EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000017193 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 4104 bases
Position: chrJH651517.1:28757986-28762089
Accession: 101583690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023461	PseudoU_synth_2	PF00849.22	2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023731	RPUSD2-201	1590	XM_004623522	ENSODEP00000023461	529 (aa)	XP_004623579	-

Gene Model

Click here to download ENSODEG00000017193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017193	RPUSD2	97	85.277	ENSG00000166133	RPUSD2	96	85.277	Homo_sapiens
ENSODEG00000017193	RPUSD2	81	58.206	ENSAPOG00000000817	rpusd2	90	54.545	Acanthochromis_polyacanthus
ENSODEG00000017193	RPUSD2	98	85.496	ENSAMEG00000016996	RPUSD2	96	85.496	Ailuropoda_melanoleuca
ENSODEG00000017193	RPUSD2	81	60.000	ENSACIG00000024029	rpusd2	99	56.225	Amphilophus_citrinellus
ENSODEG00000017193	RPUSD2	81	58.734	ENSAOCG00000015237	rpusd2	90	54.651	Amphiprion_ocellaris
ENSODEG00000017193	RPUSD2	81	57.642	ENSAPEG00000021763	rpusd2	90	54.070	Amphiprion_percula
ENSODEG00000017193	RPUSD2	81	57.234	ENSATEG00000015242	rpusd2	86	54.776	Anabas_testudineus
ENSODEG00000017193	RPUSD2	78	67.139	ENSAPLG00000004723	RPUSD2	99	67.139	Anas_platyrhynchos
ENSODEG00000017193	RPUSD2	81	68.027	ENSACAG00000013893	RPUSD2	91	68.027	Anolis_carolinensis
ENSODEG00000017193	RPUSD2	97	86.424	ENSANAG00000009691	RPUSD2	96	86.424	Aotus_nancymaae
ENSODEG00000017193	RPUSD2	81	57.734	ENSACLG00000019531	rpusd2	82	57.203	Astatotilapia_calliptera
ENSODEG00000017193	RPUSD2	82	57.851	ENSAMXG00000013376	rpusd2	89	54.833	Astyanax_mexicanus
ENSODEG00000017193	RPUSD2	97	83.962	ENSBTAG00000003193	RPUSD2	96	84.310	Bos_taurus
ENSODEG00000017193	RPUSD2	74	35.279	WBGene00019498	K07E8.7	97	35.279	Caenorhabditis_elegans
ENSODEG00000017193	RPUSD2	97	86.233	ENSCJAG00000020841	RPUSD2	96	86.233	Callithrix_jacchus
ENSODEG00000017193	RPUSD2	97	85.038	ENSCAFG00000009165	RPUSD2	96	85.038	Canis_familiaris
ENSODEG00000017193	RPUSD2	97	84.848	ENSCAFG00020005849	RPUSD2	96	84.848	Canis_lupus_dingo
ENSODEG00000017193	RPUSD2	97	83.365	ENSCHIG00000006152	RPUSD2	96	83.743	Capra_hircus
ENSODEG00000017193	RPUSD2	98	86.450	ENSTSYG00000012844	RPUSD2	96	86.450	Carlito_syrichta
ENSODEG00000017193	RPUSD2	54	90.592	ENSCAPG00000006895	-	100	90.592	Cavia_aperea
ENSODEG00000017193	RPUSD2	99	88.491	ENSCPOG00000013201	RPUSD2	97	88.491	Cavia_porcellus
ENSODEG00000017193	RPUSD2	97	86.122	ENSCCAG00000024378	RPUSD2	96	86.122	Cebus_capucinus
ENSODEG00000017193	RPUSD2	97	85.660	ENSCATG00000043734	RPUSD2	96	85.660	Cercocebus_atys
ENSODEG00000017193	RPUSD2	98	92.857	ENSCLAG00000011862	RPUSD2	96	92.857	Chinchilla_lanigera
