EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000016788 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
1473 bases
Position
chrJH651525.1:8912049-8913521
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000022870MMR_HSR1PF01926.236.5e-0511
ENSODEP00000022871MMR_HSR1PF01926.239.2e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000023137-678-ENSODEP00000022871225 (aa)--
ENSODET00000023136-597-ENSODEP00000022870198 (aa)--
Gene Model
Click here to download ENSODEG00000016788's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016788's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000016788-9936.816ENSODEG00000002979RAB33B8736.816
ENSODEG00000016788-7739.103ENSODEG00000002835RAB7A9639.103
ENSODEG00000016788-7933.750ENSODEG00000012270RAB346233.750
ENSODEG00000016788-8043.038ENSODEG00000005942RAB6A7643.038
ENSODEG00000016788-8635.429ENSODEG00000009994RERG8535.429
ENSODEG00000016788-9559.259ENSODEG00000002013RAB148859.259
ENSODEG00000016788-9687.895ENSODEG00000001343RAB2B9284.848
ENSODEG00000016788-8038.889ENSODEG00000009016RAB365538.889
ENSODEG00000016788-7930.864ENSODEG00000007488DNAJC275930.864
ENSODEG00000016788-8245.399ENSODEG00000017920RAB5C8441.436
ENSODEG00000016788-8839.698ENSODEG00000003833RAB309739.698
ENSODEG00000016788-6242.276ENSODEG00000000290-8342.276
ENSODEG00000016788-8749.419ENSODEG00000017847-8649.419
ENSODEG00000016788-9792.746ENSODEG00000002369-9292.308
ENSODEG00000016788-9737.824ENSODEG00000000054RAB22A9737.824
ENSODEG00000016788-8448.795ENSODEG00000010443-8248.795
ENSODEG00000016788-7634.868ENSODEG00000015703HRAS8635.366
ENSODEG00000016788-8046.203ENSODEG00000007219RAB357846.203
ENSODEG00000016788-9448.421ENSODEG00000004150-9048.421
ENSODEG00000016788-9539.683ENSODEG00000003860RAB5B9039.175
ENSODEG00000016788-8534.911ENSODEG00000016056RAB237134.911
ENSODEG00000016788-8237.126ENSODEG00000019004RAB9A8337.126
ENSODEG00000016788-7635.526ENSODEG00000010412KRAS8635.976
ENSODEG00000016788-9141.758ENSODEG00000006414RAB128639.683
ENSODEG00000016788-7635.526ENSODEG00000007937NRAS8635.976
ENSODEG00000016788-9848.020ENSODEG00000016878-9348.020
ENSODEG00000016788-7833.121ENSODEG00000018151MRAS8134.320
ENSODEG00000016788-9331.053ENSODEG00000010425RAB249132.105
ENSODEG00000016788-6346.774ENSODEG00000012634-9846.774
ENSODEG00000016788-7733.333ENSODEG00000015650-6733.987
ENSODEG00000016788-9842.079ENSODEG00000009908RAB259442.079
ENSODEG00000016788-8947.159ENSODEG00000011248-9544.737
ENSODEG00000016788-8240.244ENSODEG00000019065-8839.759
ENSODEG00000016788-8045.570ENSODEG00000013827RAB157545.570
ENSODEG00000016788-9444.681ENSODEG00000000520RAB39B8844.681
ENSODEG00000016788-8539.080ENSODEG00000002594-6239.080
