EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016878 (Gene tree)
Gene ID: 101582013
Gene Symbol: -
Alias: -
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 19390 bases
Position: chrJH651541.1:10181394-10200783
Accession: 101582013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023014	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023283	-	261	-	ENSODEP00000023015	86 (aa)	-	UPI00001F78EA
ENSODET00000023282	-	2388	XM_004628800	ENSODEP00000023014	216 (aa)	XP_004628857	UPI0000029ED1

Gene Model

Click here to download ENSODEG00000016878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016878	-	78	55.357	ENSODEG00000017847	-	84	55.357
ENSODEG00000016878	-	85	31.892	ENSODEG00000009994	RERG	90	31.892
ENSODEG00000016878	-	88	34.555	ENSODEG00000016056	RAB23	80	34.555
ENSODEG00000016878	-	91	45.685	ENSODEG00000011248	-	81	51.553
ENSODEG00000016878	-	96	42.995	ENSODEG00000007219	RAB35	99	42.512
ENSODEG00000016878	-	94	38.235	ENSODEG00000000054	RAB22A	97	38.235
ENSODEG00000016878	-	70	36.774	ENSODEG00000010412	KRAS	87	37.725
ENSODEG00000016878	-	55	43.697	ENSODEG00000009016	RAB36	55	39.130
ENSODEG00000016878	-	57	49.593	ENSODEG00000000290	-	83	49.593
ENSODEG00000016878	-	79	40.909	ENSODEG00000002979	RAB33B	76	40.909
ENSODEG00000016878	-	70	39.490	ENSODEG00000002835	RAB7A	96	39.490
ENSODEG00000016878	-	69	36.000	ENSODEG00000015703	HRAS	85	37.037
ENSODEG00000016878	-	75	42.683	ENSODEG00000019065	-	87	42.683
ENSODEG00000016878	-	79	55.556	ENSODEG00000001343	RAB2B	79	55.556
ENSODEG00000016878	-	79	54.971	ENSODEG00000002369	-	81	54.971
ENSODEG00000016878	-	80	46.857	ENSODEG00000000520	RAB39B	82	46.857
ENSODEG00000016878	-	74	33.125	ENSODEG00000009963	RHEB	86	33.125
ENSODEG00000016878	-	94	41.748	ENSODEG00000017920	RAB5C	90	41.748
ENSODEG00000016878	-	94	37.500	ENSODEG00000019004	RAB9A	97	37.500
ENSODEG00000016878	-	63	37.956	ENSODEG00000012270	RAB34	51	37.956
ENSODEG00000016878	-	70	37.419	ENSODEG00000007937	NRAS	87	38.323
ENSODEG00000016878	-	81	39.665	ENSODEG00000011726	RAB33A	74	39.665
ENSODEG00000016878	-	75	47.205	ENSODEG00000003860	RAB5B	75	47.205
ENSODEG00000016878	-	100	91.284	ENSODEG00000011371	RAB11B	100	91.284
ENSODEG00000016878	-	98	62.736	ENSODEG00000009908	RAB25	97	62.736
ENSODEG00000016878	-	96	37.981	ENSODEG00000003833	RAB30	97	37.981
ENSODEG00000016878	-	99	45.540	ENSODEG00000002013	RAB14	99	45.540
ENSODEG00000016878	-	84	30.481	ENSODEG00000010425	RAB24	92	31.551
ENSODEG00000016878	-	74	30.303	ENSODEG00000007488	DNAJC27	60	30.303
ENSODEG00000016878	-	75	47.531	ENSODEG00000004150	-	78	47.531
ENSODEG00000016878	-	71	37.419	ENSODEG00000015650	-	67	37.419
ENSODEG00000016878	-	93	48.020	ENSODEG00000016788	-	98	48.020
ENSODEG00000016878	-	94	35.407	ENSODEG00000002594	-	71	35.407
ENSODEG00000016878	-	82	35.955	ENSODEG00000005942	RAB6A	84	35.955
ENSODEG00000016878	-	77	41.916	ENSODEG00000006414	RAB12	94	37.799
ENSODEG00000016878	-	83	44.134	ENSODEG00000013827	RAB15	93	40.887
ENSODEG00000016878	-	72	31.013	ENSODEG00000018151	MRAS	85	31.461
ENSODEG00000016878	-	81	46.023	ENSODEG00000010443	-	87	46.023