ENSODEG00000017193	RPUSD2	95	86.106	ENSCSAG00000007538	RPUSD2	100	86.106	Chlorocebus_sabaeus
ENSODEG00000017193	RPUSD2	64	88.630	ENSCHOG00000004834	RPUSD2	63	88.921	Choloepus_hoffmanni
ENSODEG00000017193	RPUSD2	89	61.583	ENSCPBG00000013419	RPUSD2	97	61.583	Chrysemys_picta_bellii
ENSODEG00000017193	RPUSD2	97	86.424	ENSCANG00000003659	RPUSD2	96	86.424	Colobus_angolensis_palliatus
ENSODEG00000017193	RPUSD2	98	80.819	ENSCGRG00001009839	Rpusd2	94	80.819	Cricetulus_griseus_chok1gshd
ENSODEG00000017193	RPUSD2	98	80.819	ENSCGRG00000012348	Rpusd2	97	80.819	Cricetulus_griseus_crigri
ENSODEG00000017193	RPUSD2	87	55.943	ENSCSEG00000001953	rpusd2	84	55.943	Cynoglossus_semilaevis
ENSODEG00000017193	RPUSD2	81	60.538	ENSCVAG00000010848	rpusd2	90	56.548	Cyprinodon_variegatus
ENSODEG00000017193	RPUSD2	82	59.300	ENSDARG00000060992	rpusd2	82	58.178	Danio_rerio
ENSODEG00000017193	RPUSD2	97	82.308	ENSDNOG00000047745	RPUSD2	96	82.308	Dasypus_novemcinctus
ENSODEG00000017193	RPUSD2	81	89.559	ENSDORG00000009092	Rpusd2	100	89.559	Dipodomys_ordii
ENSODEG00000017193	RPUSD2	79	48.736	FBgn0032256	RluA-2	78	48.736	Drosophila_melanogaster
ENSODEG00000017193	RPUSD2	80	48.180	FBgn0051719	RluA-1	63	48.180	Drosophila_melanogaster
ENSODEG00000017193	RPUSD2	96	81.977	ENSETEG00000008581	RPUSD2	95	81.977	Echinops_telfairi
ENSODEG00000017193	RPUSD2	78	36.131	ENSEBUG00000012149	rpusd2	94	34.426	Eptatretus_burgeri
ENSODEG00000017193	RPUSD2	98	83.804	ENSEASG00005016463	RPUSD2	95	83.804	Equus_asinus_asinus
ENSODEG00000017193	RPUSD2	98	83.992	ENSECAG00000024178	RPUSD2	95	83.992	Equus_caballus
ENSODEG00000017193	RPUSD2	97	71.264	ENSEEUG00000005132	RPUSD2	96	71.264	Erinaceus_europaeus
ENSODEG00000017193	RPUSD2	84	58.228	ENSELUG00000016786	rpusd2	86	58.228	Esox_lucius
ENSODEG00000017193	RPUSD2	96	85.143	ENSFCAG00000040796	RPUSD2	95	85.143	Felis_catus
ENSODEG00000017193	RPUSD2	80	72.350	ENSFALG00000001122	RPUSD2	96	72.398	Ficedula_albicollis
ENSODEG00000017193	RPUSD2	95	88.454	ENSFDAG00000003070	RPUSD2	100	88.454	Fukomys_damarensis
ENSODEG00000017193	RPUSD2	83	58.785	ENSFHEG00000007518	rpusd2	83	58.785	Fundulus_heteroclitus
ENSODEG00000017193	RPUSD2	81	58.590	ENSGMOG00000011014	rpusd2	98	56.879	Gadus_morhua
ENSODEG00000017193	RPUSD2	86	65.298	ENSGALG00000041216	RPUSD2	99	65.298	Gallus_gallus
ENSODEG00000017193	RPUSD2	83	59.333	ENSGAFG00000003390	rpusd2	80	59.333	Gambusia_affinis
ENSODEG00000017193	RPUSD2	88	54.043	ENSGACG00000008656	rpusd2	97	54.043	Gasterosteus_aculeatus
ENSODEG00000017193	RPUSD2	89	64.523	ENSGAGG00000013098	RPUSD2	94	64.523	Gopherus_agassizii
ENSODEG00000017193	RPUSD2	97	84.704	ENSGGOG00000006684	RPUSD2	96	84.704	Gorilla_gorilla
