EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000016880 (Gene tree)
Gene ID: 101566737
Gene Symbol: -
Alias: -
Full Name: exosome component 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 9273 bases
Position: chrJH651638.1:5340899-5350171
Accession: 101566737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023019	ECR1_N	PF14382.6	2.6e-15	1	1
ENSODEP00000023018	ECR1_N	PF14382.6	3.3e-15	1	1
ENSODEP00000023017	ECR1_N	PF14382.6	3.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023285	-	870	-	ENSODEP00000023017	289 (aa)	-	-
ENSODET00000023287	-	726	XM_012516755	ENSODEP00000023019	242 (aa)	-	-
ENSODET00000023286	-	867	XM_004640449	ENSODEP00000023018	288 (aa)	XP_004640506	-

Gene Model

Click here to download ENSODEG00000016880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000016880	-	86	96.457	ENSODEG00000019513	-	100	96.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016880	-	100	93.174	ENSG00000130713	EXOSC2	100	93.174	Homo_sapiens
ENSODEG00000016880	-	95	73.118	ENSAPOG00000008861	exosc2	97	76.604	Acanthochromis_polyacanthus
ENSODEG00000016880	-	100	92.491	ENSAMEG00000016239	EXOSC2	100	92.491	Ailuropoda_melanoleuca
ENSODEG00000016880	-	100	75.768	ENSACIG00000019054	exosc2	100	75.768	Amphilophus_citrinellus
ENSODEG00000016880	-	100	76.792	ENSAOCG00000004983	exosc2	100	76.792	Amphiprion_ocellaris
ENSODEG00000016880	-	100	76.792	ENSAOCG00000008577	exosc2	100	76.792	Amphiprion_ocellaris
ENSODEG00000016880	-	100	76.792	ENSAPEG00000014088	exosc2	100	76.792	Amphiprion_percula
ENSODEG00000016880	-	100	76.792	ENSATEG00000018680	exosc2	100	76.792	Anabas_testudineus
ENSODEG00000016880	-	96	85.461	ENSAPLG00000012516	EXOSC2	97	85.461	Anas_platyrhynchos
ENSODEG00000016880	-	99	83.562	ENSACAG00000002706	EXOSC2	99	83.562	Anolis_carolinensis
ENSODEG00000016880	-	100	75.427	ENSACLG00000013613	exosc2	100	75.427	Astatotilapia_calliptera
ENSODEG00000016880	-	100	78.644	ENSAMXG00000042605	exosc2	100	78.644	Astyanax_mexicanus
ENSODEG00000016880	-	100	92.491	ENSBTAG00000048071	EXOSC2	100	92.491	Bos_taurus
ENSODEG00000016880	-	99	40.940	WBGene00022232	exos-2	98	40.940	Caenorhabditis_elegans
ENSODEG00000016880	-	100	93.174	ENSCJAG00000020537	EXOSC2	100	93.174	Callithrix_jacchus
ENSODEG00000016880	-	99	92.123	ENSCAFG00000019941	EXOSC2	99	92.123	Canis_familiaris
ENSODEG00000016880	-	100	92.150	ENSCAFG00020024047	EXOSC2	100	92.150	Canis_lupus_dingo
ENSODEG00000016880	-	100	92.491	ENSCHIG00000021398	EXOSC2	100	92.491	Capra_hircus
ENSODEG00000016880	-	100	92.150	ENSTSYG00000001805	EXOSC2	100	92.150	Carlito_syrichta
ENSODEG00000016880	-	100	91.468	ENSCPOG00000005902	EXOSC2	100	91.468	Cavia_porcellus
ENSODEG00000016880	-	100	93.174	ENSCCAG00000019749	EXOSC2	100	93.174	Cebus_capucinus