ENSODEG00000016788-8038.415ENSODEG00000011726RAB33A6938.415
ENSODEG00000016788-7734.615ENSODEG00000009963RHEB8334.615
ENSODEG00000016788-9849.010ENSODEG00000011371RAB11B9349.010
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000016788-9688.421ENSG00000129472RAB2B10088.710Homo_sapiens
ENSODEG00000016788-9792.746ENSG00000104388RAB2A9292.308Homo_sapiens
ENSODEG00000016788-9693.684ENSAPOG00000009138rab2a9490.148Acanthochromis_polyacanthus
ENSODEG00000016788-9688.421ENSAMEG00000006285RAB2B9285.354Ailuropoda_melanoleuca
ENSODEG00000016788-9693.684ENSAOCG00000014658rab2a9490.148Amphiprion_ocellaris
ENSODEG00000016788-9693.684ENSAPEG00000010294rab2a9490.148Amphiprion_percula
ENSODEG00000016788-10090.909ENSATEG00000002553rab2a9990.909Anabas_testudineus
ENSODEG00000016788-9693.684ENSACAG00000005694RAB2A9292.308Anolis_carolinensis
ENSODEG00000016788-9572.487ENSACAG00000003034RAB2B9768.447Anolis_carolinensis
ENSODEG00000016788-9688.421ENSANAG00000018900RAB2B9583.010Aotus_nancymaae
ENSODEG00000016788-9792.746ENSANAG00000035405RAB2A9292.308Aotus_nancymaae
ENSODEG00000016788-9792.746ENSAMXG00000036772rab2a9292.308Astyanax_mexicanus
ENSODEG00000016788-9986.224ENSBTAG00000044207RAB2B9285.354Bos_taurus
ENSODEG00000016788-9782.902ENSBTAG00000000948RAB2A9182.564Bos_taurus
ENSODEG00000016788-9986.735WBGene00006833unc-1089286.735Caenorhabditis_elegans
ENSODEG00000016788-9688.421ENSCJAG00000008981RAB2B9583.010Callithrix_jacchus
ENSODEG00000016788-9792.746ENSCAFG00000007153RAB2A8492.308Canis_familiaris
ENSODEG00000016788-9688.421ENSCAFG00000005641RAB2B9285.354Canis_familiaris
ENSODEG00000016788-9391.892ENSCAFG00020021797-8591.444Canis_lupus_dingo
ENSODEG00000016788-9986.224ENSCHIG00000017531-9288.482Capra_hircus
ENSODEG00000016788-9792.746ENSCHIG00000020374RAB2A9292.308Capra_hircus
ENSODEG00000016788-9792.746ENSTSYG00000030301RAB2A9292.308Carlito_syrichta
ENSODEG00000016788-9688.421ENSTSYG00000033832RAB2B9583.010Carlito_syrichta
ENSODEG00000016788-9688.421ENSCPOG00000026575RAB2B9583.010Cavia_porcellus
ENSODEG00000016788-9670.526ENSCCAG00000028745RAB2B9466.505Cebus_capucinus
ENSODEG00000016788-9792.746ENSCCAG00000025945RAB2A9292.308Cebus_capucinus
ENSODEG00000016788-9688.421ENSCATG00000044849RAB2B9583.010Cercocebus_atys
ENSODEG00000016788-9792.746ENSCATG00000028334RAB2A9292.308Cercocebus_atys
ENSODEG00000016788-9792.746ENSCLAG00000005708RAB2A9292.308Chinchilla_lanigera
ENSODEG00000016788-9985.714ENSCLAG00000002400RAB2B9284.848Chinchilla_lanigera
ENSODEG00000016788-9688.421ENSCSAG00000016480RAB2B9583.010Chlorocebus_sabaeus
ENSODEG00000016788-9792.746ENSCSAG00000014359RAB2A9292.308Chlorocebus_sabaeus
ENSODEG00000016788-9882.474ENSCHOG00000000710RAB2B9781.633Choloepus_hoffmanni
