EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000016945 (Gene tree)
Gene ID: 101581100
Gene Symbol: RPUSD1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 1680 bases
Position: chrJH651536.1:11095256-11096935
Accession: 101581100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023100	PseudoU_synth_2	PF00849.22	9.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023369	RPUSD1-201	921	XM_004627921	ENSODEP00000023100	306 (aa)	XP_004627978	UPI0003339D4E

Gene Model

Click here to download ENSODEG00000016945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000016945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000016945	RPUSD1	100	80.769	ENSG00000007376	RPUSD1	100	88.095	Homo_sapiens
ENSODEG00000016945	RPUSD1	98	55.629	ENSAPOG00000022221	rpusd1	98	55.629	Acanthochromis_polyacanthus
ENSODEG00000016945	RPUSD1	100	81.046	ENSAMEG00000007461	RPUSD1	100	81.046	Ailuropoda_melanoleuca
ENSODEG00000016945	RPUSD1	90	62.230	ENSACIG00000015863	rpusd1	98	57.516	Amphilophus_citrinellus
ENSODEG00000016945	RPUSD1	83	64.032	ENSAOCG00000021975	rpusd1	95	56.393	Amphiprion_ocellaris
ENSODEG00000016945	RPUSD1	83	63.636	ENSAPEG00000001316	rpusd1	95	56.066	Amphiprion_percula
ENSODEG00000016945	RPUSD1	83	64.427	ENSATEG00000002984	rpusd1	98	57.049	Anabas_testudineus
ENSODEG00000016945	RPUSD1	78	59.091	ENSAPLG00000012316	RPUSD1	99	59.091	Anas_platyrhynchos
ENSODEG00000016945	RPUSD1	99	68.301	ENSACAG00000008953	RPUSD1	100	68.301	Anolis_carolinensis
ENSODEG00000016945	RPUSD1	100	81.731	ENSANAG00000024709	RPUSD1	100	82.692	Aotus_nancymaae
ENSODEG00000016945	RPUSD1	83	65.613	ENSACLG00000013692	rpusd1	98	57.980	Astatotilapia_calliptera
ENSODEG00000016945	RPUSD1	99	57.426	ENSAMXG00000019802	rpusd1	100	57.426	Astyanax_mexicanus
ENSODEG00000016945	RPUSD1	100	83.117	ENSBTAG00000000179	RPUSD1	100	83.766	Bos_taurus
ENSODEG00000016945	RPUSD1	100	81.731	ENSCJAG00000012253	RPUSD1	100	82.051	Callithrix_jacchus
ENSODEG00000016945	RPUSD1	100	80.719	ENSCAFG00000019614	RPUSD1	100	81.699	Canis_familiaris
ENSODEG00000016945	RPUSD1	100	80.719	ENSCAFG00020008891	RPUSD1	100	81.699	Canis_lupus_dingo
ENSODEG00000016945	RPUSD1	100	82.143	ENSCHIG00000012872	RPUSD1	100	82.792	Capra_hircus
ENSODEG00000016945	RPUSD1	100	83.987	ENSTSYG00000036934	RPUSD1	100	83.987	Carlito_syrichta
ENSODEG00000016945	RPUSD1	100	94.771	ENSCAPG00000014219	RPUSD1	100	94.771	Cavia_aperea
ENSODEG00000016945	RPUSD1	100	94.771	ENSCPOG00000034604	RPUSD1	100	94.771	Cavia_porcellus
ENSODEG00000016945	RPUSD1	100	82.372	ENSCCAG00000034385	RPUSD1	100	82.692	Cebus_capucinus
