EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000017664 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor SYF2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1714 bases
Position: chrJH651525.1:27696317-27698030
Accession: 101585254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024137	SYF2	PF08231.12	1.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024411	-	717	XM_012513469	ENSODEP00000024137	238 (aa)	XP_012368923	-

Gene Model

Click here to download ENSODEG00000017664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000017664	-	100	85.294	ENSODEG00000014338	-	99	85.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017664	-	98	94.850	ENSG00000117614	SYF2	96	94.850	Homo_sapiens
ENSODEG00000017664	-	93	82.883	ENSAPOG00000001174	syf2	97	80.952	Acanthochromis_polyacanthus
ENSODEG00000017664	-	98	92.340	ENSAMEG00000010115	-	97	92.766	Ailuropoda_melanoleuca
ENSODEG00000017664	-	82	96.410	ENSAMEG00000010134	-	100	96.410	Ailuropoda_melanoleuca
ENSODEG00000017664	-	93	80.180	ENSACIG00000023688	syf2	89	80.180	Amphilophus_citrinellus
ENSODEG00000017664	-	99	78.099	ENSAOCG00000022046	syf2	98	81.385	Amphiprion_ocellaris
ENSODEG00000017664	-	86	81.951	ENSAOCG00000010912	syf2	64	81.951	Amphiprion_ocellaris
ENSODEG00000017664	-	99	78.099	ENSAPEG00000018858	syf2	93	78.099	Amphiprion_percula
ENSODEG00000017664	-	91	82.028	ENSATEG00000007745	syf2	97	79.221	Anabas_testudineus
ENSODEG00000017664	-	84	88.000	ENSAPLG00000016435	SYF2	99	88.000	Anas_platyrhynchos
ENSODEG00000017664	-	70	75.449	ENSACAG00000026777	-	94	75.796	Anolis_carolinensis
ENSODEG00000017664	-	86	84.804	ENSACAG00000013653	-	100	84.804	Anolis_carolinensis
ENSODEG00000017664	-	98	94.850	ENSANAG00000032473	SYF2	96	94.850	Aotus_nancymaae
ENSODEG00000017664	-	93	79.730	ENSACLG00000019916	syf2	98	76.923	Astatotilapia_calliptera
ENSODEG00000017664	-	93	81.081	ENSAMXG00000004051	syf2	93	81.081	Astyanax_mexicanus
ENSODEG00000017664	-	96	94.760	ENSBTAG00000001651	SYF2	97	94.760	Bos_taurus
ENSODEG00000017664	-	87	50.000	WBGene00019402	syf-2	99	46.983	Caenorhabditis_elegans
ENSODEG00000017664	-	98	95.279	ENSCJAG00000046570	SYF2	96	95.279	Callithrix_jacchus
ENSODEG00000017664	-	99	89.388	ENSCAFG00000012895	-	96	92.766	Canis_familiaris
ENSODEG00000017664	-	94	86.607	ENSCAFG00000030331	-	96	86.607	Canis_familiaris
ENSODEG00000017664	-	99	89.388	ENSCAFG00020021091	-	96	92.766	Canis_lupus_dingo
ENSODEG00000017664	-	76	88.462	ENSCAFG00020021094	-	83	96.795	Canis_lupus_dingo
ENSODEG00000017664	-	99	93.644	ENSCHIG00000020874	SYF2	98	93.644	Capra_hircus
ENSODEG00000017664	-	99	92.340	ENSTSYG00000005114	SYF2	97	92.340	Carlito_syrichta
ENSODEG00000017664	-	83	97.475	ENSCAPG00000010006	SYF2	100	97.475	Cavia_aperea
ENSODEG00000017664	-	100	94.118	ENSCPOG00000005326	SYF2	98	94.118	Cavia_porcellus
ENSODEG00000017664	-	98	95.279	ENSCCAG00000022459	SYF2	96	95.279	Cebus_capucinus
ENSODEG00000017664	-	98	94.421	ENSCATG00000026917	SYF2	96	94.421	Cercocebus_atys
