EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000017258 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 894 bases
Position: chrJH651517.1:29887730-29888623
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023558	RRM_1	PF00076.22	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023829	-	528	-	ENSODEP00000023558	175 (aa)	-	-

Gene Model

Click here to download ENSODEG00000017258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000017258	-	59	59.615	ENSODEG00000003850	-	67	73.494
ENSODEG00000017258	-	85	65.161	ENSODEG00000002513	-	93	63.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017258	-	77	68.047	ENSG00000205937	RNPS1	66	94.737	Homo_sapiens
ENSODEG00000017258	-	77	64.516	ENSAMEG00000017861	RNPS1	52	66.250	Ailuropoda_melanoleuca
ENSODEG00000017258	-	51	62.903	ENSAPLG00000006231	RNPS1	52	64.667	Anas_platyrhynchos
ENSODEG00000017258	-	77	68.047	ENSANAG00000028802	RNPS1	92	68.718	Aotus_nancymaae
ENSODEG00000017258	-	52	50.806	ENSACLG00000025942	RNPS1	58	57.143	Astatotilapia_calliptera
ENSODEG00000017258	-	77	64.516	ENSBTAG00000009969	RNPS1	57	65.625	Bos_taurus
ENSODEG00000017258	-	56	50.000	ENSBTAG00000046336	-	51	49.351	Bos_taurus
ENSODEG00000017258	-	77	68.047	ENSCJAG00000014969	RNPS1	92	68.718	Callithrix_jacchus
ENSODEG00000017258	-	77	64.516	ENSCAFG00000019397	RNPS1	52	66.250	Canis_familiaris
ENSODEG00000017258	-	77	64.516	ENSCAFG00020026159	RNPS1	52	66.250	Canis_lupus_dingo
ENSODEG00000017258	-	54	49.219	ENSCHIG00000019523	-	52	50.000	Capra_hircus
ENSODEG00000017258	-	73	48.428	ENSCHIG00000027175	-	51	48.077	Capra_hircus
ENSODEG00000017258	-	77	68.047	ENSTSYG00000001629	RNPS1	92	68.718	Carlito_syrichta
ENSODEG00000017258	-	77	64.516	ENSCAPG00000007731	RNPS1	52	66.250	Cavia_aperea
ENSODEG00000017258	-	77	64.516	ENSCPOG00000002066	RNPS1	57	66.250	Cavia_porcellus
ENSODEG00000017258	-	77	68.047	ENSCCAG00000034480	RNPS1	92	68.718	Cebus_capucinus
ENSODEG00000017258	-	77	68.047	ENSCATG00000013756	RNPS1	92	68.718	Cercocebus_atys
ENSODEG00000017258	-	82	65.169	ENSCATG00000042361	-	87	64.641	Cercocebus_atys
ENSODEG00000017258	-	77	64.516	ENSCLAG00000015546	RNPS1	57	66.250	Chinchilla_lanigera
ENSODEG00000017258	-	57	64.925	ENSCSAG00000005219	-	52	65.806	Chlorocebus_sabaeus
ENSODEG00000017258	-	77	64.516	ENSCHOG00000004866	RNPS1	53	66.250	Choloepus_hoffmanni
ENSODEG00000017258	-	77	48.756	ENSCPBG00000000214	RNPS1	99	49.519	Chrysemys_picta_bellii
ENSODEG00000017258	-	77	68.047	ENSCANG00000041307	RNPS1	92	68.718	Colobus_angolensis_palliatus
ENSODEG00000017258	-	77	54.438	ENSCANG00000030189	-	92	56.410	Colobus_angolensis_palliatus
ENSODEG00000017258	-	77	64.516	ENSCGRG00001020431	Rnps1	57	66.250	Cricetulus_griseus_chok1gshd
ENSODEG00000017258	-	65	60.784	ENSCGRG00000014021	Rnps1	57	65.000	Cricetulus_griseus_crigri