ENSODEG00000016880	-	100	93.857	ENSCATG00000025389	-	100	93.857	Cercocebus_atys
ENSODEG00000016880	-	100	95.563	ENSCLAG00000006195	EXOSC2	100	95.563	Chinchilla_lanigera
ENSODEG00000016880	-	100	93.857	ENSCSAG00000014760	EXOSC2	100	93.857	Chlorocebus_sabaeus
ENSODEG00000016880	-	100	91.468	ENSCHOG00000000858	EXOSC2	100	91.468	Choloepus_hoffmanni
ENSODEG00000016880	-	99	84.932	ENSCPBG00000022626	EXOSC2	99	84.932	Chrysemys_picta_bellii
ENSODEG00000016880	-	96	59.233	ENSCING00000014934	-	94	59.233	Ciona_intestinalis
ENSODEG00000016880	-	92	61.232	ENSCSAVG00000003684	-	100	61.232	Ciona_savignyi
ENSODEG00000016880	-	99	85.616	ENSCANG00000029298	-	99	85.616	Colobus_angolensis_palliatus
ENSODEG00000016880	-	100	93.857	ENSCANG00000039828	-	100	93.857	Colobus_angolensis_palliatus
ENSODEG00000016880	-	100	93.515	ENSCGRG00001013981	Exosc2	100	93.515	Cricetulus_griseus_chok1gshd
ENSODEG00000016880	-	100	93.515	ENSCGRG00000017629	Exosc2	100	93.515	Cricetulus_griseus_crigri
ENSODEG00000016880	-	100	75.768	ENSCSEG00000016539	exosc2	100	75.768	Cynoglossus_semilaevis
ENSODEG00000016880	-	100	74.744	ENSCVAG00000022260	exosc2	100	74.744	Cyprinodon_variegatus
ENSODEG00000016880	-	100	76.610	ENSDARG00000028688	exosc2	100	76.610	Danio_rerio
ENSODEG00000016880	-	91	92.509	ENSDNOG00000025767	-	100	92.509	Dasypus_novemcinctus
ENSODEG00000016880	-	100	92.150	ENSDORG00000009238	Exosc2	100	92.150	Dipodomys_ordii
ENSODEG00000016880	-	89	58.779	FBgn0034879	Rrp4	91	57.407	Drosophila_melanogaster
ENSODEG00000016880	-	94	76.087	ENSETEG00000016130	-	99	76.087	Echinops_telfairi
ENSODEG00000016880	-	100	93.515	ENSEASG00005008475	EXOSC2	86	93.515	Equus_asinus_asinus
ENSODEG00000016880	-	100	93.515	ENSECAG00000007897	EXOSC2	86	93.515	Equus_caballus
ENSODEG00000016880	-	100	77.627	ENSELUG00000013641	exosc2	100	77.627	Esox_lucius
ENSODEG00000016880	-	100	92.833	ENSFCAG00000025936	EXOSC2	100	92.833	Felis_catus
ENSODEG00000016880	-	98	82.230	ENSFALG00000001446	EXOSC2	98	82.230	Ficedula_albicollis
ENSODEG00000016880	-	100	93.515	ENSFDAG00000017196	EXOSC2	100	93.515	Fukomys_damarensis
ENSODEG00000016880	-	100	75.427	ENSFHEG00000018571	exosc2	100	75.427	Fundulus_heteroclitus
ENSODEG00000016880	-	100	72.355	ENSGMOG00000011785	exosc2	99	72.355	Gadus_morhua
ENSODEG00000016880	-	99	84.589	ENSGALG00000040373	EXOSC2	99	84.589	Gallus_gallus
ENSODEG00000016880	-	99	74.315	ENSGAFG00000010283	exosc2	99	74.315	Gambusia_affinis
ENSODEG00000016880	-	100	74.744	ENSGACG00000016805	exosc2	99	74.744	Gasterosteus_aculeatus
ENSODEG00000016880	-	87	87.843	ENSGAGG00000021026	EXOSC2	96	87.843	Gopherus_agassizii
ENSODEG00000016880	-	100	92.491	ENSGGOG00000010578	EXOSC2	100	92.491	Gorilla_gorilla