ENSODEG00000016945	RPUSD1	100	81.410	ENSCATG00000042983	RPUSD1	100	81.731	Cercocebus_atys
ENSODEG00000016945	RPUSD1	100	96.078	ENSCLAG00000013966	RPUSD1	100	96.078	Chinchilla_lanigera
ENSODEG00000016945	RPUSD1	100	82.051	ENSCSAG00000012121	RPUSD1	100	82.372	Chlorocebus_sabaeus
ENSODEG00000016945	RPUSD1	99	65.789	ENSCPBG00000021101	RPUSD1	99	65.789	Chrysemys_picta_bellii
ENSODEG00000016945	RPUSD1	92	85.409	ENSCANG00000028576	RPUSD1	100	85.409	Colobus_angolensis_palliatus
ENSODEG00000016945	RPUSD1	100	83.987	ENSCGRG00001014253	Rpusd1	100	83.987	Cricetulus_griseus_chok1gshd
ENSODEG00000016945	RPUSD1	100	83.987	ENSCGRG00000017995	Rpusd1	100	83.987	Cricetulus_griseus_crigri
ENSODEG00000016945	RPUSD1	99	56.352	ENSCSEG00000018512	rpusd1	100	56.352	Cynoglossus_semilaevis
ENSODEG00000016945	RPUSD1	98	55.482	ENSCVAG00000022746	rpusd1	98	55.482	Cyprinodon_variegatus
ENSODEG00000016945	RPUSD1	99	61.386	ENSDARG00000060192	rpusd1	100	61.386	Danio_rerio
ENSODEG00000016945	RPUSD1	100	78.205	ENSDNOG00000003721	RPUSD1	100	78.526	Dasypus_novemcinctus
ENSODEG00000016945	RPUSD1	100	84.967	ENSDORG00000026656	Rpusd1	100	85.621	Dipodomys_ordii
ENSODEG00000016945	RPUSD1	99	47.022	ENSEBUG00000008767	rpusd1	94	47.022	Eptatretus_burgeri
ENSODEG00000016945	RPUSD1	100	81.646	ENSEASG00005018421	RPUSD1	76	82.911	Equus_asinus_asinus
ENSODEG00000016945	RPUSD1	83	61.024	ENSELUG00000014307	rpusd1	88	55.082	Esox_lucius
ENSODEG00000016945	RPUSD1	100	82.026	ENSFCAG00000010359	RPUSD1	100	82.026	Felis_catus
ENSODEG00000016945	RPUSD1	99	66.007	ENSFALG00000003211	RPUSD1	100	66.007	Ficedula_albicollis
ENSODEG00000016945	RPUSD1	100	94.118	ENSFDAG00000013398	RPUSD1	100	94.118	Fukomys_damarensis
ENSODEG00000016945	RPUSD1	83	62.055	ENSFHEG00000004736	rpusd1	98	54.785	Fundulus_heteroclitus
ENSODEG00000016945	RPUSD1	83	62.846	ENSGMOG00000010756	rpusd1	98	55.921	Gadus_morhua
ENSODEG00000016945	RPUSD1	99	63.871	ENSGALG00000005315	RPUSD1	100	63.871	Gallus_gallus
ENSODEG00000016945	RPUSD1	98	55.667	ENSGAFG00000009886	rpusd1	98	55.667	Gambusia_affinis
ENSODEG00000016945	RPUSD1	82	63.745	ENSGACG00000014276	rpusd1	97	55.776	Gasterosteus_aculeatus
ENSODEG00000016945	RPUSD1	99	64.821	ENSGAGG00000004181	RPUSD1	99	64.821	Gopherus_agassizii
ENSODEG00000016945	RPUSD1	100	80.449	ENSGGOG00000013997	RPUSD1	100	80.769	Gorilla_gorilla
ENSODEG00000016945	RPUSD1	83	65.217	ENSHBUG00000023728	rpusd1	98	57.655	Haplochromis_burtoni
ENSODEG00000016945	RPUSD1	100	94.118	ENSHGLG00000002595	RPUSD1	100	94.118	Heterocephalus_glaber_female
ENSODEG00000016945	RPUSD1	100	94.118	ENSHGLG00100014303	RPUSD1	100	94.118	Heterocephalus_glaber_male