ENSODEG00000016878	-	56	52.066	ENSODEG00000012634	-	95	52.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016878	-	100	100.000	ENSG00000103769	RAB11A	100	100.000	Homo_sapiens
ENSODEG00000016878	-	100	94.907	ENSAPOG00000018256	rab11a	100	94.907	Acanthochromis_polyacanthus
ENSODEG00000016878	-	100	100.000	ENSAMEG00000003119	RAB11A	84	100.000	Ailuropoda_melanoleuca
ENSODEG00000016878	-	100	94.907	ENSACIG00000003092	rab11a	100	94.907	Amphilophus_citrinellus
ENSODEG00000016878	-	100	94.907	ENSAOCG00000020106	rab11a	100	94.907	Amphiprion_ocellaris
ENSODEG00000016878	-	100	94.907	ENSAPEG00000000075	rab11a	100	94.907	Amphiprion_percula
ENSODEG00000016878	-	100	94.907	ENSATEG00000022531	rab11a	100	94.907	Anabas_testudineus
ENSODEG00000016878	-	98	96.698	ENSAPLG00000014962	RAB11A	98	96.698	Anas_platyrhynchos
ENSODEG00000016878	-	99	99.070	ENSACAG00000004479	RAB11A	99	99.070	Anolis_carolinensis
ENSODEG00000016878	-	100	100.000	ENSANAG00000008429	RAB11A	100	100.000	Aotus_nancymaae
ENSODEG00000016878	-	100	94.907	ENSACLG00000001775	rab11a	100	94.907	Astatotilapia_calliptera
ENSODEG00000016878	-	96	93.780	ENSAMXG00000003155	rab11a	97	93.780	Astyanax_mexicanus
ENSODEG00000016878	-	100	100.000	ENSBTAG00000018959	RAB11A	100	100.000	Bos_taurus
ENSODEG00000016878	-	99	79.439	ENSBTAG00000048711	-	97	79.310	Bos_taurus
ENSODEG00000016878	-	100	100.000	ENSCJAG00000042037	RAB11A	100	100.000	Callithrix_jacchus
ENSODEG00000016878	-	100	100.000	ENSCAFG00000017255	RAB11A	100	100.000	Canis_familiaris
ENSODEG00000016878	-	100	100.000	ENSCAFG00020008478	RAB11A	100	100.000	Canis_lupus_dingo
ENSODEG00000016878	-	100	100.000	ENSCHIG00000012183	-	100	100.000	Capra_hircus
ENSODEG00000016878	-	100	96.296	ENSTSYG00000031189	RAB11A	100	96.296	Carlito_syrichta
ENSODEG00000016878	-	100	100.000	ENSCPOG00000037599	RAB11A	100	100.000	Cavia_porcellus
ENSODEG00000016878	-	100	100.000	ENSCCAG00000021286	RAB11A	100	100.000	Cebus_capucinus
ENSODEG00000016878	-	100	100.000	ENSCATG00000034739	-	100	100.000	Cercocebus_atys
ENSODEG00000016878	-	100	100.000	ENSCLAG00000007435	RAB11A	100	100.000	Chinchilla_lanigera
ENSODEG00000016878	-	100	100.000	ENSCSAG00000013038	RAB11A	100	100.000	Chlorocebus_sabaeus
ENSODEG00000016878	-	100	99.537	ENSCPBG00000014614	RAB11A	100	99.537	Chrysemys_picta_bellii
ENSODEG00000016878	-	100	100.000	ENSCANG00000034570	-	100	100.000	Colobus_angolensis_palliatus
ENSODEG00000016878	-	100	100.000	ENSCGRG00001023313	Rab11a	100	100.000	Cricetulus_griseus_chok1gshd
ENSODEG00000016878	-	100	100.000	ENSCGRG00000018359	Rab11a	100	100.000	Cricetulus_griseus_crigri
ENSODEG00000016878	-	100	94.444	ENSCSEG00000007383	rab11a	100	94.444	Cynoglossus_semilaevis
ENSODEG00000016878	-	100	94.907	ENSCVAG00000013878	rab11a	100	94.907	Cyprinodon_variegatus
ENSODEG00000016878	-	100	95.370	ENSDARG00000041450	rab11a	100	95.370	Danio_rerio
ENSODEG00000016878	-	100	100.000	ENSDNOG00000038479	RAB11A	83	100.000	Dasypus_novemcinctus
ENSODEG00000016878	-	99	85.514	FBgn0015790	Rab11	100	85.514	Drosophila_melanogaster