ENSODEG00000017193	RPUSD2	81	57.516	ENSHBUG00000023777	rpusd2	82	56.992	Haplochromis_burtoni
ENSODEG00000017193	RPUSD2	99	88.213	ENSHGLG00000012765	RPUSD2	97	88.213	Heterocephalus_glaber_female
ENSODEG00000017193	RPUSD2	99	88.213	ENSHGLG00100006653	RPUSD2	97	88.213	Heterocephalus_glaber_male
ENSODEG00000017193	RPUSD2	88	55.888	ENSHCOG00000015587	rpusd2	86	55.888	Hippocampus_comes
ENSODEG00000017193	RPUSD2	83	59.611	ENSIPUG00000021006	rpusd2	79	59.611	Ictalurus_punctatus
ENSODEG00000017193	RPUSD2	97	84.746	ENSSTOG00000025619	RPUSD2	96	84.746	Ictidomys_tridecemlineatus
ENSODEG00000017193	RPUSD2	96	83.594	ENSJJAG00000023160	Rpusd2	95	84.570	Jaculus_jaculus
ENSODEG00000017193	RPUSD2	81	57.974	ENSKMAG00000006618	rpusd2	86	55.403	Kryptolebias_marmoratus
ENSODEG00000017193	RPUSD2	81	57.330	ENSLBEG00000021571	rpusd2	89	54.297	Labrus_bergylta
ENSODEG00000017193	RPUSD2	81	65.132	ENSLACG00000017338	RPUSD2	100	65.132	Latimeria_chalumnae
ENSODEG00000017193	RPUSD2	81	62.700	ENSLOCG00000014755	rpusd2	92	61.894	Lepisosteus_oculatus
ENSODEG00000017193	RPUSD2	97	84.200	ENSLAFG00000015588	RPUSD2	96	84.200	Loxodonta_africana
ENSODEG00000017193	RPUSD2	97	86.042	ENSMFAG00000045062	RPUSD2	96	86.042	Macaca_fascicularis
ENSODEG00000017193	RPUSD2	97	85.660	ENSMMUG00000001483	RPUSD2	96	85.660	Macaca_mulatta
ENSODEG00000017193	RPUSD2	97	75.332	ENSMNEG00000041429	RPUSD2	96	75.332	Macaca_nemestrina
ENSODEG00000017193	RPUSD2	74	90.379	ENSMLEG00000036551	RPUSD2	95	90.379	Mandrillus_leucophaeus
ENSODEG00000017193	RPUSD2	81	56.184	ENSMAMG00000001077	rpusd2	80	55.714	Mastacembelus_armatus
ENSODEG00000017193	RPUSD2	81	57.734	ENSMZEG00005006947	rpusd2	90	57.203	Maylandia_zebra
ENSODEG00000017193	RPUSD2	83	69.820	ENSMGAG00000003058	RPUSD2	98	69.820	Meleagris_gallopavo
ENSODEG00000017193	RPUSD2	97	82.927	ENSMAUG00000020467	Rpusd2	96	82.927	Mesocricetus_auratus
ENSODEG00000017193	RPUSD2	98	87.023	ENSMICG00000028637	RPUSD2	96	87.023	Microcebus_murinus
ENSODEG00000017193	RPUSD2	97	81.086	ENSMOCG00000020061	Rpusd2	96	81.086	Microtus_ochrogaster
ENSODEG00000017193	RPUSD2	81	58.705	ENSMMOG00000012020	rpusd2	87	56.389	Mola_mola
ENSODEG00000017193	RPUSD2	89	75.876	ENSMODG00000000300	RPUSD2	89	75.876	Monodelphis_domestica
ENSODEG00000017193	RPUSD2	81	54.757	ENSMALG00000010024	rpusd2	81	54.397	Monopterus_albus
ENSODEG00000017193	RPUSD2	97	81.989	MGP_CAROLIEiJ_G0024130	Rpusd2	96	81.989	Mus_caroli
ENSODEG00000017193	RPUSD2	97	81.801	ENSMUSG00000027324	Rpusd2	96	81.801	Mus_musculus
ENSODEG00000017193	RPUSD2	97	82.739	MGP_PahariEiJ_G0025573	Rpusd2	96	82.739	Mus_pahari
ENSODEG00000017193	RPUSD2	99	79.566	MGP_SPRETEiJ_G0025046	Rpusd2	99	79.566	Mus_spretus