ENSODEG00000016788-9687.368ENSCPBG00000012691RAB2B8986.911Chrysemys_picta_bellii
ENSODEG00000016788-9792.746ENSCPBG00000023254RAB2A9292.308Chrysemys_picta_bellii
ENSODEG00000016788-9191.713ENSCING00000019877-9191.713Ciona_intestinalis
ENSODEG00000016788-9691.579ENSCSAVG00000002088-9786.473Ciona_savignyi
ENSODEG00000016788-9688.421ENSCANG00000029206RAB2B9585.354Colobus_angolensis_palliatus
ENSODEG00000016788-9688.421ENSCGRG00001020833-9683.092Cricetulus_griseus_chok1gshd
ENSODEG00000016788-9792.746ENSCGRG00001020076Rab2a9292.308Cricetulus_griseus_chok1gshd
ENSODEG00000016788-9688.421ENSCGRG00000010264-9683.092Cricetulus_griseus_crigri
ENSODEG00000016788-9693.684ENSCSEG00000017211rab2a9292.308Cynoglossus_semilaevis
ENSODEG00000016788-9693.684ENSCVAG00000017623rab2a9292.308Cyprinodon_variegatus
ENSODEG00000016788-9792.746ENSDARG00000020261rab2a9292.308Danio_rerio
ENSODEG00000016788-9792.746ENSDORG00000025014Rab2a9292.308Dipodomys_ordii
ENSODEG00000016788-9688.421ENSDORG00000012048Rab2b9583.010Dipodomys_ordii
ENSODEG00000016788-9987.755FBgn0014009Rab29287.755Drosophila_melanogaster
ENSODEG00000016788-9792.746ENSETEG00000010340RAB2A9292.308Echinops_telfairi
ENSODEG00000016788-9680.000ENSEASG00005011485RAB2B9575.243Equus_asinus_asinus
ENSODEG00000016788-9792.746ENSEASG00005016261RAB2A9292.308Equus_asinus_asinus
ENSODEG00000016788-9688.421ENSECAG00000006219RAB2B9583.010Equus_caballus
ENSODEG00000016788-9792.746ENSECAG00000012124RAB2A9292.308Equus_caballus
ENSODEG00000016788-9792.746ENSELUG00000023964rab2a9292.308Esox_lucius
ENSODEG00000016788-9688.421ENSFCAG00000007745RAB2B9285.354Felis_catus
ENSODEG00000016788-9792.746ENSFCAG00000024352RAB2A9292.308Felis_catus
ENSODEG00000016788-9792.746ENSFALG00000005613RAB2A9292.308Ficedula_albicollis
ENSODEG00000016788-9688.421ENSFDAG00000017456RAB2B9583.010Fukomys_damarensis
ENSODEG00000016788-9693.684ENSFHEG00000001296rab2a9591.045Fundulus_heteroclitus
ENSODEG00000016788-9991.371ENSGALG00000015450RAB2A9991.371Gallus_gallus
ENSODEG00000016788-9693.684ENSGAFG00000006846rab2a9788.038Gambusia_affinis
ENSODEG00000016788-9292.896ENSGACG00000014905rab2a8990.052Gasterosteus_aculeatus
ENSODEG00000016788-9792.228ENSGAGG00000005606RAB2A9291.795Gopherus_agassizii
ENSODEG00000016788-9687.368ENSGAGG00000023041RAB2B8986.911Gopherus_agassizii
ENSODEG00000016788-9688.421ENSGGOG00000014650RAB2B9585.354Gorilla_gorilla
ENSODEG00000016788-9792.746ENSGGOG00000043049RAB2A9292.308Gorilla_gorilla
ENSODEG00000016788-9693.684ENSHBUG00000019164rab2a9292.308Haplochromis_burtoni
ENSODEG00000016788-9792.746ENSHGLG00000019399RAB2A9292.308Heterocephalus_glaber_female
ENSODEG00000016788-9688.421ENSHGLG00000004071RAB2B9583.010Heterocephalus_glaber_female
