EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016737 (Gene tree)
Gene ID: 101564264
Gene Symbol: -
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 89816 bases
Position: chrJH651533.1:15550953-15640768
Accession: 101564264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022808	Suf	PF05843.14	2.6e-84	1	1
ENSODEP00000022809	Suf	PF05843.14	5.4e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023072	-	2154	XM_004627064	ENSODEP00000022808	717 (aa)	XP_004627121	UPI00033392FE
ENSODET00000023073	-	2109	-	ENSODEP00000022809	702 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016737	-	99	81.805	ENSODEG00000006311	-	97	87.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016737	-	100	99.721	ENSG00000176102	CSTF3	100	99.721	Homo_sapiens
ENSODEG00000016737	-	100	91.365	ENSAPOG00000014054	cstf3	100	91.365	Acanthochromis_polyacanthus
ENSODEG00000016737	-	99	99.718	ENSAMEG00000007187	CSTF3	98	99.718	Ailuropoda_melanoleuca
ENSODEG00000016737	-	89	86.240	ENSACIG00000005539	cstf3	100	86.240	Amphilophus_citrinellus
ENSODEG00000016737	-	100	91.086	ENSAOCG00000010930	cstf3	100	91.086	Amphiprion_ocellaris
ENSODEG00000016737	-	100	91.086	ENSAPEG00000007903	cstf3	100	91.086	Amphiprion_percula
ENSODEG00000016737	-	100	91.226	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSODEG00000016737	-	99	98.023	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSODEG00000016737	-	100	95.682	ENSACAG00000002823	CSTF3	100	95.682	Anolis_carolinensis
ENSODEG00000016737	-	100	99.721	ENSANAG00000020699	CSTF3	100	99.840	Aotus_nancymaae
ENSODEG00000016737	-	99	91.261	ENSACLG00000007820	cstf3	100	91.365	Astatotilapia_calliptera
ENSODEG00000016737	-	100	90.669	ENSAMXG00000014198	cstf3	100	90.947	Astyanax_mexicanus
ENSODEG00000016737	-	100	99.721	ENSBTAG00000008617	CSTF3	100	99.852	Bos_taurus
ENSODEG00000016737	-	98	48.626	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSODEG00000016737	-	100	99.721	ENSCJAG00000005533	CSTF3	100	99.840	Callithrix_jacchus
ENSODEG00000016737	-	100	99.582	ENSCAFG00000007264	CSTF3	100	99.582	Canis_familiaris
ENSODEG00000016737	-	100	99.858	ENSCAFG00020002715	CSTF3	99	99.859	Canis_lupus_dingo
ENSODEG00000016737	-	99	99.855	ENSCHIG00000016418	CSTF3	100	99.855	Capra_hircus
ENSODEG00000016737	-	99	99.718	ENSTSYG00000000451	CSTF3	100	99.718	Carlito_syrichta
ENSODEG00000016737	-	83	96.023	ENSCAPG00000010958	CSTF3	98	96.023	Cavia_aperea
ENSODEG00000016737	-	100	99.303	ENSCPOG00000005545	CSTF3	100	99.303	Cavia_porcellus
ENSODEG00000016737	-	100	99.721	ENSCCAG00000024790	CSTF3	100	99.840	Cebus_capucinus
ENSODEG00000016737	-	100	99.721	ENSCATG00000007080	CSTF3	100	99.840	Cercocebus_atys
ENSODEG00000016737	-	100	99.721	ENSCLAG00000016179	CSTF3	100	99.721	Chinchilla_lanigera
ENSODEG00000016737	-	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSODEG00000016737	-	100	97.354	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSODEG00000016737	-	99	62.098	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSODEG00000016737	-	99	60.948	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSODEG00000016737	-	100	99.721	ENSCANG00000035468	CSTF3	100	99.840	Colobus_angolensis_palliatus
ENSODEG00000016737	-	100	99.303	ENSCGRG00001014773	Cstf3	100	99.303	Cricetulus_griseus_chok1gshd
ENSODEG00000016737	-	100	99.303	ENSCGRG00000004142	Cstf3	100	99.303	Cricetulus_griseus_crigri