ENSODEG00000017193	RPUSD2	98	83.865	ENSMPUG00000008517	RPUSD2	97	83.865	Mustela_putorius_furo
ENSODEG00000017193	RPUSD2	95	85.185	ENSMLUG00000007971	RPUSD2	100	85.185	Myotis_lucifugus
ENSODEG00000017193	RPUSD2	98	82.732	ENSNGAG00000014126	Rpusd2	97	82.732	Nannospalax_galili
ENSODEG00000017193	RPUSD2	81	60.412	ENSNBRG00000010070	rpusd2	81	59.778	Neolamprologus_brichardi
ENSODEG00000017193	RPUSD2	97	85.660	ENSNLEG00000035735	RPUSD2	96	85.660	Nomascus_leucogenys
ENSODEG00000017193	RPUSD2	99	70.841	ENSMEUG00000008500	RPUSD2	99	70.841	Notamacropus_eugenii
ENSODEG00000017193	RPUSD2	95	81.213	ENSOPRG00000014177	-	94	81.213	Ochotona_princeps
ENSODEG00000017193	RPUSD2	81	60.369	ENSONIG00000020102	rpusd2	89	59.732	Oreochromis_niloticus
ENSODEG00000017193	RPUSD2	98	84.381	ENSOCUG00000015745	RPUSD2	93	84.381	Oryctolagus_cuniculus
ENSODEG00000017193	RPUSD2	82	59.778	ENSORLG00000015516	rpusd2	82	59.778	Oryzias_latipes
ENSODEG00000017193	RPUSD2	83	59.161	ENSORLG00020010533	rpusd2	82	59.161	Oryzias_latipes_hni
ENSODEG00000017193	RPUSD2	82	59.471	ENSORLG00015009206	rpusd2	82	59.471	Oryzias_latipes_hsok
ENSODEG00000017193	RPUSD2	81	59.908	ENSOMEG00000007355	rpusd2	81	56.379	Oryzias_melastigma
ENSODEG00000017193	RPUSD2	97	84.291	ENSOGAG00000004867	RPUSD2	100	84.291	Otolemur_garnettii
ENSODEG00000017193	RPUSD2	98	80.970	ENSOARG00000020235	RPUSD2	96	82.732	Ovis_aries
ENSODEG00000017193	RPUSD2	97	85.468	ENSPPAG00000032874	RPUSD2	96	85.468	Pan_paniscus
ENSODEG00000017193	RPUSD2	97	85.797	ENSPPRG00000010446	RPUSD2	96	85.797	Panthera_pardus
ENSODEG00000017193	RPUSD2	97	85.797	ENSPTIG00000013316	RPUSD2	96	85.797	Panthera_tigris_altaica
ENSODEG00000017193	RPUSD2	97	85.468	ENSPTRG00000006924	RPUSD2	96	85.468	Pan_troglodytes
ENSODEG00000017193	RPUSD2	97	85.824	ENSPANG00000019339	RPUSD2	96	85.824	Papio_anubis
ENSODEG00000017193	RPUSD2	82	62.595	ENSPKIG00000023017	rpusd2	78	60.235	Paramormyrops_kingsleyae
ENSODEG00000017193	RPUSD2	63	65.994	ENSPSIG00000012680	RPUSD2	99	65.994	Pelodiscus_sinensis
ENSODEG00000017193	RPUSD2	81	59.767	ENSPMGG00000018165	rpusd2	79	59.142	Periophthalmus_magnuspinnatus
ENSODEG00000017193	RPUSD2	97	85.493	ENSPEMG00000012878	Rpusd2	95	85.493	Peromyscus_maniculatus_bairdii
ENSODEG00000017193	RPUSD2	87	77.273	ENSPCIG00000023199	RPUSD2	85	77.273	Phascolarctos_cinereus
ENSODEG00000017193	RPUSD2	83	59.688	ENSPFOG00000006829	rpusd2	81	59.688	Poecilia_formosa
ENSODEG00000017193	RPUSD2	84	58.734	ENSPLAG00000022914	rpusd2	93	58.734	Poecilia_latipinna
ENSODEG00000017193	RPUSD2	84	58.515	ENSPMEG00000009835	rpusd2	93	58.515	Poecilia_mexicana
ENSODEG00000017193	RPUSD2	83	60.134	ENSPREG00000016441	rpusd2	78	60.134	Poecilia_reticulata
ENSODEG00000017193	RPUSD2	97	85.277	ENSPPYG00000006355	RPUSD2	96	85.277	Pongo_abelii