ENSODEG00000016945	RPUSD1	98	58.140	ENSHCOG00000002390	rpusd1	99	58.140	Hippocampus_comes
ENSODEG00000016945	RPUSD1	99	60.197	ENSIPUG00000001570	rpusd1	99	60.197	Ictalurus_punctatus
ENSODEG00000016945	RPUSD1	100	87.255	ENSSTOG00000004276	RPUSD1	100	87.255	Ictidomys_tridecemlineatus
ENSODEG00000016945	RPUSD1	100	86.928	ENSJJAG00000015696	Rpusd1	100	86.928	Jaculus_jaculus
ENSODEG00000016945	RPUSD1	83	62.055	ENSKMAG00000017287	rpusd1	98	55.000	Kryptolebias_marmoratus
ENSODEG00000016945	RPUSD1	98	56.066	ENSLBEG00000022502	rpusd1	98	57.049	Labrus_bergylta
ENSODEG00000016945	RPUSD1	98	56.066	ENSLBEG00000013354	RPUSD1	98	57.049	Labrus_bergylta
ENSODEG00000016945	RPUSD1	99	61.258	ENSLACG00000008869	RPUSD1	99	61.258	Latimeria_chalumnae
ENSODEG00000016945	RPUSD1	71	73.611	ENSLOCG00000005682	rpusd1	99	73.611	Lepisosteus_oculatus
ENSODEG00000016945	RPUSD1	100	78.431	ENSLAFG00000002115	RPUSD1	100	78.431	Loxodonta_africana
ENSODEG00000016945	RPUSD1	100	81.731	ENSMFAG00000003961	RPUSD1	100	82.051	Macaca_fascicularis
ENSODEG00000016945	RPUSD1	100	81.731	ENSMMUG00000000842	RPUSD1	100	82.051	Macaca_mulatta
ENSODEG00000016945	RPUSD1	100	81.731	ENSMNEG00000042712	RPUSD1	100	82.051	Macaca_nemestrina
ENSODEG00000016945	RPUSD1	100	81.731	ENSMLEG00000030591	RPUSD1	100	82.051	Mandrillus_leucophaeus
ENSODEG00000016945	RPUSD1	87	61.481	ENSMAMG00000004735	rpusd1	98	56.863	Mastacembelus_armatus
ENSODEG00000016945	RPUSD1	83	65.613	ENSMZEG00005003214	rpusd1	98	57.980	Maylandia_zebra
ENSODEG00000016945	RPUSD1	97	64.026	ENSMGAG00000005447	RPUSD1	99	64.026	Meleagris_gallopavo
ENSODEG00000016945	RPUSD1	86	80.916	ENSMAUG00000019998	Rpusd1	100	80.916	Mesocricetus_auratus
ENSODEG00000016945	RPUSD1	100	84.142	ENSMICG00000017561	RPUSD1	100	83.974	Microcebus_murinus
ENSODEG00000016945	RPUSD1	100	85.294	ENSMOCG00000014082	Rpusd1	100	85.294	Microtus_ochrogaster
ENSODEG00000016945	RPUSD1	80	65.306	ENSMMOG00000012569	rpusd1	99	56.667	Mola_mola
ENSODEG00000016945	RPUSD1	100	68.489	ENSMODG00000016882	RPUSD1	100	68.810	Monodelphis_domestica
ENSODEG00000016945	RPUSD1	83	64.822	ENSMALG00000017818	rpusd1	98	57.190	Monopterus_albus
ENSODEG00000016945	RPUSD1	100	84.967	MGP_CAROLIEiJ_G0021244	Rpusd1	100	84.967	Mus_caroli
ENSODEG00000016945	RPUSD1	100	84.967	ENSMUSG00000041199	Rpusd1	100	84.967	Mus_musculus
ENSODEG00000016945	RPUSD1	100	84.091	MGP_PahariEiJ_G0023562	Rpusd1	100	84.091	Mus_pahari
ENSODEG00000016945	RPUSD1	100	84.967	MGP_SPRETEiJ_G0022155	Rpusd1	100	84.967	Mus_spretus
ENSODEG00000016945	RPUSD1	100	81.046	ENSMPUG00000015897	RPUSD1	100	81.699	Mustela_putorius_furo