ENSODEG00000016878	-	100	93.981	ENSETEG00000004920	RAB11A	99	93.981	Echinops_telfairi
ENSODEG00000016878	-	100	88.018	ENSEBUG00000007493	rab11a	100	88.018	Eptatretus_burgeri
ENSODEG00000016878	-	100	100.000	ENSEASG00005006431	RAB11A	100	100.000	Equus_asinus_asinus
ENSODEG00000016878	-	100	100.000	ENSECAG00000023865	RAB11A	88	98.500	Equus_caballus
ENSODEG00000016878	-	100	95.370	ENSELUG00000002999	rab11a	100	95.370	Esox_lucius
ENSODEG00000016878	-	100	100.000	ENSFCAG00000030174	RAB11A	100	100.000	Felis_catus
ENSODEG00000016878	-	97	97.129	ENSFALG00000010052	RAB11A	100	97.129	Ficedula_albicollis
ENSODEG00000016878	-	96	100.000	ENSFDAG00000021495	RAB11A	96	100.000	Fukomys_damarensis
ENSODEG00000016878	-	100	94.907	ENSFHEG00000019668	rab11a	100	94.907	Fundulus_heteroclitus
ENSODEG00000016878	-	100	92.760	ENSGMOG00000004096	-	100	92.760	Gadus_morhua
ENSODEG00000016878	-	100	93.056	ENSGMOG00000008355	rab11a	99	93.056	Gadus_morhua
ENSODEG00000016878	-	100	99.074	ENSGALG00000007615	RAB11A	100	99.074	Gallus_gallus
ENSODEG00000016878	-	100	94.907	ENSGAFG00000016549	rab11a	100	94.907	Gambusia_affinis
ENSODEG00000016878	-	100	99.537	ENSGAGG00000014814	RAB11A	100	99.537	Gopherus_agassizii
ENSODEG00000016878	-	100	100.000	ENSGGOG00000014252	RAB11A	100	100.000	Gorilla_gorilla
ENSODEG00000016878	-	94	94.089	ENSHBUG00000023035	rab11a	88	94.089	Haplochromis_burtoni
ENSODEG00000016878	-	94	86.700	ENSHGLG00000006346	-	99	86.700	Heterocephalus_glaber_female
ENSODEG00000016878	-	100	100.000	ENSHGLG00000005396	RAB11A	100	100.000	Heterocephalus_glaber_female
ENSODEG00000016878	-	100	100.000	ENSHGLG00100011237	RAB11A	100	100.000	Heterocephalus_glaber_male
ENSODEG00000016878	-	94	86.700	ENSHGLG00100015502	-	99	86.700	Heterocephalus_glaber_male
ENSODEG00000016878	-	100	94.907	ENSHCOG00000005652	rab11a	100	94.907	Hippocampus_comes
ENSODEG00000016878	-	100	95.370	ENSIPUG00000021401	Rab11a	100	95.370	Ictalurus_punctatus
ENSODEG00000016878	-	100	100.000	ENSSTOG00000015255	RAB11A	100	100.000	Ictidomys_tridecemlineatus
ENSODEG00000016878	-	100	100.000	ENSJJAG00000012036	-	100	100.000	Jaculus_jaculus
ENSODEG00000016878	-	100	100.000	ENSJJAG00000015445	Rab11a	100	100.000	Jaculus_jaculus
ENSODEG00000016878	-	100	94.907	ENSKMAG00000011905	rab11a	100	94.907	Kryptolebias_marmoratus
ENSODEG00000016878	-	100	94.907	ENSLBEG00000026857	rab11a	100	94.907	Labrus_bergylta
ENSODEG00000016878	-	100	95.833	ENSLACG00000012184	RAB11A	100	95.833	Latimeria_chalumnae
ENSODEG00000016878	-	100	96.759	ENSLOCG00000013835	rab11a	99	96.759	Lepisosteus_oculatus
ENSODEG00000016878	-	100	100.000	ENSLAFG00000011418	RAB11A	100	100.000	Loxodonta_africana
ENSODEG00000016878	-	100	100.000	ENSMFAG00000000699	-	100	100.000	Macaca_fascicularis
ENSODEG00000016878	-	100	100.000	ENSMMUG00000008006	RAB11A	100	100.000	Macaca_mulatta
ENSODEG00000016878	-	100	100.000	ENSMNEG00000043040	-	100	100.000	Macaca_nemestrina
ENSODEG00000016878	-	100	91.667	ENSMLEG00000032505	RAB11A	94	100.000	Mandrillus_leucophaeus
ENSODEG00000016878	-	100	94.907	ENSMAMG00000017327	rab11a	100	94.907	Mastacembelus_armatus