ENSODEG00000016788-9792.746ENSHGLG00100015803RAB2A9292.308Heterocephalus_glaber_male
ENSODEG00000016788-9693.684ENSHCOG00000014428rab2a9292.308Hippocampus_comes
ENSODEG00000016788-9792.746ENSIPUG00000007539rab2a9292.308Ictalurus_punctatus
ENSODEG00000016788-9688.421ENSSTOG00000001886RAB2B9285.859Ictidomys_tridecemlineatus
ENSODEG00000016788-9792.746ENSJJAG00000000676Rab2a9292.308Jaculus_jaculus
ENSODEG00000016788-9693.684ENSKMAG00000009799rab2a9292.308Kryptolebias_marmoratus
ENSODEG00000016788-9693.684ENSLBEG00000020796rab2a9292.308Labrus_bergylta
ENSODEG00000016788-8190.000ENSLACG00000014446RAB2B9790.000Latimeria_chalumnae
ENSODEG00000016788-9792.746ENSLACG00000012521RAB2A9589.604Latimeria_chalumnae
ENSODEG00000016788-9792.746ENSLOCG00000005108rab2a9292.308Lepisosteus_oculatus
ENSODEG00000016788-9792.746ENSLAFG00000015567RAB2A9292.308Loxodonta_africana
ENSODEG00000016788-9688.421ENSMFAG00000027114RAB2B9583.010Macaca_fascicularis
ENSODEG00000016788-9792.746ENSMFAG00000037805RAB2A9292.308Macaca_fascicularis
ENSODEG00000016788-9688.421ENSMMUG00000014992RAB2B9585.354Macaca_mulatta
ENSODEG00000016788-9792.746ENSMMUG00000017038RAB2A9694.340Macaca_mulatta
ENSODEG00000016788-9688.421ENSMNEG00000032275RAB2B9583.010Macaca_nemestrina
ENSODEG00000016788-9792.746ENSMNEG00000037175RAB2A9292.308Macaca_nemestrina
ENSODEG00000016788-9688.421ENSMLEG00000043065RAB2B9583.010Mandrillus_leucophaeus
ENSODEG00000016788-9693.684ENSMAMG00000011549rab2a9292.308Mastacembelus_armatus
ENSODEG00000016788-9693.684ENSMZEG00005010611rab2a9292.308Maylandia_zebra
ENSODEG00000016788-9792.746ENSMAUG00000017792Rab2a9292.308Mesocricetus_auratus
ENSODEG00000016788-9792.746ENSMICG00000034540RAB2A9292.308Microcebus_murinus
ENSODEG00000016788-9792.746ENSMOCG00000014140Rab2a9292.308Microtus_ochrogaster
ENSODEG00000016788-9688.421ENSMOCG00000013161Rab2b9682.609Microtus_ochrogaster
ENSODEG00000016788-9792.746ENSMODG00000008556RAB2A9292.308Monodelphis_domestica
ENSODEG00000016788-9689.474ENSMODG00000006121RAB2B8988.601Monodelphis_domestica
ENSODEG00000016788-9693.684ENSMALG00000004342rab2a9292.308Monopterus_albus
ENSODEG00000016788-10084.080MGP_CAROLIEiJ_G0019238Rab2b9483.663Mus_caroli
ENSODEG00000016788-9792.746MGP_CAROLIEiJ_G0025796Rab2a9292.308Mus_caroli
ENSODEG00000016788-10084.080ENSMUSG00000022159Rab2b9582.927Mus_musculus
ENSODEG00000016788-9792.746ENSMUSG00000047187Rab2a9292.308Mus_musculus
ENSODEG00000016788-9792.746MGP_PahariEiJ_G0023919Rab2a9292.308Mus_pahari
ENSODEG00000016788-10084.080MGP_PahariEiJ_G0030259Rab2b9384.080Mus_pahari
ENSODEG00000016788-10084.080MGP_SPRETEiJ_G0020130Rab2b9582.927Mus_spretus
ENSODEG00000016788-9792.746MGP_SPRETEiJ_G0026744Rab2a9292.308Mus_spretus
