EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000017499 (Gene tree)
Gene ID: 101568813
Gene Symbol: SNRNP70
Alias: RNPU1Z|RPU1|SNRP70|Snp1|U1-70K
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 17175 bases
Position: chrJH651783.1:1603527-1620701
Accession: 101568813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000023912	RRM_1	PF00076.22	5.9e-18	1	1
ENSODEP00000023912	U1snRNP70_N	PF12220.8	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024184	SNRNP70-201	1387	XM_004646461	ENSODEP00000023912	460 (aa)	XP_004646518	UPI000333F4FB

Gene Model

Click here to download ENSODEG00000017499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017499's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017499	SNRNP70	100	93.290	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSODEG00000017499	SNRNP70	100	91.974	ENSAMEG00000014468	SNRNP70	100	91.974	Ailuropoda_melanoleuca
ENSODEG00000017499	SNRNP70	100	90.476	ENSANAG00000036787	SNRNP70	99	97.561	Aotus_nancymaae
ENSODEG00000017499	SNRNP70	100	92.857	ENSCJAG00000000193	SNRNP70	99	98.814	Callithrix_jacchus
ENSODEG00000017499	SNRNP70	100	94.348	ENSCAFG00000003711	SNRNP70	99	97.561	Canis_familiaris
ENSODEG00000017499	SNRNP70	100	92.857	ENSCAFG00020025470	SNRNP70	100	92.857	Canis_lupus_dingo
ENSODEG00000017499	SNRNP70	100	95.217	ENSCPOG00000019589	SNRNP70	100	95.217	Cavia_porcellus
ENSODEG00000017499	SNRNP70	89	92.494	ENSCCAG00000036551	SNRNP70	100	92.494	Cebus_capucinus
ENSODEG00000017499	SNRNP70	100	93.290	ENSCATG00000016149	SNRNP70	100	93.290	Cercocebus_atys
ENSODEG00000017499	SNRNP70	100	95.000	ENSCLAG00000007991	SNRNP70	100	95.000	Chinchilla_lanigera
ENSODEG00000017499	SNRNP70	100	91.342	ENSCSAG00000002759	SNRNP70	100	91.342	Chlorocebus_sabaeus
ENSODEG00000017499	SNRNP70	100	93.089	ENSCANG00000036607	SNRNP70	99	99.187	Colobus_angolensis_palliatus
ENSODEG00000017499	SNRNP70	100	95.000	ENSCGRG00001020676	Snrnp70	100	95.000	Cricetulus_griseus_chok1gshd
ENSODEG00000017499	SNRNP70	100	95.000	ENSCGRG00000018048	Snrnp70	100	95.000	Cricetulus_griseus_crigri
ENSODEG00000017499	SNRNP70	100	93.492	ENSDORG00000010228	Snrnp70	100	93.492	Dipodomys_ordii
ENSODEG00000017499	SNRNP70	100	94.348	ENSEASG00005004917	SNRNP70	100	94.348	Equus_asinus_asinus
ENSODEG00000017499	SNRNP70	50	77.391	ENSEEUG00000005666	SNRNP70	53	77.391	Erinaceus_europaeus
ENSODEG00000017499	SNRNP70	50	100.000	ENSFCAG00000042603	SNRNP70	55	100.000	Felis_catus
ENSODEG00000017499	SNRNP70	58	100.000	ENSFDAG00000013830	SNRNP70	95	97.531	Fukomys_damarensis
ENSODEG00000017499	SNRNP70	100	93.290	ENSGGOG00000008245	SNRNP70	99	97.561	Gorilla_gorilla
ENSODEG00000017499	SNRNP70	100	93.696	ENSJJAG00000002614	Snrnp70	100	93.696	Jaculus_jaculus
ENSODEG00000017499	SNRNP70	50	100.000	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSODEG00000017499	SNRNP70	100	93.290	ENSMFAG00000039824	SNRNP70	100	93.290	Macaca_fascicularis
ENSODEG00000017499	SNRNP70	100	91.342	ENSMMUG00000004928	SNRNP70	99	97.561	Macaca_mulatta
ENSODEG00000017499	SNRNP70	100	90.909	ENSMNEG00000038057	SNRNP70	100	90.909	Macaca_nemestrina