ENSODEG00000016878	-	100	94.907	ENSMZEG00005017063	rab11a	100	94.907	Maylandia_zebra
ENSODEG00000016878	-	96	97.585	ENSMGAG00000009797	RAB11A	100	97.585	Meleagris_gallopavo
ENSODEG00000016878	-	100	100.000	ENSMAUG00000018551	Rab11a	100	100.000	Mesocricetus_auratus
ENSODEG00000016878	-	100	100.000	ENSMICG00000041504	RAB11A	100	100.000	Microcebus_murinus
ENSODEG00000016878	-	100	100.000	ENSMOCG00000021138	Rab11a	100	100.000	Microtus_ochrogaster
ENSODEG00000016878	-	92	93.939	ENSMMOG00000017423	-	93	99.174	Mola_mola
ENSODEG00000016878	-	100	100.000	ENSMODG00000009810	RAB11A	100	100.000	Monodelphis_domestica
ENSODEG00000016878	-	100	94.907	ENSMALG00000003050	rab11a	100	94.907	Monopterus_albus
ENSODEG00000016878	-	100	100.000	MGP_CAROLIEiJ_G0032346	Rab11a	100	100.000	Mus_caroli
ENSODEG00000016878	-	100	100.000	ENSMUSG00000004771	Rab11a	100	100.000	Mus_musculus
ENSODEG00000016878	-	100	100.000	MGP_PahariEiJ_G0015211	Rab11a	100	100.000	Mus_pahari
ENSODEG00000016878	-	100	100.000	MGP_SPRETEiJ_G0033485	Rab11a	100	100.000	Mus_spretus
ENSODEG00000016878	-	100	100.000	ENSMPUG00000000387	RAB11A	100	100.000	Mustela_putorius_furo
ENSODEG00000016878	-	100	100.000	ENSMLUG00000008820	RAB11A	83	100.000	Myotis_lucifugus
ENSODEG00000016878	-	100	100.000	ENSNGAG00000013726	Rab11a	100	100.000	Nannospalax_galili
ENSODEG00000016878	-	100	94.907	ENSNBRG00000012893	rab11a	100	94.907	Neolamprologus_brichardi
ENSODEG00000016878	-	98	97.170	ENSNLEG00000012853	-	98	97.170	Nomascus_leucogenys
ENSODEG00000016878	-	100	97.222	ENSOPRG00000004681	RAB11A	100	97.222	Ochotona_princeps
ENSODEG00000016878	-	100	94.907	ENSONIG00000015072	RAB11A	100	94.907	Oreochromis_niloticus
ENSODEG00000016878	-	94	100.000	ENSOANG00000002201	RAB11A	90	100.000	Ornithorhynchus_anatinus
ENSODEG00000016878	-	100	100.000	ENSOCUG00000014755	RAB11A	100	100.000	Oryctolagus_cuniculus
ENSODEG00000016878	-	100	95.370	ENSORLG00000018331	RAB11A	100	95.370	Oryzias_latipes
ENSODEG00000016878	-	100	95.370	ENSORLG00015010257	rab11a	100	95.370	Oryzias_latipes_hsok
ENSODEG00000016878	-	100	95.370	ENSOMEG00000017467	rab11a	100	95.370	Oryzias_melastigma
ENSODEG00000016878	-	100	100.000	ENSOGAG00000007642	RAB11A	100	100.000	Otolemur_garnettii
ENSODEG00000016878	-	100	100.000	ENSOARG00000018084	RAB11A	83	100.000	Ovis_aries
ENSODEG00000016878	-	100	100.000	ENSPPAG00000030195	-	100	100.000	Pan_paniscus
ENSODEG00000016878	-	100	100.000	ENSPPRG00000010471	RAB11A	100	100.000	Panthera_pardus
ENSODEG00000016878	-	100	100.000	ENSPTIG00000021637	RAB11A	100	100.000	Panthera_tigris_altaica
ENSODEG00000016878	-	100	100.000	ENSPTRG00000044358	-	100	100.000	Pan_troglodytes
ENSODEG00000016878	-	100	100.000	ENSPANG00000016687	-	100	100.000	Papio_anubis
ENSODEG00000016878	-	100	94.907	ENSPKIG00000007606	rab11a	100	94.907	Paramormyrops_kingsleyae
ENSODEG00000016878	-	100	96.296	ENSPKIG00000015102	-	100	96.296	Paramormyrops_kingsleyae
ENSODEG00000016878	-	97	97.143	ENSPSIG00000011930	RAB11A	97	97.143	Pelodiscus_sinensis