ENSODEG00000016880	-	100	75.768	ENSHBUG00000022437	exosc2	100	75.768	Haplochromis_burtoni
ENSODEG00000016880	-	100	95.222	ENSHGLG00000012834	EXOSC2	100	95.222	Heterocephalus_glaber_female
ENSODEG00000016880	-	100	95.222	ENSHGLG00100007092	EXOSC2	100	95.222	Heterocephalus_glaber_male
ENSODEG00000016880	-	100	74.403	ENSHCOG00000019130	exosc2	100	74.403	Hippocampus_comes
ENSODEG00000016880	-	100	77.211	ENSIPUG00000015397	exosc2	100	77.211	Ictalurus_punctatus
ENSODEG00000016880	-	100	94.198	ENSSTOG00000005999	EXOSC2	100	94.198	Ictidomys_tridecemlineatus
ENSODEG00000016880	-	100	93.857	ENSJJAG00000003188	Exosc2	100	93.857	Jaculus_jaculus
ENSODEG00000016880	-	99	76.027	ENSKMAG00000017397	exosc2	99	76.027	Kryptolebias_marmoratus
ENSODEG00000016880	-	100	74.744	ENSLBEG00000019269	exosc2	100	74.744	Labrus_bergylta
ENSODEG00000016880	-	100	80.272	ENSLACG00000015530	EXOSC2	100	80.272	Latimeria_chalumnae
ENSODEG00000016880	-	100	92.177	ENSLAFG00000006984	EXOSC2	100	92.177	Loxodonta_africana
ENSODEG00000016880	-	100	93.857	ENSMFAG00000000597	-	100	93.857	Macaca_fascicularis
ENSODEG00000016880	-	100	79.863	ENSMFAG00000034160	-	84	79.863	Macaca_fascicularis
ENSODEG00000016880	-	100	93.117	ENSMMUG00000012498	EXOSC2	100	90.785	Macaca_mulatta
ENSODEG00000016880	-	100	80.546	ENSMNEG00000028704	-	91	80.546	Macaca_nemestrina
ENSODEG00000016880	-	100	93.857	ENSMNEG00000031861	-	100	93.857	Macaca_nemestrina
ENSODEG00000016880	-	100	79.181	ENSMLEG00000029891	-	91	79.181	Mandrillus_leucophaeus
ENSODEG00000016880	-	100	93.857	ENSMLEG00000042587	-	100	93.857	Mandrillus_leucophaeus
ENSODEG00000016880	-	100	76.109	ENSMAMG00000012466	exosc2	100	76.109	Mastacembelus_armatus
ENSODEG00000016880	-	100	75.085	ENSMZEG00005018737	exosc2	100	75.085	Maylandia_zebra
ENSODEG00000016880	-	99	83.904	ENSMGAG00000005450	EXOSC2	99	83.904	Meleagris_gallopavo
ENSODEG00000016880	-	100	93.174	ENSMAUG00000008299	Exosc2	100	93.174	Mesocricetus_auratus
ENSODEG00000016880	-	100	93.174	ENSMICG00000015495	EXOSC2	100	93.174	Microcebus_murinus
ENSODEG00000016880	-	100	93.857	ENSMOCG00000008262	Exosc2	100	93.857	Microtus_ochrogaster
ENSODEG00000016880	-	100	76.451	ENSMMOG00000009616	exosc2	100	76.451	Mola_mola
ENSODEG00000016880	-	100	88.396	ENSMODG00000012114	EXOSC2	100	88.396	Monodelphis_domestica
ENSODEG00000016880	-	100	76.451	ENSMALG00000022132	exosc2	100	76.451	Monopterus_albus
ENSODEG00000016880	-	100	92.833	MGP_CAROLIEiJ_G0023415	Exosc2	100	92.833	Mus_caroli
ENSODEG00000016880	-	100	92.833	ENSMUSG00000039356	Exosc2	100	92.833	Mus_musculus
ENSODEG00000016880	-	100	92.491	MGP_PahariEiJ_G0024872	Exosc2	100	92.491	Mus_pahari
ENSODEG00000016880	-	100	92.833	MGP_SPRETEiJ_G0024332	Exosc2	100	92.833	Mus_spretus
