EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000017292 (Gene tree)
Gene ID: 101587487
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 9901 bases
Position: chrJH651638.1:7104998-7114898
Accession: 101587487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023609	TruB_N	PF01509.18	8.8e-26	1	1
ENSODEP00000023610	TruB_N	PF01509.18	9e-26	1	1
ENSODEP00000023611	TruB_N	PF01509.18	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000023882	TRUB2-203	585	-	ENSODEP00000023611	195 (aa)	-	-
ENSODET00000023881	TRUB2-202	984	XM_004640581	ENSODEP00000023610	327 (aa)	XP_004640638	UPI00033389D6
ENSODET00000023880	TRUB2-201	978	-	ENSODEP00000023609	325 (aa)	-	-

Gene Model

Click here to download ENSODEG00000017292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000017292	TRUB2	64	31.579	ENSODEG00000010854	TRUB1	59	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017292	TRUB2	99	81.288	ENSG00000167112	TRUB2	98	81.288	Homo_sapiens
ENSODEG00000017292	TRUB2	63	58.049	ENSAPOG00000015733	trub2	74	58.049	Acanthochromis_polyacanthus
ENSODEG00000017292	TRUB2	85	43.885	ENSAPOG00000018284	-	76	61.832	Acanthochromis_polyacanthus
ENSODEG00000017292	TRUB2	99	82.209	ENSAMEG00000015395	TRUB2	98	82.209	Ailuropoda_melanoleuca
ENSODEG00000017292	TRUB2	85	52.518	ENSACIG00000016500	trub2	84	52.518	Amphilophus_citrinellus
ENSODEG00000017292	TRUB2	85	57.194	ENSAOCG00000002330	trub2	82	57.194	Amphiprion_ocellaris
ENSODEG00000017292	TRUB2	85	57.554	ENSAPEG00000013177	trub2	82	57.554	Amphiprion_percula
ENSODEG00000017292	TRUB2	86	55.714	ENSATEG00000011371	trub2	88	55.714	Anabas_testudineus
ENSODEG00000017292	TRUB2	89	60.000	ENSAPLG00000009254	TRUB2	94	60.137	Anas_platyrhynchos
ENSODEG00000017292	TRUB2	90	65.068	ENSACAG00000007331	TRUB2	89	65.068	Anolis_carolinensis
ENSODEG00000017292	TRUB2	96	81.994	ENSANAG00000036234	TRUB2	100	81.994	Aotus_nancymaae
ENSODEG00000017292	TRUB2	85	54.317	ENSACLG00000010793	trub2	84	54.317	Astatotilapia_calliptera
ENSODEG00000017292	TRUB2	93	50.811	ENSAMXG00000031679	trub2	80	56.429	Astyanax_mexicanus
ENSODEG00000017292	TRUB2	53	82.081	ENSBTAG00000055269	-	78	82.081	Bos_taurus
ENSODEG00000017292	TRUB2	84	80.488	ENSBTAG00000004663	TRUB2	100	80.488	Bos_taurus
ENSODEG00000017292	TRUB2	99	81.056	ENSCJAG00000020009	TRUB2	98	80.982	Callithrix_jacchus
ENSODEG00000017292	TRUB2	99	80.368	ENSCAFG00000020068	TRUB2	98	80.368	Canis_familiaris
ENSODEG00000017292	TRUB2	91	79.661	ENSCAFG00020017325	-	99	79.661	Canis_lupus_dingo
ENSODEG00000017292	TRUB2	100	81.040	ENSCHIG00000021160	TRUB2	98	81.040	Capra_hircus
ENSODEG00000017292	TRUB2	99	82.209	ENSTSYG00000034163	TRUB2	98	82.209	Carlito_syrichta
ENSODEG00000017292	TRUB2	88	86.111	ENSCAPG00000000223	TRUB2	100	87.261	Cavia_aperea
ENSODEG00000017292	TRUB2	99	87.385	ENSCPOG00000013535	TRUB2	100	88.660	Cavia_porcellus