ENSODEG00000017258	-	77	64.516	ENSDNOG00000016081	RNPS1	52	66.250	Dasypus_novemcinctus
ENSODEG00000017258	-	77	64.516	ENSDORG00000001755	Rnps1	57	66.250	Dipodomys_ordii
ENSODEG00000017258	-	77	64.516	ENSEASG00005004862	RNPS1	52	66.250	Equus_asinus_asinus
ENSODEG00000017258	-	51	64.516	ENSEEUG00000005933	RNPS1	52	66.250	Erinaceus_europaeus
ENSODEG00000017258	-	77	68.047	ENSFCAG00000007690	RNPS1	92	68.718	Felis_catus
ENSODEG00000017258	-	51	63.710	ENSFALG00000004868	RNPS1	56	65.625	Ficedula_albicollis
ENSODEG00000017258	-	77	64.516	ENSFDAG00000003386	RNPS1	57	66.250	Fukomys_damarensis
ENSODEG00000017258	-	51	63.710	ENSGALG00000009288	RNPS1	56	65.625	Gallus_gallus
ENSODEG00000017258	-	51	63.710	ENSGAGG00000010452	RNPS1	52	65.625	Gopherus_agassizii
ENSODEG00000017258	-	78	65.882	ENSGGOG00000026421	-	92	67.179	Gorilla_gorilla
ENSODEG00000017258	-	77	68.047	ENSGGOG00000014275	RNPS1	92	68.718	Gorilla_gorilla
ENSODEG00000017258	-	77	64.516	ENSHGLG00000013957	RNPS1	57	66.250	Heterocephalus_glaber_female
ENSODEG00000017258	-	77	64.516	ENSHGLG00100003539	RNPS1	57	66.250	Heterocephalus_glaber_male
ENSODEG00000017258	-	68	63.399	ENSHGLG00100015267	-	56	63.636	Heterocephalus_glaber_male
ENSODEG00000017258	-	77	63.905	ENSHGLG00100010622	-	92	62.564	Heterocephalus_glaber_male
ENSODEG00000017258	-	77	63.934	ENSSTOG00000013200	RNPS1	60	65.101	Ictidomys_tridecemlineatus
ENSODEG00000017258	-	77	64.516	ENSJJAG00000015576	-	57	66.250	Jaculus_jaculus
ENSODEG00000017258	-	57	62.406	ENSJJAG00000000532	-	78	65.000	Jaculus_jaculus
ENSODEG00000017258	-	77	64.516	ENSLAFG00000000728	RNPS1	51	66.250	Loxodonta_africana
ENSODEG00000017258	-	77	68.047	ENSMFAG00000042142	RNPS1	92	68.718	Macaca_fascicularis
ENSODEG00000017258	-	59	60.870	ENSMMUG00000041726	-	55	62.179	Macaca_mulatta
ENSODEG00000017258	-	77	68.047	ENSMMUG00000019238	-	92	68.718	Macaca_mulatta
ENSODEG00000017258	-	80	60.870	ENSMNEG00000024827	-	55	61.538	Macaca_nemestrina
ENSODEG00000017258	-	77	68.047	ENSMLEG00000036928	RNPS1	92	68.718	Mandrillus_leucophaeus
ENSODEG00000017258	-	50	40.441	ENSMAMG00000021609	-	59	53.614	Mastacembelus_armatus
ENSODEG00000017258	-	77	68.047	ENSMICG00000031543	RNPS1	92	68.205	Microcebus_murinus
ENSODEG00000017258	-	95	55.556	ENSMOCG00000000276	-	52	55.556	Microtus_ochrogaster
ENSODEG00000017258	-	77	64.516	ENSMOCG00000003429	Rnps1	57	66.250	Microtus_ochrogaster
ENSODEG00000017258	-	77	63.710	ENSMODG00000015891	RNPS1	52	65.625	Monodelphis_domestica
ENSODEG00000017258	-	77	64.516	ENSMUSG00000034681	Rnps1	57	66.250	Mus_musculus
ENSODEG00000017258	-	51	64.516	MGP_PahariEiJ_G0023498	Rnps1	57	66.250	Mus_pahari
ENSODEG00000017258	-	77	64.516	MGP_SPRETEiJ_G0022092	Rnps1	57	66.250	Mus_spretus
ENSODEG00000017258	-	77	64.516	ENSMLUG00000016808	RNPS1	52	66.250	Myotis_lucifugus