ENSODEG00000016788-9687.958ENSMPUG00000000177RAB2B9482.609Mustela_putorius_furo
ENSODEG00000016788-9792.746ENSMLUG00000002855RAB2A9292.308Myotis_lucifugus
ENSODEG00000016788-9688.421ENSMLUG00000001902RAB2B9086.598Myotis_lucifugus
ENSODEG00000016788-9792.746ENSNGAG00000020764Rab2a9292.308Nannospalax_galili
ENSODEG00000016788-9688.947ENSNGAG00000017091Rab2b9683.575Nannospalax_galili
ENSODEG00000016788-9693.684ENSNBRG00000001241rab2a9292.308Neolamprologus_brichardi
ENSODEG00000016788-9792.746ENSNLEG00000036148RAB2A9292.308Nomascus_leucogenys
ENSODEG00000016788-9688.421ENSNLEG00000014534RAB2B9585.354Nomascus_leucogenys
ENSODEG00000016788-9689.474ENSMEUG00000010489RAB2B8988.601Notamacropus_eugenii
ENSODEG00000016788-9688.421ENSOPRG00000016163RAB2B9582.927Ochotona_princeps
ENSODEG00000016788-9693.684ENSONIG00000016622rab2a9591.045Oreochromis_niloticus
ENSODEG00000016788-9792.746ENSOANG00000005041RAB2A9192.746Ornithorhynchus_anatinus
ENSODEG00000016788-9688.421ENSOCUG00000000331RAB2B9285.354Oryctolagus_cuniculus
ENSODEG00000016788-9693.684ENSORLG00000013432rab2a9292.308Oryzias_latipes
ENSODEG00000016788-9693.684ENSORLG00020020035rab2a9292.308Oryzias_latipes_hni
ENSODEG00000016788-9693.684ENSORLG00015020900rab2a9292.308Oryzias_latipes_hsok
ENSODEG00000016788-9693.684ENSOMEG00000016752rab2a9292.308Oryzias_melastigma
ENSODEG00000016788-9688.421ENSOGAG00000002728-9583.415Otolemur_garnettii
ENSODEG00000016788-9986.224ENSOARG00000019625RAB2B9085.354Ovis_aries
ENSODEG00000016788-9688.421ENSPPAG00000035840RAB2B9583.010Pan_paniscus
ENSODEG00000016788-9792.746ENSPPRG00000012945RAB2A9292.308Panthera_pardus
ENSODEG00000016788-9688.421ENSPPRG00000005831RAB2B9285.354Panthera_pardus
ENSODEG00000016788-9688.421ENSPTIG00000021935RAB2B9285.354Panthera_tigris_altaica
ENSODEG00000016788-9187.845ENSPTRG00000006125-10087.845Pan_troglodytes
ENSODEG00000016788-9792.746ENSPTRG00000020284RAB2A9292.308Pan_troglodytes
ENSODEG00000016788-9792.746ENSPANG00000021867RAB2A9292.308Papio_anubis
ENSODEG00000016788-9688.421ENSPANG00000021789RAB2B9583.010Papio_anubis
ENSODEG00000016788-9793.264ENSPKIG00000009739rab2a9591.542Paramormyrops_kingsleyae
ENSODEG00000016788-9792.228ENSPKIG00000005764RAB2A9291.795Paramormyrops_kingsleyae
ENSODEG00000016788-9792.228ENSPSIG00000011994RAB2A9291.795Pelodiscus_sinensis
ENSODEG00000016788-9990.306ENSPMAG00000006171-9290.306Petromyzon_marinus
ENSODEG00000016788-9089.385ENSPMAG00000008764RAB2B9789.385Petromyzon_marinus
ENSODEG00000016788-9689.474ENSPCIG00000021943RAB2B9783.333Phascolarctos_cinereus
ENSODEG00000016788-9285.787ENSPCIG00000000024-8585.787Phascolarctos_cinereus
ENSODEG00000016788-9693.684ENSPFOG00000004786rab2a9292.308Poecilia_formosa