ENSODEG00000017193	RPUSD2	98	85.496	ENSPCOG00000028019	RPUSD2	96	85.496	Propithecus_coquereli
ENSODEG00000017193	RPUSD2	98	84.924	ENSPVAG00000001837	RPUSD2	96	84.924	Pteropus_vampyrus
ENSODEG00000017193	RPUSD2	81	60.140	ENSPNYG00000021507	rpusd2	88	59.910	Pundamilia_nyererei
ENSODEG00000017193	RPUSD2	97	81.015	ENSRNOG00000046797	Rpusd2	96	81.015	Rattus_norvegicus
ENSODEG00000017193	RPUSD2	97	81.015	ENSRNOG00000010528	LOC100911166	96	81.015	Rattus_norvegicus
ENSODEG00000017193	RPUSD2	97	86.233	ENSRBIG00000030813	RPUSD2	96	86.233	Rhinopithecus_bieti
ENSODEG00000017193	RPUSD2	97	86.042	ENSRROG00000026664	RPUSD2	96	86.042	Rhinopithecus_roxellana
ENSODEG00000017193	RPUSD2	53	45.704	YDL036C	-	63	45.704	Saccharomyces_cerevisiae
ENSODEG00000017193	RPUSD2	55	47.635	YOL066C	RIB2	50	47.635	Saccharomyces_cerevisiae
ENSODEG00000017193	RPUSD2	99	84.815	ENSSBOG00000035031	RPUSD2	99	84.815	Saimiri_boliviensis_boliviensis
ENSODEG00000017193	RPUSD2	64	75.723	ENSSHAG00000015108	RPUSD2	91	75.723	Sarcophilus_harrisii
ENSODEG00000017193	RPUSD2	81	63.377	ENSSFOG00015019057	rpusd2	78	59.765	Scleropages_formosus
ENSODEG00000017193	RPUSD2	82	56.632	ENSSMAG00000000903	rpusd2	98	53.772	Scophthalmus_maximus
ENSODEG00000017193	RPUSD2	81	56.276	ENSSDUG00000019139	rpusd2	86	54.054	Seriola_dumerili
ENSODEG00000017193	RPUSD2	81	56.067	ENSSLDG00000005938	rpusd2	86	53.861	Seriola_lalandi_dorsalis
ENSODEG00000017193	RPUSD2	90	85.567	ENSSARG00000002792	RPUSD2	89	85.567	Sorex_araneus
ENSODEG00000017193	RPUSD2	86	63.900	ENSSPUG00000001206	RPUSD2	94	63.900	Sphenodon_punctatus
ENSODEG00000017193	RPUSD2	81	58.114	ENSSPAG00000003578	rpusd2	82	57.569	Stegastes_partitus
ENSODEG00000017193	RPUSD2	97	85.305	ENSSSCG00000036700	RPUSD2	96	85.305	Sus_scrofa
ENSODEG00000017193	RPUSD2	81	56.652	ENSTRUG00000025880	rpusd2	95	54.762	Takifugu_rubripes
ENSODEG00000017193	RPUSD2	81	59.955	ENSTNIG00000017329	rpusd2	92	59.170	Tetraodon_nigroviridis
ENSODEG00000017193	RPUSD2	98	76.236	ENSTBEG00000007933	RPUSD2	97	76.236	Tupaia_belangeri
ENSODEG00000017193	RPUSD2	98	86.260	ENSTTRG00000010585	RPUSD2	96	86.260	Tursiops_truncatus
ENSODEG00000017193	RPUSD2	95	86.301	ENSUAMG00000001470	RPUSD2	100	86.301	Ursus_americanus
ENSODEG00000017193	RPUSD2	98	85.687	ENSUMAG00000012487	RPUSD2	85	85.687	Ursus_maritimus
ENSODEG00000017193	RPUSD2	98	85.115	ENSVPAG00000003844	RPUSD2	96	85.115	Vicugna_pacos
ENSODEG00000017193	RPUSD2	97	84.659	ENSVVUG00000026590	RPUSD2	96	84.659	Vulpes_vulpes
ENSODEG00000017193	RPUSD2	84	65.939	ENSXETG00000015973	rpusd2	98	65.939	Xenopus_tropicalis
ENSODEG00000017193	RPUSD2	83	59.020	ENSXMAG00000021821	rpusd2	91	59.020	Xiphophorus_maculatus