ENSODEG00000017292	TRUB2	98	78.125	ENSCCAG00000028463	-	96	78.165	Cebus_capucinus
ENSODEG00000017292	TRUB2	99	80.124	ENSCCAG00000026531	-	98	80.312	Cebus_capucinus
ENSODEG00000017292	TRUB2	99	82.209	ENSCATG00000038234	TRUB2	98	82.209	Cercocebus_atys
ENSODEG00000017292	TRUB2	100	87.179	ENSCLAG00000001702	TRUB2	100	87.179	Chinchilla_lanigera
ENSODEG00000017292	TRUB2	100	76.687	ENSCSAG00000014117	TRUB2	98	77.064	Chlorocebus_sabaeus
ENSODEG00000017292	TRUB2	99	82.515	ENSCHOG00000001555	TRUB2	98	82.515	Choloepus_hoffmanni
ENSODEG00000017292	TRUB2	91	63.636	ENSCPBG00000025186	TRUB2	87	63.636	Chrysemys_picta_bellii
ENSODEG00000017292	TRUB2	89	35.836	ENSCSAVG00000003930	-	90	35.836	Ciona_savignyi
ENSODEG00000017292	TRUB2	99	74.540	ENSCANG00000016135	TRUB2	98	74.540	Colobus_angolensis_palliatus
ENSODEG00000017292	TRUB2	99	79.755	ENSCGRG00001024441	Trub2	98	79.755	Cricetulus_griseus_chok1gshd
ENSODEG00000017292	TRUB2	99	79.755	ENSCGRG00000005633	Trub2	98	79.755	Cricetulus_griseus_crigri
ENSODEG00000017292	TRUB2	88	51.462	ENSCSEG00000001331	trub2	83	53.791	Cynoglossus_semilaevis
ENSODEG00000017292	TRUB2	85	55.072	ENSCVAG00000009901	trub2	83	55.072	Cyprinodon_variegatus
ENSODEG00000017292	TRUB2	96	50.265	ENSDARG00000028379	trub2	79	54.874	Danio_rerio
ENSODEG00000017292	TRUB2	100	80.923	ENSDNOG00000045679	-	98	81.595	Dasypus_novemcinctus
ENSODEG00000017292	TRUB2	98	55.590	ENSDNOG00000043967	-	96	55.590	Dasypus_novemcinctus
ENSODEG00000017292	TRUB2	98	82.500	ENSDORG00000016222	Trub2	100	82.500	Dipodomys_ordii
ENSODEG00000017292	TRUB2	85	31.295	FBgn0033060	CG7849	88	31.295	Drosophila_melanogaster
ENSODEG00000017292	TRUB2	100	78.116	ENSETEG00000009114	TRUB2	99	78.116	Echinops_telfairi
ENSODEG00000017292	TRUB2	74	48.780	ENSEBUG00000015723	trub2	84	48.780	Eptatretus_burgeri
ENSODEG00000017292	TRUB2	99	82.209	ENSEASG00005016819	TRUB2	98	82.209	Equus_asinus_asinus
ENSODEG00000017292	TRUB2	99	82.209	ENSECAG00000023520	TRUB2	98	82.209	Equus_caballus
ENSODEG00000017292	TRUB2	95	83.442	ENSEEUG00000008908	TRUB2	94	83.442	Erinaceus_europaeus
ENSODEG00000017292	TRUB2	85	54.296	ENSELUG00000002376	trub2	91	54.296	Esox_lucius
ENSODEG00000017292	TRUB2	99	80.183	ENSFCAG00000005839	TRUB2	98	81.388	Felis_catus
ENSODEG00000017292	TRUB2	81	63.258	ENSFALG00000001364	TRUB2	82	64.822	Ficedula_albicollis
ENSODEG00000017292	TRUB2	99	85.583	ENSFDAG00000021374	TRUB2	100	85.052	Fukomys_damarensis
ENSODEG00000017292	TRUB2	85	51.799	ENSFHEG00000014655	trub2	82	51.799	Fundulus_heteroclitus
ENSODEG00000017292	TRUB2	82	47.744	ENSGMOG00000000981	trub2	88	47.744	Gadus_morhua
ENSODEG00000017292	TRUB2	93	61.184	ENSGALG00000004920	TRUB2	75	61.184	Gallus_gallus
ENSODEG00000017292	TRUB2	85	55.755	ENSGAFG00000010107	trub2	93	51.899	Gambusia_affinis