ENSODEG00000016788-9693.684ENSPLAG00000023374rab2a9292.308Poecilia_latipinna
ENSODEG00000016788-9693.684ENSPREG00000014888rab2a9292.308Poecilia_reticulata
ENSODEG00000016788-9792.746ENSPPYG00000018617RAB2A9292.308Pongo_abelii
ENSODEG00000016788-9687.368ENSPPYG00000005597RAB2B9582.039Pongo_abelii
ENSODEG00000016788-9792.746ENSPCOG00000020717RAB2A9292.308Propithecus_coquereli
ENSODEG00000016788-9688.421ENSPVAG00000000273RAB2B9583.010Pteropus_vampyrus
ENSODEG00000016788-9693.684ENSPNYG00000012426rab2a9292.308Pundamilia_nyererei
ENSODEG00000016788-9792.746ENSPNAG00000011193rab2a9292.308Pygocentrus_nattereri
ENSODEG00000016788-9985.427ENSRNOG00000012488Rab2b9385.427Rattus_norvegicus
ENSODEG00000016788-9492.513ENSRNOG00000005963Rab2a9292.063Rattus_norvegicus
ENSODEG00000016788-9792.746ENSRBIG00000037603RAB2A9292.308Rhinopithecus_bieti
ENSODEG00000016788-9688.421ENSRBIG00000027517RAB2B9585.354Rhinopithecus_bieti
ENSODEG00000016788-9792.746ENSRROG00000031181RAB2A9292.308Rhinopithecus_roxellana
ENSODEG00000016788-9688.421ENSRROG00000039326RAB2B9585.354Rhinopithecus_roxellana
ENSODEG00000016788-9792.746ENSSBOG00000025313RAB2A9292.308Saimiri_boliviensis_boliviensis
ENSODEG00000016788-9670.526ENSSBOG00000034839RAB2B9466.505Saimiri_boliviensis_boliviensis
ENSODEG00000016788-9983.163ENSSHAG00000013149-9184.896Sarcophilus_harrisii
ENSODEG00000016788-9792.746ENSSFOG00015015034rab2a9591.045Scleropages_formosus
ENSODEG00000016788-9792.228ENSSFOG00015000865-9291.795Scleropages_formosus
ENSODEG00000016788-9693.684ENSSMAG00000001002rab2a9292.308Scophthalmus_maximus
ENSODEG00000016788-9693.684ENSSDUG00000013724rab2a9292.308Seriola_dumerili
ENSODEG00000016788-9693.684ENSSLDG00000022555rab2a9292.308Seriola_lalandi_dorsalis
ENSODEG00000016788-9688.421ENSSPUG00000010112RAB2B8987.565Sphenodon_punctatus
ENSODEG00000016788-9792.746ENSSSCG00000006232RAB2A9292.308Sus_scrofa
ENSODEG00000016788-9688.421ENSSSCG00000029544RAB2B9285.354Sus_scrofa
ENSODEG00000016788-9792.746ENSTGUG00000011182RAB2A9292.308Taeniopygia_guttata
ENSODEG00000016788-9693.684ENSTRUG00000003363rab2a9292.308Takifugu_rubripes
ENSODEG00000016788-9691.623ENSTNIG00000003472rab2a9290.306Tetraodon_nigroviridis
ENSODEG00000016788-9688.421ENSUMAG00000004940RAB2B9285.354Ursus_maritimus
ENSODEG00000016788-9685.789ENSVPAG00000007360RAB2B9680.583Vicugna_pacos
ENSODEG00000016788-9789.637ENSVVUG00000011426-9289.637Vulpes_vulpes
ENSODEG00000016788-9792.746ENSVVUG00000018053-9292.308Vulpes_vulpes
ENSODEG00000016788-9984.184ENSXETG00000017184rab2b9383.582Xenopus_tropicalis
ENSODEG00000016788-9693.684ENSXMAG00000024267rab2a9292.308Xiphophorus_maculatus

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