EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 771 bases
Position: chrJH651526.1:18708530-18709300
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000022959	RRM_1	PF00076.22	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023227	-	723	-	ENSODEP00000022959	240 (aa)	-	-

Gene Model

Click here to download ENSODEG00000016848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016848	-	97	64.919	ENSODEG00000008163	-	81	65.534
ENSODEG00000016848	-	97	60.338	ENSODEG00000006855	-	99	54.852
ENSODEG00000016848	-	93	77.021	ENSODEG00000015854	-	80	80.311
ENSODEG00000016848	-	84	64.390	ENSODEG00000019011	-	86	64.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016848	-	97	75.000	ENSG00000106682	EIF4H	83	77.670	Homo_sapiens
ENSODEG00000016848	-	89	69.828	ENSAMEG00000015416	EIF4H	90	72.727	Ailuropoda_melanoleuca
ENSODEG00000016848	-	83	47.847	ENSATEG00000000604	eif4h	80	48.571	Anabas_testudineus
ENSODEG00000016848	-	84	61.682	ENSAPLG00000009166	EIF4H	84	70.233	Anas_platyrhynchos
ENSODEG00000016848	-	97	63.780	ENSACAG00000000612	EIF4H	99	63.780	Anolis_carolinensis
ENSODEG00000016848	-	97	75.000	ENSANAG00000029696	EIF4H	83	77.670	Aotus_nancymaae
ENSODEG00000016848	-	80	51.546	ENSACLG00000010457	eif4h	77	55.330	Astatotilapia_calliptera
ENSODEG00000016848	-	80	58.937	ENSAMXG00000043588	eif4h	79	60.870	Astyanax_mexicanus
ENSODEG00000016848	-	89	66.522	ENSBTAG00000047249	EIF4H	86	68.932	Bos_taurus
ENSODEG00000016848	-	97	72.984	ENSCJAG00000019820	EIF4H	88	75.728	Callithrix_jacchus
ENSODEG00000016848	-	93	72.385	ENSCAFG00000012019	EIF4H	82	77.184	Canis_familiaris
ENSODEG00000016848	-	97	67.742	ENSCAFG00020011392	EIF4H	81	68.932	Canis_lupus_dingo
ENSODEG00000016848	-	89	67.249	ENSCHIG00000020637	EIF4H	89	69.903	Capra_hircus
ENSODEG00000016848	-	89	74.672	ENSTSYG00000006807	EIF4H	87	78.155	Carlito_syrichta
ENSODEG00000016848	-	89	71.861	ENSCAPG00000014985	EIF4H	90	75.000	Cavia_aperea
ENSODEG00000016848	-	97	73.200	ENSCPOG00000019301	EIF4H	83	75.481	Cavia_porcellus
ENSODEG00000016848	-	97	73.790	ENSCCAG00000034098	EIF4H	83	76.214	Cebus_capucinus
ENSODEG00000016848	-	86	60.731	ENSCATG00000039170	-	75	62.694	Cercocebus_atys
ENSODEG00000016848	-	97	74.597	ENSCATG00000032948	-	88	77.184	Cercocebus_atys
ENSODEG00000016848	-	89	75.546	ENSCLAG00000012003	EIF4H	85	79.126	Chinchilla_lanigera
ENSODEG00000016848	-	97	67.339	ENSCSAG00000018194	-	81	68.447	Chlorocebus_sabaeus
ENSODEG00000016848	-	89	75.109	ENSCHOG00000002525	EIF4H	90	78.641	Choloepus_hoffmanni
ENSODEG00000016848	-	97	63.281	ENSCPBG00000027695	EIF4H	99	60.547	Chrysemys_picta_bellii
ENSODEG00000016848	-	78	66.000	ENSCANG00000033751	-	83	72.289	Colobus_angolensis_palliatus
ENSODEG00000016848	-	93	71.369	ENSCANG00000005409	-	86	77.184	Colobus_angolensis_palliatus
ENSODEG00000016848	-	97	76.210	ENSCGRG00001000916	Eif4h	83	79.126	Cricetulus_griseus_chok1gshd
ENSODEG00000016848	-	89	75.546	ENSCGRG00000002277	Eif4h	90	79.126	Cricetulus_griseus_crigri
ENSODEG00000016848	-	80	52.821	ENSCSEG00000016175	eif4h	80	54.378	Cynoglossus_semilaevis