ENSODEG00000016737	-	100	91.353	ENSCSEG00000014283	cstf3	100	91.353	Cynoglossus_semilaevis
ENSODEG00000016737	-	100	90.251	ENSCVAG00000019739	cstf3	100	90.251	Cyprinodon_variegatus
ENSODEG00000016737	-	100	90.934	ENSDARG00000018904	cstf3	100	90.934	Danio_rerio
ENSODEG00000016737	-	99	99.436	ENSDNOG00000007366	CSTF3	99	99.436	Dasypus_novemcinctus
ENSODEG00000016737	-	99	91.961	ENSDORG00000005898	Cstf3	99	91.961	Dipodomys_ordii
ENSODEG00000016737	-	99	56.575	FBgn0003559	su(f)	98	57.123	Drosophila_melanogaster
ENSODEG00000016737	-	85	99.164	ENSETEG00000017097	CSTF3	90	94.081	Echinops_telfairi
ENSODEG00000016737	-	84	75.421	ENSEBUG00000015459	cstf3	96	75.421	Eptatretus_burgeri
ENSODEG00000016737	-	98	99.714	ENSEASG00005019884	CSTF3	100	99.714	Equus_asinus_asinus
ENSODEG00000016737	-	98	99.714	ENSECAG00000023338	CSTF3	100	99.714	Equus_caballus
ENSODEG00000016737	-	100	93.863	ENSEEUG00000015167	CSTF3	100	93.863	Erinaceus_europaeus
ENSODEG00000016737	-	100	89.958	ENSELUG00000023393	cstf3	100	89.958	Esox_lucius
ENSODEG00000016737	-	100	99.721	ENSFCAG00000030711	CSTF3	100	99.721	Felis_catus
ENSODEG00000016737	-	93	98.649	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSODEG00000016737	-	100	99.861	ENSFDAG00000012082	CSTF3	100	99.861	Fukomys_damarensis
ENSODEG00000016737	-	100	90.251	ENSFHEG00000020623	cstf3	100	90.251	Fundulus_heteroclitus
ENSODEG00000016737	-	100	89.291	ENSGMOG00000012275	cstf3	100	89.291	Gadus_morhua
ENSODEG00000016737	-	100	97.911	ENSGALG00000011685	CSTF3	100	97.911	Gallus_gallus
ENSODEG00000016737	-	100	90.669	ENSGAFG00000002181	cstf3	100	90.669	Gambusia_affinis
ENSODEG00000016737	-	99	91.139	ENSGACG00000015997	cstf3	99	91.139	Gasterosteus_aculeatus
ENSODEG00000016737	-	99	97.616	ENSGAGG00000006200	CSTF3	99	97.616	Gopherus_agassizii
ENSODEG00000016737	-	99	95.286	ENSGGOG00000026591	CSTF3	99	95.286	Gorilla_gorilla
ENSODEG00000016737	-	99	91.261	ENSHBUG00000016656	cstf3	100	91.365	Haplochromis_burtoni
ENSODEG00000016737	-	100	99.442	ENSHGLG00000017834	CSTF3	100	99.442	Heterocephalus_glaber_female
ENSODEG00000016737	-	100	99.442	ENSHGLG00100018042	CSTF3	100	99.442	Heterocephalus_glaber_male
ENSODEG00000016737	-	99	89.744	ENSHCOG00000015218	cstf3	100	88.858	Hippocampus_comes
ENSODEG00000016737	-	100	90.237	ENSIPUG00000013170	CSTF3	100	90.237	Ictalurus_punctatus
ENSODEG00000016737	-	100	99.721	ENSSTOG00000013306	CSTF3	100	99.721	Ictidomys_tridecemlineatus
ENSODEG00000016737	-	99	87.448	ENSJJAG00000018430	Cstf3	99	87.448	Jaculus_jaculus
ENSODEG00000016737	-	99	90.210	ENSKMAG00000010916	cstf3	99	90.210	Kryptolebias_marmoratus
ENSODEG00000016737	-	99	90.948	ENSLBEG00000002306	cstf3	99	90.948	Labrus_bergylta
ENSODEG00000016737	-	100	93.724	ENSLACG00000017296	CSTF3	100	93.724	Latimeria_chalumnae
ENSODEG00000016737	-	100	93.166	ENSLOCG00000004415	cstf3	100	93.166	Lepisosteus_oculatus
ENSODEG00000016737	-	100	99.582	ENSLAFG00000008712	CSTF3	100	99.582	Loxodonta_africana
ENSODEG00000016737	-	100	99.721	ENSMFAG00000029516	CSTF3	100	99.840	Macaca_fascicularis
ENSODEG00000016737	-	100	99.721	ENSMMUG00000002542	CSTF3	100	99.721	Macaca_mulatta
ENSODEG00000016737	-	100	99.721	ENSMNEG00000021807	CSTF3	100	99.840	Macaca_nemestrina
ENSODEG00000016737	-	100	99.721	ENSMLEG00000039594	CSTF3	100	99.840	Mandrillus_leucophaeus
ENSODEG00000016737	-	100	91.086	ENSMAMG00000020423	cstf3	100	91.086	Mastacembelus_armatus