ENSODEG00000016878	-	100	100.000	ENSPEMG00000021125	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSODEG00000016878	-	94	99.510	ENSPEMG00000005147	-	98	99.510	Peromyscus_maniculatus_bairdii
ENSODEG00000016878	-	97	100.000	ENSPCIG00000006878	RAB11A	93	100.000	Phascolarctos_cinereus
ENSODEG00000016878	-	100	94.907	ENSPFOG00000009284	rab11a	100	94.907	Poecilia_formosa
ENSODEG00000016878	-	100	94.907	ENSPLAG00000011175	rab11a	100	94.907	Poecilia_latipinna
ENSODEG00000016878	-	100	94.907	ENSPMEG00000007932	rab11a	100	94.907	Poecilia_mexicana
ENSODEG00000016878	-	100	94.907	ENSPREG00000009605	rab11a	100	94.907	Poecilia_reticulata
ENSODEG00000016878	-	100	100.000	ENSPPYG00000006573	RAB11A	100	100.000	Pongo_abelii
ENSODEG00000016878	-	100	99.537	ENSPCAG00000002640	RAB11A	100	99.537	Procavia_capensis
ENSODEG00000016878	-	100	99.537	ENSPCOG00000015802	-	100	99.537	Propithecus_coquereli
ENSODEG00000016878	-	100	95.833	ENSPCOG00000016536	-	100	95.833	Propithecus_coquereli
ENSODEG00000016878	-	100	94.907	ENSPNYG00000002252	rab11a	100	94.907	Pundamilia_nyererei
ENSODEG00000016878	-	100	95.370	ENSPNAG00000014863	rab11a	100	95.370	Pygocentrus_nattereri
ENSODEG00000016878	-	100	100.000	ENSRNOG00000011302	Rab11a	100	100.000	Rattus_norvegicus
ENSODEG00000016878	-	100	100.000	ENSRBIG00000035649	RAB11A	100	100.000	Rhinopithecus_bieti
ENSODEG00000016878	-	100	100.000	ENSRROG00000035305	RAB11A	100	100.000	Rhinopithecus_roxellana
ENSODEG00000016878	-	100	100.000	ENSSBOG00000017326	RAB11A	100	100.000	Saimiri_boliviensis_boliviensis
ENSODEG00000016878	-	97	97.129	ENSSHAG00000006622	RAB11A	97	97.129	Sarcophilus_harrisii
ENSODEG00000016878	-	100	93.981	ENSSFOG00015024042	rab11a	100	93.981	Scleropages_formosus
ENSODEG00000016878	-	100	94.907	ENSSMAG00000004133	rab11a	100	94.907	Scophthalmus_maximus
ENSODEG00000016878	-	100	94.907	ENSSDUG00000002580	rab11a	100	94.907	Seriola_dumerili
ENSODEG00000016878	-	100	94.907	ENSSLDG00000009438	rab11a	100	94.907	Seriola_lalandi_dorsalis
ENSODEG00000016878	-	94	99.507	ENSSPUG00000013698	RAB11A	100	99.507	Sphenodon_punctatus
ENSODEG00000016878	-	81	95.455	ENSSPAG00000019393	RAB11A	87	95.455	Stegastes_partitus
ENSODEG00000016878	-	100	100.000	ENSSSCG00000032312	RAB11A	100	100.000	Sus_scrofa
ENSODEG00000016878	-	100	99.074	ENSTGUG00000009279	RAB11A	100	99.074	Taeniopygia_guttata
ENSODEG00000016878	-	100	94.907	ENSTRUG00000020792	rab11a	100	94.907	Takifugu_rubripes
ENSODEG00000016878	-	99	98.140	ENSTTRG00000011885	RAB11A	100	98.140	Tursiops_truncatus
ENSODEG00000016878	-	95	98.544	ENSUAMG00000026548	RAB11A	98	98.544	Ursus_americanus
ENSODEG00000016878	-	100	100.000	ENSUMAG00000012273	RAB11A	100	100.000	Ursus_maritimus
ENSODEG00000016878	-	94	100.000	ENSVPAG00000004556	RAB11A	100	100.000	Vicugna_pacos
ENSODEG00000016878	-	100	100.000	ENSVVUG00000014435	RAB11A	100	100.000	Vulpes_vulpes
ENSODEG00000016878	-	100	98.148	ENSXETG00000006639	rab11a	100	98.148	Xenopus_tropicalis
ENSODEG00000016878	-	100	94.907	ENSXCOG00000001357	rab11a	82	94.907	Xiphophorus_couchianus
ENSODEG00000016878	-	100	94.907	ENSXMAG00000023732	rab11a	82	94.907	Xiphophorus_maculatus