ENSODEG00000016945	RPUSD1	100	84.295	ENSMLUG00000001089	RPUSD1	100	84.615	Myotis_lucifugus
ENSODEG00000016945	RPUSD1	100	86.275	ENSNGAG00000003595	Rpusd1	100	86.275	Nannospalax_galili
ENSODEG00000016945	RPUSD1	81	64.919	ENSNBRG00000006457	rpusd1	98	57.525	Neolamprologus_brichardi
ENSODEG00000016945	RPUSD1	55	73.714	ENSNLEG00000008424	-	100	74.857	Nomascus_leucogenys
ENSODEG00000016945	RPUSD1	100	68.489	ENSMEUG00000016049	RPUSD1	100	68.489	Notamacropus_eugenii
ENSODEG00000016945	RPUSD1	99	77.303	ENSOPRG00000008340	RPUSD1	99	77.303	Ochotona_princeps
ENSODEG00000016945	RPUSD1	83	64.032	ENSONIG00000015672	rpusd1	99	57.329	Oreochromis_niloticus
ENSODEG00000016945	RPUSD1	99	56.678	ENSORLG00000013009	rpusd1	99	56.678	Oryzias_latipes
ENSODEG00000016945	RPUSD1	99	56.352	ENSORLG00020010382	rpusd1	99	56.352	Oryzias_latipes_hni
ENSODEG00000016945	RPUSD1	99	55.700	ENSORLG00015021354	rpusd1	99	55.700	Oryzias_latipes_hsok
ENSODEG00000016945	RPUSD1	98	56.536	ENSOMEG00000021426	rpusd1	98	57.191	Oryzias_melastigma
ENSODEG00000016945	RPUSD1	100	85.577	ENSOGAG00000003795	RPUSD1	100	85.577	Otolemur_garnettii
ENSODEG00000016945	RPUSD1	100	82.143	ENSOARG00000014254	RPUSD1	100	82.792	Ovis_aries
ENSODEG00000016945	RPUSD1	100	80.449	ENSPPAG00000034797	RPUSD1	100	80.769	Pan_paniscus
ENSODEG00000016945	RPUSD1	100	81.699	ENSPPRG00000012389	RPUSD1	100	81.699	Panthera_pardus
ENSODEG00000016945	RPUSD1	100	81.373	ENSPTIG00000008545	RPUSD1	92	81.373	Panthera_tigris_altaica
ENSODEG00000016945	RPUSD1	100	80.449	ENSPTRG00000007565	RPUSD1	100	80.769	Pan_troglodytes
ENSODEG00000016945	RPUSD1	100	81.090	ENSPANG00000024401	RPUSD1	100	81.410	Papio_anubis
ENSODEG00000016945	RPUSD1	99	60.390	ENSPKIG00000018890	rpusd1	91	60.390	Paramormyrops_kingsleyae
ENSODEG00000016945	RPUSD1	99	65.584	ENSPSIG00000013945	RPUSD1	100	65.584	Pelodiscus_sinensis
ENSODEG00000016945	RPUSD1	98	58.194	ENSPMGG00000014950	rpusd1	98	58.194	Periophthalmus_magnuspinnatus
ENSODEG00000016945	RPUSD1	100	84.967	ENSPEMG00000000497	Rpusd1	100	84.967	Peromyscus_maniculatus_bairdii
ENSODEG00000016945	RPUSD1	84	56.371	ENSPMAG00000001563	rpusd1	99	50.814	Petromyzon_marinus
ENSODEG00000016945	RPUSD1	100	69.608	ENSPCIG00000021216	-	94	69.608	Phascolarctos_cinereus
ENSODEG00000016945	RPUSD1	98	56.856	ENSPFOG00000007946	rpusd1	98	56.856	Poecilia_formosa
ENSODEG00000016945	RPUSD1	98	57.191	ENSPLAG00000011925	rpusd1	98	57.191	Poecilia_latipinna
ENSODEG00000016945	RPUSD1	98	56.522	ENSPMEG00000002910	rpusd1	98	56.522	Poecilia_mexicana
ENSODEG00000016945	RPUSD1	98	56.667	ENSPREG00000019851	rpusd1	98	56.667	Poecilia_reticulata