ENSODEG00000016737	-	99	91.298	ENSMZEG00005012082	cstf3	100	91.365	Maylandia_zebra
ENSODEG00000016737	-	100	98.050	ENSMGAG00000001383	CSTF3	100	98.050	Meleagris_gallopavo
ENSODEG00000016737	-	100	99.163	ENSMAUG00000002487	Cstf3	100	99.163	Mesocricetus_auratus
ENSODEG00000016737	-	100	99.442	ENSMICG00000004784	CSTF3	100	99.520	Microcebus_murinus
ENSODEG00000016737	-	100	99.303	ENSMOCG00000017583	Cstf3	100	99.303	Microtus_ochrogaster
ENSODEG00000016737	-	99	91.268	ENSMMOG00000016026	cstf3	95	91.268	Mola_mola
ENSODEG00000016737	-	100	83.961	ENSMODG00000025205	-	100	83.961	Monodelphis_domestica
ENSODEG00000016737	-	100	98.466	ENSMODG00000009745	-	100	98.466	Monodelphis_domestica
ENSODEG00000016737	-	100	90.808	ENSMALG00000012050	cstf3	100	90.808	Monopterus_albus
ENSODEG00000016737	-	100	99.303	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.303	Mus_caroli
ENSODEG00000016737	-	100	99.303	ENSMUSG00000027176	Cstf3	100	99.303	Mus_musculus
ENSODEG00000016737	-	100	99.303	MGP_PahariEiJ_G0025464	Cstf3	100	99.303	Mus_pahari
ENSODEG00000016737	-	100	99.303	MGP_SPRETEiJ_G0024939	Cstf3	100	99.303	Mus_spretus
ENSODEG00000016737	-	100	99.442	ENSMPUG00000011457	CSTF3	100	99.442	Mustela_putorius_furo
ENSODEG00000016737	-	99	99.297	ENSMLUG00000003073	-	99	99.297	Myotis_lucifugus
ENSODEG00000016737	-	100	96.234	ENSMLUG00000026022	-	100	96.234	Myotis_lucifugus
ENSODEG00000016737	-	100	99.303	ENSNGAG00000010677	Cstf3	100	99.303	Nannospalax_galili
ENSODEG00000016737	-	89	91.200	ENSNBRG00000007345	cstf3	100	91.200	Neolamprologus_brichardi
ENSODEG00000016737	-	100	99.721	ENSNLEG00000017901	CSTF3	100	99.840	Nomascus_leucogenys
ENSODEG00000016737	-	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSODEG00000016737	-	67	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSODEG00000016737	-	98	91.915	ENSONIG00000005563	cstf3	100	91.365	Oreochromis_niloticus
ENSODEG00000016737	-	90	97.634	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSODEG00000016737	-	100	99.582	ENSOCUG00000015417	CSTF3	100	99.582	Oryctolagus_cuniculus
ENSODEG00000016737	-	100	90.656	ENSORLG00000009762	cstf3	100	90.656	Oryzias_latipes
ENSODEG00000016737	-	100	90.656	ENSORLG00020005540	cstf3	100	90.656	Oryzias_latipes_hni
ENSODEG00000016737	-	100	90.516	ENSORLG00015003551	cstf3	100	90.516	Oryzias_latipes_hsok
ENSODEG00000016737	-	100	90.098	ENSOMEG00000003848	cstf3	100	90.098	Oryzias_melastigma
ENSODEG00000016737	-	100	99.028	ENSOGAG00000010229	CSTF3	100	99.028	Otolemur_garnettii
ENSODEG00000016737	-	90	99.689	ENSOARG00000017271	CSTF3	99	99.689	Ovis_aries
ENSODEG00000016737	-	99	97.571	ENSPPAG00000027358	CSTF3	99	97.571	Pan_paniscus
ENSODEG00000016737	-	100	99.721	ENSPPRG00000016852	CSTF3	100	99.721	Panthera_pardus
ENSODEG00000016737	-	100	99.721	ENSPTIG00000008716	CSTF3	100	99.721	Panthera_tigris_altaica
ENSODEG00000016737	-	100	99.721	ENSPTRG00000003485	CSTF3	100	99.721	Pan_troglodytes
ENSODEG00000016737	-	100	99.721	ENSPANG00000013722	CSTF3	100	99.721	Papio_anubis
ENSODEG00000016737	-	100	92.329	ENSPKIG00000023648	cstf3	100	92.329	Paramormyrops_kingsleyae
ENSODEG00000016737	-	100	96.936	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSODEG00000016737	-	76	94.881	ENSPMGG00000000164	cstf3	99	94.881	Periophthalmus_magnuspinnatus
ENSODEG00000016737	-	100	99.163	ENSPEMG00000011481	Cstf3	100	99.163	Peromyscus_maniculatus_bairdii