ENSODEG00000016880	-	100	92.150	ENSMPUG00000012686	EXOSC2	100	92.150	Mustela_putorius_furo
ENSODEG00000016880	-	100	93.220	ENSMLUG00000008776	EXOSC2	100	93.220	Myotis_lucifugus
ENSODEG00000016880	-	100	93.515	ENSNGAG00000019383	Exosc2	100	93.515	Nannospalax_galili
ENSODEG00000016880	-	100	75.427	ENSNBRG00000005453	exosc2	100	75.427	Neolamprologus_brichardi
ENSODEG00000016880	-	100	93.174	ENSNLEG00000012533	EXOSC2	100	93.174	Nomascus_leucogenys
ENSODEG00000016880	-	100	70.648	ENSMEUG00000000795	EXOSC2	100	70.648	Notamacropus_eugenii
ENSODEG00000016880	-	65	92.727	ENSOPRG00000008688	EXOSC2	65	92.727	Ochotona_princeps
ENSODEG00000016880	-	100	75.427	ENSONIG00000014086	exosc2	100	75.427	Oreochromis_niloticus
ENSODEG00000016880	-	100	83.276	ENSOANG00000001044	EXOSC2	100	83.276	Ornithorhynchus_anatinus
ENSODEG00000016880	-	100	92.833	ENSOCUG00000007138	EXOSC2	100	92.833	Oryctolagus_cuniculus
ENSODEG00000016880	-	100	75.768	ENSORLG00000007443	exosc2	100	75.768	Oryzias_latipes
ENSODEG00000016880	-	100	75.427	ENSORLG00020018902	exosc2	100	75.427	Oryzias_latipes_hni
ENSODEG00000016880	-	100	75.768	ENSORLG00015006767	exosc2	100	75.768	Oryzias_latipes_hsok
ENSODEG00000016880	-	100	74.744	ENSOMEG00000003533	exosc2	100	74.744	Oryzias_melastigma
ENSODEG00000016880	-	100	92.833	ENSOGAG00000007558	EXOSC2	100	92.833	Otolemur_garnettii
ENSODEG00000016880	-	100	91.525	ENSOARG00000007438	EXOSC2	100	91.525	Ovis_aries
ENSODEG00000016880	-	100	93.174	ENSPPAG00000034796	EXOSC2	100	93.174	Pan_paniscus
ENSODEG00000016880	-	100	93.174	ENSPPRG00000001089	EXOSC2	100	93.174	Panthera_pardus
ENSODEG00000016880	-	100	93.174	ENSPTIG00000021163	EXOSC2	100	93.174	Panthera_tigris_altaica
ENSODEG00000016880	-	100	93.174	ENSPTRG00000045766	-	100	93.174	Pan_troglodytes
ENSODEG00000016880	-	100	93.174	ENSPTRG00000021476	EXOSC2	100	93.174	Pan_troglodytes
ENSODEG00000016880	-	100	93.857	ENSPANG00000025966	EXOSC2	100	93.857	Papio_anubis
ENSODEG00000016880	-	99	77.509	ENSPKIG00000004271	exosc2	98	77.509	Paramormyrops_kingsleyae
ENSODEG00000016880	-	99	85.616	ENSPSIG00000006743	EXOSC2	99	85.616	Pelodiscus_sinensis
ENSODEG00000016880	-	86	77.866	ENSPMGG00000010980	exosc2	99	77.866	Periophthalmus_magnuspinnatus
ENSODEG00000016880	-	100	93.174	ENSPEMG00000006345	Exosc2	100	93.174	Peromyscus_maniculatus_bairdii
ENSODEG00000016880	-	100	75.932	ENSPMAG00000001280	exosc2	100	75.932	Petromyzon_marinus
ENSODEG00000016880	-	100	88.737	ENSPCIG00000024122	EXOSC2	97	88.737	Phascolarctos_cinereus
ENSODEG00000016880	-	99	74.744	ENSPFOG00000019819	exosc2	99	74.744	Poecilia_formosa
ENSODEG00000016880	-	99	75.000	ENSPLAG00000004605	exosc2	99	75.000	Poecilia_latipinna