ENSODEG00000016945	RPUSD1	100	65.033	ENSPCAG00000002258	RPUSD1	100	65.033	Procavia_capensis
ENSODEG00000016945	RPUSD1	100	85.577	ENSPCOG00000022582	RPUSD1	100	85.577	Propithecus_coquereli
ENSODEG00000016945	RPUSD1	100	79.487	ENSPVAG00000013104	RPUSD1	100	79.808	Pteropus_vampyrus
ENSODEG00000016945	RPUSD1	83	65.217	ENSPNYG00000024076	rpusd1	98	57.655	Pundamilia_nyererei
ENSODEG00000016945	RPUSD1	99	56.766	ENSPNAG00000013806	rpusd1	100	56.766	Pygocentrus_nattereri
ENSODEG00000016945	RPUSD1	100	84.641	ENSRNOG00000023639	Rpusd1	100	84.641	Rattus_norvegicus
ENSODEG00000016945	RPUSD1	100	81.410	ENSRBIG00000030238	RPUSD1	100	81.731	Rhinopithecus_bieti
ENSODEG00000016945	RPUSD1	100	81.410	ENSRROG00000036663	RPUSD1	100	81.731	Rhinopithecus_roxellana
ENSODEG00000016945	RPUSD1	100	82.353	ENSSBOG00000033063	RPUSD1	100	83.007	Saimiri_boliviensis_boliviensis
ENSODEG00000016945	RPUSD1	100	68.627	ENSSHAG00000013500	RPUSD1	100	68.627	Sarcophilus_harrisii
ENSODEG00000016945	RPUSD1	99	60.656	ENSSFOG00015014394	rpusd1	99	60.656	Scleropages_formosus
ENSODEG00000016945	RPUSD1	98	55.663	ENSSMAG00000008045	rpusd1	91	56.721	Scophthalmus_maximus
ENSODEG00000016945	RPUSD1	83	66.008	ENSSDUG00000001829	rpusd1	95	58.361	Seriola_dumerili
ENSODEG00000016945	RPUSD1	83	66.008	ENSSLDG00000020853	rpusd1	95	58.361	Seriola_lalandi_dorsalis
ENSODEG00000016945	RPUSD1	55	88.024	ENSSARG00000011187	-	100	88.024	Sorex_araneus
ENSODEG00000016945	RPUSD1	63	52.850	ENSSPUG00000005119	-	100	52.850	Sphenodon_punctatus
ENSODEG00000016945	RPUSD1	98	57.705	ENSSPAG00000012708	rpusd1	98	57.705	Stegastes_partitus
ENSODEG00000016945	RPUSD1	100	82.372	ENSSSCG00000008000	RPUSD1	99	87.938	Sus_scrofa
ENSODEG00000016945	RPUSD1	83	72.941	ENSTGUG00000015375	RPUSD1	100	72.941	Taeniopygia_guttata
ENSODEG00000016945	RPUSD1	98	56.209	ENSTRUG00000003041	rpusd1	98	56.209	Takifugu_rubripes
ENSODEG00000016945	RPUSD1	83	61.265	ENSTNIG00000002660	rpusd1	92	61.265	Tetraodon_nigroviridis
ENSODEG00000016945	RPUSD1	100	83.013	ENSTTRG00000010167	RPUSD1	100	83.013	Tursiops_truncatus
ENSODEG00000016945	RPUSD1	100	79.739	ENSUAMG00000012736	RPUSD1	100	80.719	Ursus_americanus
ENSODEG00000016945	RPUSD1	100	79.739	ENSUMAG00000021174	RPUSD1	100	80.719	Ursus_maritimus
ENSODEG00000016945	RPUSD1	100	80.392	ENSVVUG00000012357	RPUSD1	100	80.392	Vulpes_vulpes
ENSODEG00000016945	RPUSD1	100	59.477	ENSXETG00000007184	rpusd1	100	59.477	Xenopus_tropicalis
ENSODEG00000016945	RPUSD1	98	55.333	ENSXCOG00000017930	rpusd1	98	55.333	Xiphophorus_couchianus
ENSODEG00000016945	RPUSD1	98	55.333	ENSXMAG00000024084	rpusd1	98	55.333	Xiphophorus_maculatus