	75	77.041	Pundamilia_nyererei
ENSODEG00000016644	SPEN	80	78.409	ENSPNAG00000011452	si:ch1073-335m2.2	84	78.409	Pygocentrus_nattereri
ENSODEG00000016644	SPEN	99	84.181	ENSPNAG00000020795	spen	86	77.903	Pygocentrus_nattereri
ENSODEG00000016644	SPEN	99	66.815	ENSSHAG00000004960	SPEN	99	85.038	Sarcophilus_harrisii
ENSODEG00000016644	SPEN	90	82.632	ENSSFOG00015010267	si:ch1073-335m2.2	93	51.835	Scleropages_formosus
ENSODEG00000016644	SPEN	88	45.016	ENSSFOG00015007131	si:ch1073-335m2.2	100	44.620	Scleropages_formosus
ENSODEG00000016644	SPEN	95	82.022	ENSSMAG00000008996	-	100	43.197	Scophthalmus_maximus
ENSODEG00000016644	SPEN	93	74.627	ENSSDUG00000008416	si:ch1073-335m2.2	73	74.627	Seriola_dumerili
ENSODEG00000016644	SPEN	99	82.584	ENSSDUG00000003476	-	90	75.940	Seriola_dumerili
ENSODEG00000016644	SPEN	99	82.584	ENSSLDG00000012950	-	90	75.940	Seriola_lalandi_dorsalis
ENSODEG00000016644	SPEN	65	74.129	ENSSLDG00000023347	si:ch1073-335m2.2	70	74.129	Seriola_lalandi_dorsalis
ENSODEG00000016644	SPEN	88	62.163	ENSSPUG00000001866	-	100	62.039	Sphenodon_punctatus
ENSODEG00000016644	SPEN	85	83.432	ENSSPAG00000012454	si:ch1073-335m2.2	91	83.432	Stegastes_partitus
ENSODEG00000016644	SPEN	99	81.461	ENSSPAG00000006014	-	90	75.564	Stegastes_partitus
ENSODEG00000016644	SPEN	94	80.337	ENSTRUG00000024350	-	94	46.049	Takifugu_rubripes
ENSODEG00000016644	SPEN	62	82.840	ENSTRUG00000021008	si:ch1073-335m2.2	72	82.840	Takifugu_rubripes
ENSODEG00000016644	SPEN	92	82.840	ENSTNIG00000014666	si:ch1073-335m2.2	62	82.840	Tetraodon_nigroviridis
ENSODEG00000016644	SPEN	96	70.284	ENSTNIG00000010907	-	95	71.517	Tetraodon_nigroviridis
ENSODEG00000016644	SPEN	74	98.658	ENSTBEG00000003628	SPEN	76	98.658	Tupaia_belangeri
ENSODEG00000016644	SPEN	81	94.051	ENSTTRG00000015704	SPEN	79	94.051	Tursiops_truncatus
ENSODEG00000016644	SPEN	100	79.698	ENSUAMG00000009600	SPEN	100	80.395	Ursus_americanus
ENSODEG00000016644	SPEN	100	78.337	ENSUMAG00000021641	SPEN	99	82.995	Ursus_maritimus
ENSODEG00000016644	SPEN	96	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSODEG00000016644	SPEN	100	54.109	ENSXETG00000023114	SPEN	100	53.681	Xenopus_tropicalis
ENSODEG00000016644	SPEN	91	58.633	ENSXCOG00000004516	si:ch1073-335m2.2	97	58.633	Xiphophorus_couchianus
ENSODEG00000016644	SPEN	100	42.512	ENSXMAG00000021384	-	90	72.556	Xiphophorus_maculatus
ENSODEG00000016644	SPEN	95	59.058	ENSXMAG00000029887	si:ch1073-335m2.2	99	59.058	Xiphophorus_maculatus