ENSODEG00000017292	TRUB2	85	55.755	ENSGACG00000001476	trub2	84	55.755	Gasterosteus_aculeatus
ENSODEG00000017292	TRUB2	89	65.517	ENSGAGG00000022872	TRUB2	86	65.517	Gopherus_agassizii
ENSODEG00000017292	TRUB2	99	81.902	ENSGGOG00000014780	TRUB2	98	81.902	Gorilla_gorilla
ENSODEG00000017292	TRUB2	85	55.036	ENSHBUG00000022384	trub2	84	55.036	Haplochromis_burtoni
ENSODEG00000017292	TRUB2	99	84.356	ENSHGLG00000016715	TRUB2	98	84.356	Heterocephalus_glaber_female
ENSODEG00000017292	TRUB2	99	84.356	ENSHGLG00100016548	TRUB2	98	84.356	Heterocephalus_glaber_male
ENSODEG00000017292	TRUB2	89	53.448	ENSHCOG00000017748	trub2	85	56.835	Hippocampus_comes
ENSODEG00000017292	TRUB2	92	53.821	ENSIPUG00000017725	hdhd3	52	53.821	Ictalurus_punctatus
ENSODEG00000017292	TRUB2	99	80.247	ENSSTOG00000008024	-	98	80.247	Ictidomys_tridecemlineatus
ENSODEG00000017292	TRUB2	98	81.250	ENSSTOG00000022617	-	98	81.250	Ictidomys_tridecemlineatus
ENSODEG00000017292	TRUB2	98	73.832	ENSJJAG00000019181	Trub2	97	73.832	Jaculus_jaculus
ENSODEG00000017292	TRUB2	85	54.152	ENSKMAG00000007861	trub2	83	54.152	Kryptolebias_marmoratus
ENSODEG00000017292	TRUB2	98	50.000	ENSLBEG00000000907	trub2	96	50.000	Labrus_bergylta
ENSODEG00000017292	TRUB2	88	63.287	ENSLACG00000001515	TRUB2	85	63.287	Latimeria_chalumnae
ENSODEG00000017292	TRUB2	91	58.804	ENSLOCG00000000885	trub2	99	58.804	Lepisosteus_oculatus
ENSODEG00000017292	TRUB2	93	83.828	ENSLAFG00000002174	TRUB2	100	83.828	Loxodonta_africana
ENSODEG00000017292	TRUB2	99	81.538	ENSMFAG00000000881	TRUB2	98	81.538	Macaca_fascicularis
ENSODEG00000017292	TRUB2	99	81.538	ENSMMUG00000014146	TRUB2	98	81.538	Macaca_mulatta
ENSODEG00000017292	TRUB2	99	81.231	ENSMNEG00000011189	TRUB2	98	81.231	Macaca_nemestrina
ENSODEG00000017292	TRUB2	99	82.209	ENSMLEG00000037270	TRUB2	98	82.209	Mandrillus_leucophaeus
ENSODEG00000017292	TRUB2	92	49.180	ENSMAMG00000023643	trub2	92	55.036	Mastacembelus_armatus
ENSODEG00000017292	TRUB2	85	54.676	ENSMZEG00005016018	trub2	84	54.676	Maylandia_zebra
ENSODEG00000017292	TRUB2	61	66.332	ENSMGAG00000003894	TRUB2	99	66.332	Meleagris_gallopavo
ENSODEG00000017292	TRUB2	99	81.595	ENSMAUG00000010403	Trub2	100	80.928	Mesocricetus_auratus
ENSODEG00000017292	TRUB2	99	80.368	ENSMICG00000047032	TRUB2	98	80.368	Microcebus_murinus
ENSODEG00000017292	TRUB2	92	84.950	ENSMOCG00000014291	Trub2	99	84.950	Microtus_ochrogaster
ENSODEG00000017292	TRUB2	96	50.265	ENSMMOG00000021674	trub2	86	56.475	Mola_mola
ENSODEG00000017292	TRUB2	90	72.945	ENSMODG00000005940	TRUB2	99	72.945	Monodelphis_domestica
ENSODEG00000017292	TRUB2	85	55.872	ENSMALG00000021231	trub2	83	55.872	Monopterus_albus
ENSODEG00000017292	TRUB2	99	80.368	MGP_CAROLIEiJ_G0023368	Trub2	100	80.928	Mus_caroli
ENSODEG00000017292	TRUB2	99	80.982	ENSMUSG00000039826	Trub2	100	82.474	Mus_musculus
