EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000016743 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: suppressor of SWI4 1 homolog
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 3628 bases
Position: chrJH651565.1:11979648-11983275
Accession: 101589541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022814	Brix	PF04427.18	2.8e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023079	-	1475	XM_004633008	ENSODEP00000022814	471 (aa)	XP_004633065	-

Gene Model

Click here to download ENSODEG00000016743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016743	-	93	79.365	ENSG00000243207	PPAN-P2RY11	84	79.365	Homo_sapiens
ENSODEG00000016743	-	96	77.753	ENSG00000130810	PPAN	99	92.344	Homo_sapiens
ENSODEG00000016743	-	94	60.444	ENSAPOG00000017687	ppan	83	60.222	Acanthochromis_polyacanthus
ENSODEG00000016743	-	99	85.653	ENSAMEG00000011989	-	100	85.653	Ailuropoda_melanoleuca
ENSODEG00000016743	-	93	59.909	ENSACIG00000007417	ppan	83	59.681	Amphilophus_citrinellus
ENSODEG00000016743	-	95	60.532	ENSAOCG00000005416	ppan	83	60.310	Amphiprion_ocellaris
ENSODEG00000016743	-	95	60.532	ENSAPEG00000010382	ppan	83	60.310	Amphiprion_percula
ENSODEG00000016743	-	96	59.211	ENSATEG00000021221	ppan	85	58.991	Anabas_testudineus
ENSODEG00000016743	-	91	63.721	ENSACAG00000003838	-	79	63.721	Anolis_carolinensis
ENSODEG00000016743	-	97	74.561	ENSANAG00000020371	-	100	71.399	Aotus_nancymaae
ENSODEG00000016743	-	91	72.184	ENSANAG00000038012	-	95	81.006	Aotus_nancymaae
ENSODEG00000016743	-	90	59.070	ENSACLG00000019215	ppan	81	58.837	Astatotilapia_calliptera
ENSODEG00000016743	-	86	58.477	ENSAMXG00000032540	ppan	75	58.231	Astyanax_mexicanus
ENSODEG00000016743	-	100	84.177	ENSBTAG00000012745	PPAN	100	84.177	Bos_taurus
ENSODEG00000016743	-	74	38.798	WBGene00003062	lpd-6	58	40.000	Caenorhabditis_elegans
ENSODEG00000016743	-	100	73.885	ENSCJAG00000039296	PPAN	100	73.885	Callithrix_jacchus
ENSODEG00000016743	-	90	89.835	ENSCAFG00000017917	P2RY11	75	89.835	Canis_familiaris
ENSODEG00000016743	-	99	85.288	ENSCAFG00020023621	-	99	85.288	Canis_lupus_dingo
ENSODEG00000016743	-	100	84.501	ENSCHIG00000006450	-	100	84.501	Capra_hircus
ENSODEG00000016743	-	59	86.592	ENSTSYG00000034845	-	89	91.515	Carlito_syrichta
ENSODEG00000016743	-	73	91.279	ENSCPOG00000025539	-	93	91.279	Cavia_porcellus
ENSODEG00000016743	-	94	75.847	ENSCCAG00000032527	-	100	72.824	Cebus_capucinus
ENSODEG00000016743	-	91	80.233	ENSCATG00000040554	-	100	75.840	Cercocebus_atys
ENSODEG00000016743	-	97	91.974	ENSCLAG00000009362	-	100	91.983	Chinchilla_lanigera
ENSODEG00000016743	-	97	77.560	ENSCSAG00000007423	-	99	77.004	Chlorocebus_sabaeus
ENSODEG00000016743	-	95	59.843	ENSCPBG00000005372	-	80	67.512	Chrysemys_picta_bellii
ENSODEG00000016743	-	92	43.207	ENSCING00000005420	ppan	99	42.138	Ciona_intestinalis
ENSODEG00000016743	-	89	43.519	ENSCSAVG00000005816	-	87	43.519	Ciona_savignyi