ENSODEG00000016848	-	80	55.051	ENSCVAG00000021728	eif4h	81	58.049	Cyprinodon_variegatus
ENSODEG00000016848	-	97	75.403	ENSDNOG00000049674	EIF4H	83	78.155	Dasypus_novemcinctus
ENSODEG00000016848	-	89	74.236	ENSDORG00000008131	Eif4h	90	77.670	Dipodomys_ordii
ENSODEG00000016848	-	97	74.089	ENSEASG00005015880	EIF4H	83	76.585	Equus_asinus_asinus
ENSODEG00000016848	-	97	74.089	ENSECAG00000017832	EIF4H	83	76.585	Equus_caballus
ENSODEG00000016848	-	97	75.806	ENSFCAG00000029386	EIF4H	83	78.641	Felis_catus
ENSODEG00000016848	-	97	59.216	ENSFALG00000007155	EIF4H	84	70.233	Ficedula_albicollis
ENSODEG00000016848	-	97	76.210	ENSFDAG00000006814	-	83	79.126	Fukomys_damarensis
ENSODEG00000016848	-	84	65.366	ENSFDAG00000008915	-	83	65.049	Fukomys_damarensis
ENSODEG00000016848	-	84	56.682	ENSGMOG00000009571	eif4h	90	57.674	Gadus_morhua
ENSODEG00000016848	-	97	60.630	ENSGALG00000001313	EIF4H	99	56.574	Gallus_gallus
ENSODEG00000016848	-	83	52.427	ENSGAFG00000018555	eif4h	83	54.545	Gambusia_affinis
ENSODEG00000016848	-	80	54.167	ENSGACG00000004504	eif4h	83	56.000	Gasterosteus_aculeatus
ENSODEG00000016848	-	97	63.281	ENSGAGG00000024376	EIF4H	99	60.547	Gopherus_agassizii
ENSODEG00000016848	-	97	74.194	ENSGGOG00000005284	EIF4H	88	76.699	Gorilla_gorilla
ENSODEG00000016848	-	84	55.300	ENSHBUG00000016482	eif4h	82	57.143	Haplochromis_burtoni
ENSODEG00000016848	-	97	75.806	ENSHGLG00000014914	EIF4H	83	78.641	Heterocephalus_glaber_female
ENSODEG00000016848	-	84	59.709	ENSHGLG00000006693	-	87	59.420	Heterocephalus_glaber_female
ENSODEG00000016848	-	89	75.109	ENSHGLG00100003157	-	88	78.641	Heterocephalus_glaber_male
ENSODEG00000016848	-	84	59.709	ENSHGLG00100013834	-	87	59.420	Heterocephalus_glaber_male
ENSODEG00000016848	-	80	53.695	ENSHCOG00000006653	eif4h	80	58.537	Hippocampus_comes
ENSODEG00000016848	-	93	60.000	ENSIPUG00000020402	eif4h	80	60.396	Ictalurus_punctatus
ENSODEG00000016848	-	84	78.155	ENSSTOG00000020777	EIF4H	90	78.155	Ictidomys_tridecemlineatus
ENSODEG00000016848	-	84	49.774	ENSKMAG00000001866	eif4h	84	54.505	Kryptolebias_marmoratus
ENSODEG00000016848	-	84	55.046	ENSLACG00000018610	EIF4H	82	59.641	Latimeria_chalumnae
ENSODEG00000016848	-	84	52.995	ENSLOCG00000000875	eif4h	82	58.986	Lepisosteus_oculatus
ENSODEG00000016848	-	91	71.915	ENSLAFG00000010578	EIF4H	90	76.699	Loxodonta_africana
ENSODEG00000016848	-	97	74.597	ENSMFAG00000031975	EIF4H	88	77.184	Macaca_fascicularis
ENSODEG00000016848	-	90	61.638	ENSMFAG00000034503	-	77	63.592	Macaca_fascicularis
ENSODEG00000016848	-	97	74.597	ENSMMUG00000006205	EIF4H	88	77.184	Macaca_mulatta
ENSODEG00000016848	-	97	56.048	ENSMMUG00000016648	-	81	59.024	Macaca_mulatta
ENSODEG00000016848	-	97	74.597	ENSMNEG00000044792	-	88	77.184	Macaca_nemestrina
ENSODEG00000016848	-	90	62.069	ENSMNEG00000028910	-	77	64.078	Macaca_nemestrina
ENSODEG00000016848	-	90	73.276	ENSMLEG00000031453	-	89	77.184	Mandrillus_leucophaeus
ENSODEG00000016848	-	97	69.710	ENSMLEG00000021068	-	99	68.354	Mandrillus_leucophaeus
ENSODEG00000016848	-	80	56.650	ENSMAMG00000019170	eif4h	71	59.314	Mastacembelus_armatus