ENSODEG00000017292	TRUB2	99	82.990	MGP_PahariEiJ_G0024826	Trub2	100	82.990	Mus_pahari
ENSODEG00000017292	TRUB2	99	82.474	MGP_SPRETEiJ_G0024286	Trub2	100	82.474	Mus_spretus
ENSODEG00000017292	TRUB2	99	79.755	ENSMPUG00000013206	TRUB2	89	79.755	Mustela_putorius_furo
ENSODEG00000017292	TRUB2	99	81.988	ENSMLUG00000005256	TRUB2	97	81.988	Myotis_lucifugus
ENSODEG00000017292	TRUB2	99	80.368	ENSNGAG00000018679	Trub2	98	80.368	Nannospalax_galili
ENSODEG00000017292	TRUB2	85	54.317	ENSNBRG00000016294	trub2	84	54.317	Neolamprologus_brichardi
ENSODEG00000017292	TRUB2	99	80.368	ENSNLEG00000017556	TRUB2	98	80.368	Nomascus_leucogenys
ENSODEG00000017292	TRUB2	91	73.649	ENSMEUG00000000484	TRUB2	95	73.649	Notamacropus_eugenii
ENSODEG00000017292	TRUB2	99	77.914	ENSOPRG00000001981	TRUB2	99	77.914	Ochotona_princeps
ENSODEG00000017292	TRUB2	85	54.317	ENSONIG00000004230	trub2	84	54.317	Oreochromis_niloticus
ENSODEG00000017292	TRUB2	76	74.324	ENSOANG00000029023	-	83	75.401	Ornithorhynchus_anatinus
ENSODEG00000017292	TRUB2	99	80.556	ENSOCUG00000026296	TRUB2	89	80.675	Oryctolagus_cuniculus
ENSODEG00000017292	TRUB2	91	51.007	ENSORLG00000020011	trub2	89	51.678	Oryzias_latipes
ENSODEG00000017292	TRUB2	91	51.515	ENSORLG00020011028	trub2	86	51.515	Oryzias_latipes_hni
ENSODEG00000017292	TRUB2	91	51.515	ENSORLG00015007494	trub2	90	51.515	Oryzias_latipes_hsok
ENSODEG00000017292	TRUB2	85	56.475	ENSOMEG00000006702	trub2	84	56.475	Oryzias_melastigma
ENSODEG00000017292	TRUB2	80	77.564	ENSOGAG00000003511	-	95	77.564	Otolemur_garnettii
ENSODEG00000017292	TRUB2	100	81.346	ENSOARG00000010579	-	98	81.346	Ovis_aries
ENSODEG00000017292	TRUB2	76	78.226	ENSOARG00000003785	-	98	78.226	Ovis_aries
ENSODEG00000017292	TRUB2	99	81.902	ENSPPAG00000043146	TRUB2	98	81.902	Pan_paniscus
ENSODEG00000017292	TRUB2	99	80.183	ENSPPRG00000006307	TRUB2	98	81.388	Panthera_pardus
ENSODEG00000017292	TRUB2	99	79.878	ENSPTIG00000012366	TRUB2	98	81.073	Panthera_tigris_altaica
ENSODEG00000017292	TRUB2	99	81.595	ENSPTRG00000052151	-	98	81.595	Pan_troglodytes
ENSODEG00000017292	TRUB2	99	81.595	ENSPTRG00000021423	TRUB2	98	81.595	Pan_troglodytes
ENSODEG00000017292	TRUB2	99	82.209	ENSPANG00000025856	TRUB2	98	82.209	Papio_anubis
ENSODEG00000017292	TRUB2	85	53.986	ENSPKIG00000019769	trub2	90	53.986	Paramormyrops_kingsleyae
ENSODEG00000017292	TRUB2	91	59.933	ENSPSIG00000015701	TRUB2	99	59.933	Pelodiscus_sinensis
ENSODEG00000017292	TRUB2	91	50.000	ENSPMGG00000010206	trub2	90	51.557	Periophthalmus_magnuspinnatus
ENSODEG00000017292	TRUB2	99	81.040	ENSPEMG00000017893	Trub2	98	81.040	Peromyscus_maniculatus_bairdii
ENSODEG00000017292	TRUB2	96	71.154	ENSPCIG00000026731	TRUB2	99	71.154	Phascolarctos_cinereus
ENSODEG00000017292	TRUB2	85	55.396	ENSPFOG00000018018	trub2	78	53.512	Poecilia_formosa
ENSODEG00000017292	TRUB2	85	55.396	ENSPLAG00000010484	trub2	85	53.512	Poecilia_latipinna