ENSODEG00000016743	-	81	76.440	ENSCANG00000036259	-	97	74.500	Colobus_angolensis_palliatus
ENSODEG00000016743	-	99	83.333	ENSCGRG00001015990	Ppan	99	83.333	Cricetulus_griseus_chok1gshd
ENSODEG00000016743	-	85	81.235	ENSCGRG00000012785	Ppan	99	81.235	Cricetulus_griseus_crigri
ENSODEG00000016743	-	86	63.793	ENSCSEG00000021023	ppan	73	63.793	Cynoglossus_semilaevis
ENSODEG00000016743	-	87	61.800	ENSCVAG00000013547	ppan	76	61.557	Cyprinodon_variegatus
ENSODEG00000016743	-	91	60.789	ENSDARG00000022232	ppan	82	60.325	Danio_rerio
ENSODEG00000016743	-	64	93.000	ENSDNOG00000047670	-	68	93.000	Dasypus_novemcinctus
ENSODEG00000016743	-	73	90.698	ENSDORG00000003829	Ppan	100	90.698	Dipodomys_ordii
ENSODEG00000016743	-	72	39.181	FBgn0010770	ppan	80	38.653	Drosophila_melanogaster
ENSODEG00000016743	-	98	81.641	ENSETEG00000019286	-	98	81.425	Echinops_telfairi
ENSODEG00000016743	-	54	63.889	ENSEBUG00000004335	ppan	61	63.889	Eptatretus_burgeri
ENSODEG00000016743	-	100	84.713	ENSEASG00005010574	-	100	84.713	Equus_asinus_asinus
ENSODEG00000016743	-	100	83.864	ENSECAG00000024469	-	100	83.864	Equus_caballus
ENSODEG00000016743	-	95	57.391	ENSELUG00000024160	ppan	86	58.333	Esox_lucius
ENSODEG00000016743	-	98	82.937	ENSFCAG00000009388	-	90	82.937	Felis_catus
ENSODEG00000016743	-	80	74.026	ENSFDAG00000008458	-	100	71.264	Fukomys_damarensis
ENSODEG00000016743	-	92	59.080	ENSFHEG00000001554	ppan	81	58.770	Fundulus_heteroclitus
ENSODEG00000016743	-	94	57.812	ENSGMOG00000003431	ppan	82	57.589	Gadus_morhua
ENSODEG00000016743	-	85	56.391	ENSGALG00000051597	-	84	61.988	Gallus_gallus
ENSODEG00000016743	-	87	62.410	ENSGAFG00000015832	ppan	76	62.410	Gambusia_affinis
ENSODEG00000016743	-	90	62.093	ENSGACG00000013723	ppan	81	61.751	Gasterosteus_aculeatus
ENSODEG00000016743	-	95	66.667	ENSGAGG00000009455	-	83	66.667	Gopherus_agassizii
ENSODEG00000016743	-	86	75.735	ENSGGOG00000039459	PPAN	100	74.941	Gorilla_gorilla
ENSODEG00000016743	-	90	59.302	ENSHBUG00000021830	ppan	81	59.070	Haplochromis_burtoni
ENSODEG00000016743	-	96	88.791	ENSHGLG00000006964	-	99	87.342	Heterocephalus_glaber_female
ENSODEG00000016743	-	96	88.791	ENSHGLG00100011618	-	99	87.342	Heterocephalus_glaber_male
ENSODEG00000016743	-	93	49.661	ENSHCOG00000016751	ppan	83	49.342	Hippocampus_comes
ENSODEG00000016743	-	86	63.636	ENSIPUG00000005082	ppan	72	62.927	Ictalurus_punctatus
ENSODEG00000016743	-	100	84.177	ENSSTOG00000010828	-	100	84.177	Ictidomys_tridecemlineatus
ENSODEG00000016743	-	100	83.122	ENSJJAG00000016362	Ppan	100	83.122	Jaculus_jaculus
ENSODEG00000016743	-	94	58.784	ENSKMAG00000016509	ppan	83	58.705	Kryptolebias_marmoratus
ENSODEG00000016743	-	85	62.250	ENSLBEG00000020897	ppan	94	61.881	Labrus_bergylta
ENSODEG00000016743	-	95	54.585	ENSLACG00000001451	ppan	97	54.167	Latimeria_chalumnae
ENSODEG00000016743	-	99	57.350	ENSLOCG00000007381	ppan	91	57.350	Lepisosteus_oculatus
ENSODEG00000016743	-	98	82.430	ENSLAFG00000016399	-	98	82.213	Loxodonta_africana