ENSODEG00000016880	-	99	75.000	ENSPMEG00000010976	exosc2	99	75.000	Poecilia_mexicana
ENSODEG00000016880	-	99	74.658	ENSPREG00000014306	exosc2	99	74.658	Poecilia_reticulata
ENSODEG00000016880	-	100	92.833	ENSPPYG00000019695	EXOSC2	100	92.833	Pongo_abelii
ENSODEG00000016880	-	100	91.809	ENSPCAG00000013400	EXOSC2	100	91.809	Procavia_capensis
ENSODEG00000016880	-	100	92.833	ENSPCOG00000017639	EXOSC2	100	92.833	Propithecus_coquereli
ENSODEG00000016880	-	100	91.126	ENSPVAG00000001513	EXOSC2	100	91.126	Pteropus_vampyrus
ENSODEG00000016880	-	100	75.768	ENSPNYG00000007383	exosc2	100	75.768	Pundamilia_nyererei
ENSODEG00000016880	-	100	77.891	ENSPNAG00000014281	exosc2	100	77.891	Pygocentrus_nattereri
ENSODEG00000016880	-	100	92.491	ENSRNOG00000009245	Exosc2	100	92.491	Rattus_norvegicus
ENSODEG00000016880	-	100	93.515	ENSRBIG00000031203	-	100	93.515	Rhinopithecus_bieti
ENSODEG00000016880	-	99	85.959	ENSRBIG00000029791	-	99	85.959	Rhinopithecus_bieti
ENSODEG00000016880	-	99	85.366	ENSRROG00000043609	-	99	85.366	Rhinopithecus_roxellana
ENSODEG00000016880	-	100	93.515	ENSRROG00000010827	-	100	93.515	Rhinopithecus_roxellana
ENSODEG00000016880	-	89	39.527	YHR069C	-	82	39.527	Saccharomyces_cerevisiae
ENSODEG00000016880	-	100	92.833	ENSSBOG00000022712	EXOSC2	100	92.833	Saimiri_boliviensis_boliviensis
ENSODEG00000016880	-	100	87.713	ENSSHAG00000016050	EXOSC2	100	87.713	Sarcophilus_harrisii
ENSODEG00000016880	-	100	76.792	ENSSFOG00015011245	exosc2	100	76.792	Scleropages_formosus
ENSODEG00000016880	-	100	76.109	ENSSMAG00000003112	exosc2	100	76.109	Scophthalmus_maximus
ENSODEG00000016880	-	100	75.676	ENSSDUG00000004634	exosc2	100	75.676	Seriola_dumerili
ENSODEG00000016880	-	100	76.451	ENSSLDG00000010616	exosc2	100	76.451	Seriola_lalandi_dorsalis
ENSODEG00000016880	-	99	84.407	ENSSPUG00000013391	EXOSC2	99	84.407	Sphenodon_punctatus
ENSODEG00000016880	-	100	75.768	ENSSPAG00000022947	exosc2	100	75.768	Stegastes_partitus
ENSODEG00000016880	-	100	93.515	ENSSSCG00000005704	EXOSC2	100	93.515	Sus_scrofa
ENSODEG00000016880	-	99	80.822	ENSTGUG00000004697	EXOSC2	99	80.822	Taeniopygia_guttata
ENSODEG00000016880	-	100	72.014	ENSTRUG00000022436	exosc2	100	72.014	Takifugu_rubripes
ENSODEG00000016880	-	100	86.348	ENSTTRG00000015159	EXOSC2	100	86.348	Tursiops_truncatus
ENSODEG00000016880	-	94	89.892	ENSUAMG00000009651	EXOSC2	99	89.892	Ursus_americanus
ENSODEG00000016880	-	100	92.150	ENSUMAG00000018726	EXOSC2	100	92.150	Ursus_maritimus
ENSODEG00000016880	-	100	92.150	ENSVVUG00000027665	EXOSC2	100	92.150	Vulpes_vulpes
ENSODEG00000016880	-	100	77.133	ENSXETG00000001340	exosc2	100	77.133	Xenopus_tropicalis
ENSODEG00000016880	-	99	75.000	ENSXMAG00000005265	exosc2	99	75.000	Xiphophorus_maculatus