ENSODEG00000017258	-	77	64.516	ENSNGAG00000023702	Rnps1	57	66.250	Nannospalax_galili
ENSODEG00000017258	-	82	65.730	ENSNLEG00000009243	RNPS1	100	65.730	Nomascus_leucogenys
ENSODEG00000017258	-	77	64.516	ENSMEUG00000008882	RNPS1	53	65.031	Notamacropus_eugenii
ENSODEG00000017258	-	77	63.415	ENSOPRG00000016422	RNPS1	52	65.409	Ochotona_princeps
ENSODEG00000017258	-	77	64.516	ENSOCUG00000004387	-	53	66.250	Oryctolagus_cuniculus
ENSODEG00000017258	-	79	49.112	ENSOCUG00000027449	-	69	49.068	Oryctolagus_cuniculus
ENSODEG00000017258	-	79	49.112	ENSOCUG00000021516	-	67	49.068	Oryctolagus_cuniculus
ENSODEG00000017258	-	81	60.452	ENSPPAG00000011845	RNPS1	94	63.590	Pan_paniscus
ENSODEG00000017258	-	77	68.047	ENSPPRG00000011255	RNPS1	92	68.718	Panthera_pardus
ENSODEG00000017258	-	77	61.538	ENSPTIG00000015643	RNPS1	92	59.890	Panthera_tigris_altaica
ENSODEG00000017258	-	77	68.047	ENSPTRG00000031310	RNPS1	92	68.718	Pan_troglodytes
ENSODEG00000017258	-	77	68.047	ENSPANG00000015748	RNPS1	92	68.718	Papio_anubis
ENSODEG00000017258	-	51	63.710	ENSPSIG00000006048	RNPS1	52	65.625	Pelodiscus_sinensis
ENSODEG00000017258	-	77	64.516	ENSPEMG00000012797	Rnps1	57	66.250	Peromyscus_maniculatus_bairdii
ENSODEG00000017258	-	77	64.516	ENSPCIG00000025012	RNPS1	57	66.250	Phascolarctos_cinereus
ENSODEG00000017258	-	77	62.130	ENSPCIG00000016114	-	92	62.564	Phascolarctos_cinereus
ENSODEG00000017258	-	77	62.903	ENSPCAG00000004514	RNPS1	52	65.000	Procavia_capensis
ENSODEG00000017258	-	77	68.047	ENSPCOG00000005478	RNPS1	92	68.718	Propithecus_coquereli
ENSODEG00000017258	-	77	64.516	ENSPVAG00000005105	RNPS1	52	66.250	Pteropus_vampyrus
ENSODEG00000017258	-	77	64.516	ENSRNOG00000008703	Rnps1	52	66.250	Rattus_norvegicus
ENSODEG00000017258	-	51	64.516	ENSRBIG00000038965	-	57	65.625	Rhinopithecus_bieti
ENSODEG00000017258	-	55	64.348	ENSRBIG00000013248	-	80	63.704	Rhinopithecus_bieti
ENSODEG00000017258	-	77	68.047	ENSRROG00000041252	RNPS1	84	68.539	Rhinopithecus_roxellana
ENSODEG00000017258	-	77	68.047	ENSSBOG00000027927	RNPS1	92	68.718	Saimiri_boliviensis_boliviensis
ENSODEG00000017258	-	77	64.516	ENSSHAG00000016951	RNPS1	52	66.250	Sarcophilus_harrisii
ENSODEG00000017258	-	51	63.710	ENSSPUG00000016588	RNPS1	52	65.000	Sphenodon_punctatus
ENSODEG00000017258	-	51	64.516	ENSSSCG00000008048	RNPS1	52	66.250	Sus_scrofa
ENSODEG00000017258	-	51	63.710	ENSTGUG00000003237	RNPS1	56	65.625	Taeniopygia_guttata
ENSODEG00000017258	-	82	65.414	ENSTBEG00000009098	RNPS1	53	65.734	Tupaia_belangeri
ENSODEG00000017258	-	77	64.516	ENSTTRG00000008220	RNPS1	52	66.250	Tursiops_truncatus
ENSODEG00000017258	-	77	64.516	ENSUAMG00000004462	RNPS1	52	65.734	Ursus_americanus
ENSODEG00000017258	-	77	64.516	ENSUMAG00000022327	RNPS1	52	66.250	Ursus_maritimus
ENSODEG00000017258	-	77	64.516	ENSVVUG00000009244	RNPS1	52	66.250	Vulpes_vulpes