ENSODEG00000016743	-	97	76.471	ENSMFAG00000042854	-	100	75.630	Macaca_fascicularis
ENSODEG00000016743	-	89	81.517	ENSMMUG00000017211	PPAN	100	87.629	Macaca_mulatta
ENSODEG00000016743	-	97	76.906	ENSMNEG00000031363	-	100	76.050	Macaca_nemestrina
ENSODEG00000016743	-	88	81.579	ENSMLEG00000042991	-	100	75.840	Mandrillus_leucophaeus
ENSODEG00000016743	-	94	59.513	ENSMAMG00000012418	ppan	85	59.292	Mastacembelus_armatus
ENSODEG00000016743	-	90	59.070	ENSMZEG00005018872	ppan	98	60.000	Maylandia_zebra
ENSODEG00000016743	-	99	83.761	ENSMAUG00000000310	Ppan	99	83.761	Mesocricetus_auratus
ENSODEG00000016743	-	96	81.416	ENSMICG00000047321	-	100	80.467	Microcebus_murinus
ENSODEG00000016743	-	96	85.307	ENSMOCG00000016402	Ppan	98	85.307	Microtus_ochrogaster
ENSODEG00000016743	-	90	61.124	ENSMMOG00000011584	ppan	82	60.890	Mola_mola
ENSODEG00000016743	-	93	71.818	ENSMODG00000005158	PPAN	91	71.591	Monodelphis_domestica
ENSODEG00000016743	-	99	60.000	ENSMALG00000015931	ppan	87	59.787	Monopterus_albus
ENSODEG00000016743	-	99	81.876	MGP_CAROLIEiJ_G0031850	Ppan	99	81.876	Mus_caroli
ENSODEG00000016743	-	99	81.876	ENSMUSG00000004100	Ppan	99	81.876	Mus_musculus
ENSODEG00000016743	-	97	82.900	MGP_PahariEiJ_G0014716	Ppan	98	82.900	Mus_pahari
ENSODEG00000016743	-	99	81.663	MGP_SPRETEiJ_G0032974	Ppan	99	81.663	Mus_spretus
ENSODEG00000016743	-	99	86.258	ENSMPUG00000006866	-	99	86.258	Mustela_putorius_furo
ENSODEG00000016743	-	100	83.333	ENSMLUG00000014186	-	100	83.333	Myotis_lucifugus
ENSODEG00000016743	-	79	78.226	ENSNGAG00000012813	Ppan	100	78.226	Nannospalax_galili
ENSODEG00000016743	-	90	59.302	ENSNBRG00000008460	ppan	81	59.070	Neolamprologus_brichardi
ENSODEG00000016743	-	97	77.342	ENSNLEG00000012048	-	100	76.681	Nomascus_leucogenys
ENSODEG00000016743	-	93	70.068	ENSMEUG00000007968	-	98	69.841	Notamacropus_eugenii
ENSODEG00000016743	-	88	87.019	ENSOPRG00000006982	-	53	86.635	Ochotona_princeps
ENSODEG00000016743	-	90	59.535	ENSONIG00000001598	ppan	81	59.302	Oreochromis_niloticus
ENSODEG00000016743	-	98	65.762	ENSOANG00000006740	PPAN	98	65.762	Ornithorhynchus_anatinus
ENSODEG00000016743	-	97	57.883	ENSORLG00000005634	ppan	88	57.692	Oryzias_latipes
ENSODEG00000016743	-	97	57.883	ENSORLG00020003966	ppan	88	57.692	Oryzias_latipes_hni
ENSODEG00000016743	-	97	57.667	ENSORLG00015016869	ppan	86	60.819	Oryzias_latipes_hsok
ENSODEG00000016743	-	97	57.112	ENSOMEG00000023943	ppan	88	57.112	Oryzias_melastigma
ENSODEG00000016743	-	100	79.493	ENSOGAG00000014454	-	100	79.493	Otolemur_garnettii
ENSODEG00000016743	-	83	84.596	ENSOARG00000014981	-	84	84.596	Ovis_aries
ENSODEG00000016743	-	97	77.342	ENSPPAG00000039744	-	100	76.681	Pan_paniscus
ENSODEG00000016743	-	99	84.698	ENSPPRG00000023895	-	99	84.698	Panthera_pardus
ENSODEG00000016743	-	89	83.493	ENSPTIG00000015960	-	99	83.693	Panthera_tigris_altaica
ENSODEG00000016743	-	97	77.124	ENSPTRG00000010459	PPAN	100	76.471	Pan_troglodytes