ENSODEG00000017499	SNRNP70	100	93.290	ENSMLEG00000030967	SNRNP70	100	93.290	Mandrillus_leucophaeus
ENSODEG00000017499	SNRNP70	100	94.783	ENSMAUG00000020970	Snrnp70	100	94.783	Mesocricetus_auratus
ENSODEG00000017499	SNRNP70	100	94.348	ENSMICG00000038437	SNRNP70	100	99.190	Microcebus_murinus
ENSODEG00000017499	SNRNP70	100	95.217	ENSMOCG00000012825	Snrnp70	100	95.217	Microtus_ochrogaster
ENSODEG00000017499	SNRNP70	100	96.522	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSODEG00000017499	SNRNP70	100	95.000	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSODEG00000017499	SNRNP70	100	94.783	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSODEG00000017499	SNRNP70	100	95.000	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSODEG00000017499	SNRNP70	100	94.130	ENSMPUG00000003258	SNRNP70	100	94.130	Mustela_putorius_furo
ENSODEG00000017499	SNRNP70	100	94.130	ENSMLUG00000011766	SNRNP70	100	94.130	Myotis_lucifugus
ENSODEG00000017499	SNRNP70	100	95.000	ENSNGAG00000021191	Snrnp70	100	95.000	Nannospalax_galili
ENSODEG00000017499	SNRNP70	99	93.202	ENSNLEG00000004899	SNRNP70	98	98.770	Nomascus_leucogenys
ENSODEG00000017499	SNRNP70	50	100.000	ENSOCUG00000015081	SNRNP70	50	100.000	Oryctolagus_cuniculus
ENSODEG00000017499	SNRNP70	100	93.926	ENSOGAG00000029310	SNRNP70	100	93.926	Otolemur_garnettii
ENSODEG00000017499	SNRNP70	73	100.000	ENSOARG00000012608	SNRNP70	93	100.000	Ovis_aries
ENSODEG00000017499	SNRNP70	100	93.290	ENSPPAG00000035067	SNRNP70	99	100.000	Pan_paniscus
ENSODEG00000017499	SNRNP70	100	94.130	ENSPPRG00000005579	SNRNP70	100	94.130	Panthera_pardus
ENSODEG00000017499	SNRNP70	100	93.290	ENSPTRG00000011277	SNRNP70	100	99.602	Pan_troglodytes
ENSODEG00000017499	SNRNP70	100	93.290	ENSPANG00000004068	SNRNP70	100	93.290	Papio_anubis
ENSODEG00000017499	SNRNP70	50	86.957	ENSPSIG00000015251	SNRNP70	90	85.217	Pelodiscus_sinensis
ENSODEG00000017499	SNRNP70	100	95.652	ENSPEMG00000019011	Snrnp70	100	95.652	Peromyscus_maniculatus_bairdii
ENSODEG00000017499	SNRNP70	100	92.857	ENSPPYG00000010234	SNRNP70	100	92.857	Pongo_abelii
ENSODEG00000017499	SNRNP70	50	91.739	ENSPCOG00000023103	SNRNP70	82	91.739	Propithecus_coquereli
ENSODEG00000017499	SNRNP70	100	91.304	ENSPVAG00000009578	SNRNP70	100	91.304	Pteropus_vampyrus
ENSODEG00000017499	SNRNP70	100	93.074	ENSRBIG00000042387	SNRNP70	100	93.074	Rhinopithecus_bieti
ENSODEG00000017499	SNRNP70	100	93.290	ENSRROG00000033636	SNRNP70	100	93.290	Rhinopithecus_roxellana
ENSODEG00000017499	SNRNP70	100	93.290	ENSSBOG00000020026	SNRNP70	99	97.561	Saimiri_boliviensis_boliviensis
ENSODEG00000017499	SNRNP70	100	93.275	ENSTTRG00000017099	SNRNP70	100	93.275	Tursiops_truncatus
ENSODEG00000017499	SNRNP70	100	94.130	ENSUAMG00000016147	SNRNP70	100	94.130	Ursus_americanus
ENSODEG00000017499	SNRNP70	56	98.833	ENSUMAG00000001467	SNRNP70	99	97.561	Ursus_maritimus
ENSODEG00000017499	SNRNP70	100	94.130	ENSVVUG00000022976	SNRNP70	99	97.561	Vulpes_vulpes
ENSODEG00000017499	SNRNP70	57	86.538	ENSXETG00000022919	snrnp70	57	95.595	Xenopus_tropicalis