ENSODEG00000016737	-	99	80.337	ENSPMAG00000007282	cstf3	99	80.337	Petromyzon_marinus
ENSODEG00000016737	-	99	95.910	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSODEG00000016737	-	100	80.919	ENSPCIG00000030419	-	90	81.616	Phascolarctos_cinereus
ENSODEG00000016737	-	100	90.808	ENSPFOG00000017239	cstf3	100	90.808	Poecilia_formosa
ENSODEG00000016737	-	100	90.808	ENSPLAG00000009456	cstf3	100	90.808	Poecilia_latipinna
ENSODEG00000016737	-	100	90.808	ENSPMEG00000010320	cstf3	100	90.808	Poecilia_mexicana
ENSODEG00000016737	-	100	90.808	ENSPREG00000013549	cstf3	100	90.808	Poecilia_reticulata
ENSODEG00000016737	-	100	99.721	ENSPPYG00000003375	CSTF3	100	99.721	Pongo_abelii
ENSODEG00000016737	-	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSODEG00000016737	-	99	95.845	ENSPCOG00000014417	CSTF3	99	95.845	Propithecus_coquereli
ENSODEG00000016737	-	100	94.282	ENSPVAG00000002350	CSTF3	100	94.282	Pteropus_vampyrus
ENSODEG00000016737	-	99	91.298	ENSPNYG00000018259	cstf3	100	91.365	Pundamilia_nyererei
ENSODEG00000016737	-	100	91.911	ENSPNAG00000020182	cstf3	100	91.911	Pygocentrus_nattereri
ENSODEG00000016737	-	89	99.040	ENSRNOG00000012089	Cstf3	100	99.040	Rattus_norvegicus
ENSODEG00000016737	-	99	98.449	ENSRBIG00000044258	CSTF3	100	99.840	Rhinopithecus_bieti
ENSODEG00000016737	-	100	99.721	ENSRROG00000043450	CSTF3	100	99.840	Rhinopithecus_roxellana
ENSODEG00000016737	-	100	99.721	ENSSBOG00000024764	CSTF3	100	99.840	Saimiri_boliviensis_boliviensis
ENSODEG00000016737	-	100	97.629	ENSSHAG00000018128	-	100	97.629	Sarcophilus_harrisii
ENSODEG00000016737	-	100	85.216	ENSSHAG00000003135	-	99	85.216	Sarcophilus_harrisii
ENSODEG00000016737	-	100	92.050	ENSSFOG00015022133	cstf3	100	92.050	Scleropages_formosus
ENSODEG00000016737	-	100	90.251	ENSSMAG00000002197	cstf3	100	90.251	Scophthalmus_maximus
ENSODEG00000016737	-	100	91.086	ENSSDUG00000020426	cstf3	100	91.086	Seriola_dumerili
ENSODEG00000016737	-	100	91.226	ENSSLDG00000025649	cstf3	100	91.226	Seriola_lalandi_dorsalis
ENSODEG00000016737	-	100	99.303	ENSSARG00000000391	CSTF3	100	99.303	Sorex_araneus
ENSODEG00000016737	-	96	97.106	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSODEG00000016737	-	100	91.226	ENSSPAG00000004958	cstf3	100	91.226	Stegastes_partitus
ENSODEG00000016737	-	99	99.162	ENSSSCG00000040954	CSTF3	100	99.162	Sus_scrofa
ENSODEG00000016737	-	99	97.740	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSODEG00000016737	-	100	90.111	ENSTRUG00000004959	cstf3	100	90.111	Takifugu_rubripes
ENSODEG00000016737	-	99	90.845	ENSTNIG00000013811	cstf3	99	90.845	Tetraodon_nigroviridis
ENSODEG00000016737	-	90	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSODEG00000016737	-	100	96.653	ENSTTRG00000016366	CSTF3	100	96.653	Tursiops_truncatus
ENSODEG00000016737	-	99	99.577	ENSUMAG00000018971	CSTF3	100	99.520	Ursus_maritimus
ENSODEG00000016737	-	100	99.582	ENSVPAG00000007800	CSTF3	100	99.582	Vicugna_pacos
ENSODEG00000016737	-	100	99.858	ENSVVUG00000014938	CSTF3	100	99.840	Vulpes_vulpes
ENSODEG00000016737	-	66	43.595	ENSXETG00000017946	-	99	43.595	Xenopus_tropicalis
ENSODEG00000016737	-	88	80.449	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSODEG00000016737	-	89	90.560	ENSXCOG00000011741	cstf3	100	90.560	Xiphophorus_couchianus
ENSODEG00000016737	-	100	90.808	ENSXMAG00000009545	cstf3	100	90.808	Xiphophorus_maculatus