EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	1	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	2	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	3	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	4	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	5	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	6	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	7	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	8	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	9	10
ENSODEP00000023248	zf-C2H2	PF00096.26	1.2e-59	10	10
ENSODEP00000023248	zf-met	PF12874.7	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023517	-	2043	-	ENSODEP00000023248	345 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000017047	-	86	37.500	ENSODEG00000006725	GTF3A	70	37.500
ENSODEG00000017047	-	92	39.716	ENSODEG00000014451	MAZ	76	37.714
ENSODEG00000017047	-	81	36.019	ENSODEG00000011185	ZNF784	72	39.665
ENSODEG00000017047	-	91	57.143	ENSODEG00000009980	ZNF582	66	57.143
ENSODEG00000017047	-	89	42.268	ENSODEG00000002057	ZNF423	70	39.726
ENSODEG00000017047	-	90	39.446	ENSODEG00000020561	ZNF319	91	39.550
ENSODEG00000017047	-	90	42.105	ENSODEG00000005735	ZFP64	74	37.805
ENSODEG00000017047	-	90	55.738	ENSODEG00000014404	ZFP1	85	55.738
ENSODEG00000017047	-	88	56.637	ENSODEG00000005837	ZNF2	62	56.637
ENSODEG00000017047	-	90	38.973	ENSODEG00000013318	ZNF574	93	39.104
ENSODEG00000017047	-	90	67.524	ENSODEG00000016460	-	84	67.524
ENSODEG00000017047	-	87	46.269	ENSODEG00000006410	-	100	46.269
ENSODEG00000017047	-	100	58.725	ENSODEG00000015543	-	91	58.725
ENSODEG00000017047	-	91	51.524	ENSODEG00000008278	-	79	51.524
ENSODEG00000017047	-	87	51.408	ENSODEG00000009133	PRDM5	67	51.408
ENSODEG00000017047	-	97	55.738	ENSODEG00000002735	ZFP62	96	56.711
ENSODEG00000017047	-	90	56.757	ENSODEG00000000805	-	100	56.757
ENSODEG00000017047	-	95	40.530	ENSODEG00000013022	ZBTB41	50	40.530
ENSODEG00000017047	-	91	51.475	ENSODEG00000009193	ZNF112	72	51.475
ENSODEG00000017047	-	90	52.529	ENSODEG00000014575	-	51	52.669
ENSODEG00000017047	-	90	54.064	ENSODEG00000009602	ZNF81	72	54.064
ENSODEG00000017047	-	91	54.651	ENSODEG00000008851	-	74	54.651
ENSODEG00000017047	-	77	41.538	ENSODEG00000014837	-	68	41.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017047	-	100	94.236	ENSCPOG00000033345	-	100	94.236	Cavia_porcellus
ENSODEG00000017047	-	99	89.244	ENSCGRG00001023858	Zfp560	72	89.244	Cricetulus_griseus_chok1gshd
ENSODEG00000017047	-	99	89.244	ENSCGRG00000012088	Zfp560	72	89.244	Cricetulus_griseus_crigri
ENSODEG00000017047	-	100	94.509	ENSFDAG00000008687	-	100	94.509	Fukomys_damarensis
ENSODEG00000017047	-	100	93.642	ENSHGLG00000019054	-	100	93.642	Heterocephalus_glaber_female
ENSODEG00000017047	-	100	93.642	ENSHGLG00100015134	-	90	93.642	Heterocephalus_glaber_male
ENSODEG00000017047	-	100	89.884	ENSSTOG00000033893	-	91	89.884	Ictidomys_tridecemlineatus
ENSODEG00000017047	-	100	85.797	ENSMOCG00000007908	Zfp560	84	85.797	Microtus_ochrogaster
ENSODEG00000017047	-	100	89.565	ENSNGAG00000015897	Zfp560	83	89.565	Nannospalax_galili
ENSODEG00000017047	-	91	85.127	ENSOCUG00000029594	-	90	85.127	Oryctolagus_cuniculus
ENSODEG00000017047	-	90	62.302	ENSOGAG00000025131	ZNF121	97	62.302	Otolemur_garnettii
ENSODEG00000017047	-	100	86.087	ENSRNOG00000048394	Zfp560	82	86.087	Rattus_norvegicus