ENSODEG00000016848	-	80	57.843	ENSMZEG00005022684	eif4h	80	58.824	Maylandia_zebra
ENSODEG00000016848	-	76	49.730	ENSMZEG00005000560	-	76	48.087	Maylandia_zebra
ENSODEG00000016848	-	92	60.684	ENSMGAG00000002508	EIF4H	91	69.626	Meleagris_gallopavo
ENSODEG00000016848	-	97	42.339	ENSMAUG00000000548	Eif4h	71	35.749	Mesocricetus_auratus
ENSODEG00000016848	-	97	75.000	ENSMICG00000010204	EIF4H	83	77.670	Microcebus_murinus
ENSODEG00000016848	-	97	75.806	ENSMOCG00000003802	Eif4h	83	78.641	Microtus_ochrogaster
ENSODEG00000016848	-	78	53.158	ENSMMOG00000009312	eif4h	76	54.974	Mola_mola
ENSODEG00000016848	-	97	71.200	ENSMODG00000013851	EIF4H	54	75.481	Monodelphis_domestica
ENSODEG00000016848	-	84	56.221	ENSMALG00000000803	eif4h	82	56.881	Monopterus_albus
ENSODEG00000016848	-	97	76.210	MGP_CAROLIEiJ_G0027816	Eif4h	83	79.126	Mus_caroli
ENSODEG00000016848	-	97	76.210	ENSMUSG00000040731	Eif4h	83	79.126	Mus_musculus
ENSODEG00000016848	-	97	76.210	MGP_PahariEiJ_G0024368	Eif4h	83	79.126	Mus_pahari
ENSODEG00000016848	-	97	76.210	MGP_SPRETEiJ_G0028814	Eif4h	83	79.126	Mus_spretus
ENSODEG00000016848	-	89	71.179	ENSMPUG00000016107	EIF4H	90	74.272	Mustela_putorius_furo
ENSODEG00000016848	-	93	65.000	ENSMLUG00000009053	EIF4H	80	68.932	Myotis_lucifugus
ENSODEG00000016848	-	97	76.210	ENSNGAG00000000522	Eif4h	99	70.565	Nannospalax_galili
ENSODEG00000016848	-	80	53.302	ENSNBRG00000021071	eif4h	80	57.746	Neolamprologus_brichardi
ENSODEG00000016848	-	97	72.458	ENSNLEG00000008838	EIF4H	99	72.458	Nomascus_leucogenys
ENSODEG00000016848	-	89	70.130	ENSMEUG00000000254	EIF4H	90	75.481	Notamacropus_eugenii
ENSODEG00000016848	-	78	66.332	ENSOPRG00000003648	-	88	69.318	Ochotona_princeps
ENSODEG00000016848	-	80	53.774	ENSONIG00000001042	eif4h	80	57.746	Oreochromis_niloticus
ENSODEG00000016848	-	52	70.290	ENSOANG00000004334	EIF4H	83	76.522	Ornithorhynchus_anatinus
ENSODEG00000016848	-	93	69.262	ENSOCUG00000017685	EIF4H	83	73.113	Oryctolagus_cuniculus
ENSODEG00000016848	-	80	56.585	ENSORLG00000023059	eif4h	79	57.561	Oryzias_latipes
ENSODEG00000016848	-	80	55.897	ENSORLG00015012124	eif4h	77	54.040	Oryzias_latipes_hsok
ENSODEG00000016848	-	97	75.000	ENSOGAG00000028051	EIF4H	83	77.670	Otolemur_garnettii
ENSODEG00000016848	-	84	69.268	ENSOARG00000011868	EIF4H	81	68.932	Ovis_aries
ENSODEG00000016848	-	89	74.236	ENSPPAG00000032449	-	90	77.670	Pan_paniscus
ENSODEG00000016848	-	97	75.806	ENSPPRG00000010557	EIF4H	83	78.641	Panthera_pardus
ENSODEG00000016848	-	89	75.109	ENSPTIG00000007636	EIF4H	83	78.641	Panthera_tigris_altaica
ENSODEG00000016848	-	89	74.236	ENSPTRG00000046154	-	90	77.670	Pan_troglodytes
ENSODEG00000016848	-	97	75.000	ENSPTRG00000019287	EIF4H	83	77.670	Pan_troglodytes
ENSODEG00000016848	-	97	74.597	ENSPANG00000007491	-	87	77.184	Papio_anubis
ENSODEG00000016848	-	93	64.167	ENSPANG00000016112	-	86	69.903	Papio_anubis
ENSODEG00000016848	-	84	53.810	ENSPKIG00000015513	eif4h	82	60.563	Paramormyrops_kingsleyae
ENSODEG00000016848	-	84	53.081	ENSPKIG00000011080	eif4h	79	59.000	Paramormyrops_kingsleyae