ENSODEG00000016743	-	91	80.233	ENSPANG00000005948	-	100	75.840	Papio_anubis
ENSODEG00000016743	-	96	57.549	ENSPMGG00000001212	ppan	86	57.549	Periophthalmus_magnuspinnatus
ENSODEG00000016743	-	99	84.009	ENSPEMG00000015393	Ppan	99	84.009	Peromyscus_maniculatus_bairdii
ENSODEG00000016743	-	99	68.076	ENSPCIG00000018786	-	89	67.573	Phascolarctos_cinereus
ENSODEG00000016743	-	93	59.459	ENSPFOG00000005396	ppan	76	61.928	Poecilia_formosa
ENSODEG00000016743	-	93	59.284	ENSPLAG00000021445	ppan	76	61.928	Poecilia_latipinna
ENSODEG00000016743	-	93	59.685	ENSPMEG00000011625	ppan	76	62.169	Poecilia_mexicana
ENSODEG00000016743	-	98	57.294	ENSPREG00000006330	ppan	85	57.294	Poecilia_reticulata
ENSODEG00000016743	-	90	81.221	ENSPPYG00000009543	-	53	81.221	Pongo_abelii
ENSODEG00000016743	-	85	79.602	ENSPCAG00000007303	-	99	78.856	Procavia_capensis
ENSODEG00000016743	-	96	82.018	ENSPCOG00000027096	-	100	81.053	Propithecus_coquereli
ENSODEG00000016743	-	100	81.818	ENSPVAG00000003673	-	100	81.395	Pteropus_vampyrus
ENSODEG00000016743	-	90	59.207	ENSPNYG00000013872	ppan	81	58.974	Pundamilia_nyererei
ENSODEG00000016743	-	94	58.837	ENSPNAG00000017058	ppan	82	58.837	Pygocentrus_nattereri
ENSODEG00000016743	-	99	81.529	ENSRNOG00000020608	Ppan	100	81.529	Rattus_norvegicus
ENSODEG00000016743	-	97	76.906	ENSRBIG00000041320	-	98	76.774	Rhinopithecus_bieti
ENSODEG00000016743	-	81	85.827	ENSRROG00000038245	-	98	86.667	Rhinopithecus_roxellana
ENSODEG00000016743	-	97	77.024	ENSRROG00000034660	-	98	76.890	Rhinopithecus_roxellana
ENSODEG00000016743	-	72	35.266	YDR312W	-	98	33.703	Saccharomyces_cerevisiae
ENSODEG00000016743	-	71	34.230	YHR066W	-	97	34.694	Saccharomyces_cerevisiae
ENSODEG00000016743	-	100	73.739	ENSSBOG00000026246	-	100	73.895	Saimiri_boliviensis_boliviensis
ENSODEG00000016743	-	80	71.391	ENSSHAG00000009305	-	91	71.391	Sarcophilus_harrisii
ENSODEG00000016743	-	96	59.300	ENSSFOG00015023726	ppan	88	59.737	Scleropages_formosus
ENSODEG00000016743	-	87	62.077	ENSSMAG00000004098	ppan	76	61.836	Scophthalmus_maximus
ENSODEG00000016743	-	94	61.937	ENSSDUG00000021301	ppan	82	61.712	Seriola_dumerili
ENSODEG00000016743	-	90	63.615	ENSSLDG00000016106	ppan	80	63.380	Seriola_lalandi_dorsalis
ENSODEG00000016743	-	94	62.613	ENSSPAG00000000160	ppan	82	62.613	Stegastes_partitus
ENSODEG00000016743	-	100	86.412	ENSSSCG00000013662	PPAN	100	86.412	Sus_scrofa
ENSODEG00000016743	-	86	63.054	ENSTRUG00000007656	ppan	79	63.054	Takifugu_rubripes
ENSODEG00000016743	-	91	62.471	ENSTNIG00000018564	ppan	90	62.937	Tetraodon_nigroviridis
ENSODEG00000016743	-	64	92.149	ENSTBEG00000002721	-	65	92.149	Tupaia_belangeri
ENSODEG00000016743	-	99	78.587	ENSTTRG00000004530	-	99	78.587	Tursiops_truncatus
ENSODEG00000016743	-	99	85.075	ENSVVUG00000028309	-	99	85.075	Vulpes_vulpes
ENSODEG00000016743	-	91	62.037	ENSXETG00000022055	ppan	78	62.037	Xenopus_tropicalis
ENSODEG00000016743	-	98	53.632	ENSXMAG00000028708	ppan	87	53.632	Xiphophorus_maculatus