ENSODEG00000017292	TRUB2	92	53.512	ENSPMEG00000012913	trub2	88	53.512	Poecilia_mexicana
ENSODEG00000017292	TRUB2	88	51.744	ENSPREG00000002549	trub2	87	52.349	Poecilia_reticulata
ENSODEG00000017292	TRUB2	100	80.308	ENSPPYG00000019650	TRUB2	100	80.675	Pongo_abelii
ENSODEG00000017292	TRUB2	97	82.278	ENSPCAG00000015068	TRUB2	96	82.278	Procavia_capensis
ENSODEG00000017292	TRUB2	99	81.902	ENSPCOG00000017100	TRUB2	98	81.902	Propithecus_coquereli
ENSODEG00000017292	TRUB2	91	81.544	ENSPVAG00000001224	TRUB2	100	81.544	Pteropus_vampyrus
ENSODEG00000017292	TRUB2	85	54.676	ENSPNYG00000013666	trub2	84	54.676	Pundamilia_nyererei
ENSODEG00000017292	TRUB2	93	51.351	ENSPNAG00000017292	trub2	80	55.914	Pygocentrus_nattereri
ENSODEG00000017292	TRUB2	99	79.876	ENSRNOG00000043189	Trub2	100	79.876	Rattus_norvegicus
ENSODEG00000017292	TRUB2	99	74.540	ENSRBIG00000006965	TRUB2	98	74.540	Rhinopithecus_bieti
ENSODEG00000017292	TRUB2	99	82.209	ENSRROG00000042928	TRUB2	98	82.209	Rhinopithecus_roxellana
ENSODEG00000017292	TRUB2	99	81.288	ENSSBOG00000022439	TRUB2	98	81.288	Saimiri_boliviensis_boliviensis
ENSODEG00000017292	TRUB2	86	56.115	ENSSFOG00015013391	trub2	89	56.115	Scleropages_formosus
ENSODEG00000017292	TRUB2	87	55.556	ENSSMAG00000020820	trub2	84	57.554	Scophthalmus_maximus
ENSODEG00000017292	TRUB2	85	55.036	ENSSDUG00000016928	trub2	90	52.649	Seriola_dumerili
ENSODEG00000017292	TRUB2	85	56.115	ENSSLDG00000024701	trub2	90	53.642	Seriola_lalandi_dorsalis
ENSODEG00000017292	TRUB2	92	62.000	ENSSPUG00000015515	TRUB2	90	62.000	Sphenodon_punctatus
ENSODEG00000017292	TRUB2	85	58.993	ENSSPAG00000017865	trub2	84	58.993	Stegastes_partitus
ENSODEG00000017292	TRUB2	99	82.716	ENSSSCG00000005645	TRUB2	97	81.597	Sus_scrofa
ENSODEG00000017292	TRUB2	80	64.368	ENSTGUG00000003704	TRUB2	99	64.368	Taeniopygia_guttata
ENSODEG00000017292	TRUB2	97	46.597	ENSTRUG00000015499	trub2	86	54.286	Takifugu_rubripes
ENSODEG00000017292	TRUB2	97	48.168	ENSTNIG00000014721	trub2	96	54.839	Tetraodon_nigroviridis
ENSODEG00000017292	TRUB2	67	78.636	ENSTBEG00000000586	TRUB2	98	78.636	Tupaia_belangeri
ENSODEG00000017292	TRUB2	99	76.994	ENSTTRG00000016486	TRUB2	98	76.994	Tursiops_truncatus
ENSODEG00000017292	TRUB2	99	82.822	ENSUAMG00000020276	TRUB2	95	82.822	Ursus_americanus
ENSODEG00000017292	TRUB2	99	82.822	ENSUMAG00000022051	TRUB2	95	82.822	Ursus_maritimus
ENSODEG00000017292	TRUB2	91	70.621	ENSVPAG00000005793	TRUB2	99	63.924	Vicugna_pacos
ENSODEG00000017292	TRUB2	92	83.333	ENSVVUG00000013451	TRUB2	86	83.333	Vulpes_vulpes
ENSODEG00000017292	TRUB2	96	59.554	ENSXETG00000003973	trub2	97	59.554	Xenopus_tropicalis
ENSODEG00000017292	TRUB2	87	53.529	ENSXCOG00000008759	trub2	88	53.378	Xiphophorus_couchianus
ENSODEG00000017292	TRUB2	87	52.941	ENSXMAG00000015478	trub2	88	53.041	Xiphophorus_maculatus