ENSODEG00000016848	-	84	63.721	ENSPSIG00000014490	EIF4H	86	65.581	Pelodiscus_sinensis
ENSODEG00000016848	-	80	50.769	ENSPMGG00000020983	eif4h	81	53.398	Periophthalmus_magnuspinnatus
ENSODEG00000016848	-	97	76.210	ENSPEMG00000018422	Eif4h	83	79.126	Peromyscus_maniculatus_bairdii
ENSODEG00000016848	-	97	71.200	ENSPCIG00000017251	EIF4H	90	75.481	Phascolarctos_cinereus
ENSODEG00000016848	-	83	52.657	ENSPLAG00000019336	eif4h	81	59.223	Poecilia_latipinna
ENSODEG00000016848	-	83	54.502	ENSPMEG00000021959	eif4h	81	60.194	Poecilia_mexicana
ENSODEG00000016848	-	97	68.145	ENSPPYG00000017489	-	81	69.417	Pongo_abelii
ENSODEG00000016848	-	77	77.419	ENSPCAG00000013231	EIF4H	64	83.186	Procavia_capensis
ENSODEG00000016848	-	97	75.000	ENSPCOG00000024907	EIF4H	83	77.670	Propithecus_coquereli
ENSODEG00000016848	-	97	75.000	ENSPVAG00000011008	EIF4H	83	77.670	Pteropus_vampyrus
ENSODEG00000016848	-	80	51.546	ENSPNYG00000009769	eif4h	77	55.330	Pundamilia_nyererei
ENSODEG00000016848	-	93	60.082	ENSPNAG00000001813	eif4h	80	59.500	Pygocentrus_nattereri
ENSODEG00000016848	-	97	76.210	ENSRNOG00000001454	Eif4h	89	79.126	Rattus_norvegicus
ENSODEG00000016848	-	94	66.957	ENSRBIG00000041723	-	85	71.782	Rhinopithecus_bieti
ENSODEG00000016848	-	89	72.926	ENSRBIG00000014939	-	90	76.214	Rhinopithecus_bieti
ENSODEG00000016848	-	89	73.799	ENSSBOG00000019472	EIF4H	90	77.184	Saimiri_boliviensis_boliviensis
ENSODEG00000016848	-	89	70.130	ENSSHAG00000000106	EIF4H	90	75.481	Sarcophilus_harrisii
ENSODEG00000016848	-	97	47.390	ENSSFOG00015008101	eif4h	83	56.944	Scleropages_formosus
ENSODEG00000016848	-	93	54.098	ENSSFOG00015004902	eif4h	80	62.376	Scleropages_formosus
ENSODEG00000016848	-	83	47.727	ENSSMAG00000006068	-	80	51.982	Scophthalmus_maximus
ENSODEG00000016848	-	80	53.333	ENSSDUG00000006476	eif4h	80	56.744	Seriola_dumerili
ENSODEG00000016848	-	80	54.167	ENSSLDG00000000355	eif4h	81	56.221	Seriola_lalandi_dorsalis
ENSODEG00000016848	-	93	64.876	ENSSPUG00000006402	EIF4H	96	64.876	Sphenodon_punctatus
ENSODEG00000016848	-	84	55.072	ENSSPAG00000013718	eif4h	83	55.455	Stegastes_partitus
ENSODEG00000016848	-	97	75.000	ENSSSCG00000025966	EIF4H	83	77.670	Sus_scrofa
ENSODEG00000016848	-	97	58.366	ENSTGUG00000003901	EIF4H	84	69.767	Taeniopygia_guttata
ENSODEG00000016848	-	93	52.344	ENSTRUG00000010290	eif4h	82	54.955	Takifugu_rubripes
ENSODEG00000016848	-	93	45.669	ENSTNIG00000011234	eif4h	83	50.893	Tetraodon_nigroviridis
ENSODEG00000016848	-	84	76.168	ENSTBEG00000009558	EIF4H	89	80.105	Tupaia_belangeri
ENSODEG00000016848	-	60	76.129	ENSTTRG00000008737	EIF4H	72	81.416	Tursiops_truncatus
ENSODEG00000016848	-	89	66.376	ENSUMAG00000014241	EIF4H	81	68.932	Ursus_maritimus
ENSODEG00000016848	-	97	71.371	ENSVPAG00000006838	EIF4H	83	78.155	Vicugna_pacos
ENSODEG00000016848	-	89	73.799	ENSVVUG00000024843	EIF4H	71	77.184	Vulpes_vulpes
ENSODEG00000016848	-	93	55.967	ENSXETG00000018230	eif4h	78	64.179	Xenopus_tropicalis
ENSODEG00000016848	-	83	54.854	ENSXMAG00000014333	eif4h	85	61.165	Xiphophorus_maculatus