ENSODEG00000017664	-	100	95.798	ENSCLAG00000008474	SYF2	98	95.798	Chinchilla_lanigera
ENSODEG00000017664	-	98	94.421	ENSCSAG00000000948	SYF2	96	94.421	Chlorocebus_sabaeus
ENSODEG00000017664	-	71	79.290	ENSCHOG00000005273	-	96	77.586	Choloepus_hoffmanni
ENSODEG00000017664	-	94	88.393	ENSCPBG00000025073	SYF2	92	86.900	Chrysemys_picta_bellii
ENSODEG00000017664	-	89	52.582	ENSCING00000003017	-	89	52.582	Ciona_intestinalis
ENSODEG00000017664	-	89	50.233	ENSCSAVG00000006627	-	97	50.704	Ciona_savignyi
ENSODEG00000017664	-	98	81.116	ENSCANG00000037322	SYF2	95	81.116	Colobus_angolensis_palliatus
ENSODEG00000017664	-	94	94.196	ENSCGRG00001020733	Syf2	93	94.196	Cricetulus_griseus_chok1gshd
ENSODEG00000017664	-	82	95.897	ENSCGRG00000005095	Syf2	96	95.455	Cricetulus_griseus_crigri
ENSODEG00000017664	-	92	77.523	ENSCSEG00000000117	syf2	99	72.689	Cynoglossus_semilaevis
ENSODEG00000017664	-	93	80.543	ENSCVAG00000019543	syf2	98	77.447	Cyprinodon_variegatus
ENSODEG00000017664	-	100	76.891	ENSDARG00000004706	syf2	100	76.891	Danio_rerio
ENSODEG00000017664	-	96	94.323	ENSDNOG00000047605	SYF2	93	94.323	Dasypus_novemcinctus
ENSODEG00000017664	-	100	91.597	ENSDORG00000001274	Syf2	98	91.597	Dipodomys_ordii
ENSODEG00000017664	-	92	56.818	FBgn0033556	CG12343	97	56.818	Drosophila_melanogaster
ENSODEG00000017664	-	90	77.209	ENSETEG00000015729	SYF2	94	77.209	Echinops_telfairi
ENSODEG00000017664	-	83	59.391	ENSEBUG00000015402	syf2	95	59.391	Eptatretus_burgeri
ENSODEG00000017664	-	96	94.323	ENSEASG00005004224	-	93	94.323	Equus_asinus_asinus
ENSODEG00000017664	-	98	82.403	ENSEASG00005004232	-	96	82.403	Equus_asinus_asinus
ENSODEG00000017664	-	96	94.323	ENSECAG00000010440	-	96	94.323	Equus_caballus
ENSODEG00000017664	-	96	95.633	ENSECAG00000012023	-	93	95.633	Equus_caballus
ENSODEG00000017664	-	71	82.738	ENSEEUG00000015084	SYF2	92	82.738	Erinaceus_europaeus
ENSODEG00000017664	-	96	82.456	ENSELUG00000003465	syf2	95	82.456	Esox_lucius
ENSODEG00000017664	-	98	93.617	ENSFCAG00000010324	-	81	93.617	Felis_catus
ENSODEG00000017664	-	98	93.191	ENSFCAG00000043095	-	96	93.191	Felis_catus
ENSODEG00000017664	-	86	85.784	ENSFALG00000000460	SYF2	92	81.739	Ficedula_albicollis
ENSODEG00000017664	-	99	95.745	ENSFDAG00000008310	SYF2	97	95.745	Fukomys_damarensis
ENSODEG00000017664	-	94	65.625	ENSFHEG00000007238	syf2	99	65.625	Fundulus_heteroclitus
ENSODEG00000017664	-	92	82.110	ENSGMOG00000019138	syf2	96	83.256	Gadus_morhua
ENSODEG00000017664	-	94	87.054	ENSGALG00000013639	SYF2	95	82.917	Gallus_gallus
ENSODEG00000017664	-	93	77.928	ENSGAFG00000019435	syf2	100	73.529	Gambusia_affinis
ENSODEG00000017664	-	90	82.326	ENSGACG00000007305	syf2	90	82.326	Gasterosteus_aculeatus
ENSODEG00000017664	-	94	88.839	ENSGAGG00000010670	SYF2	92	87.336	Gopherus_agassizii
ENSODEG00000017664	-	98	95.279	ENSGGOG00000012796	SYF2	96	95.279	Gorilla_gorilla
ENSODEG00000017664	-	93	79.730	ENSHBUG00000020477	syf2	98	76.923	Haplochromis_burtoni
ENSODEG00000017664	-	95	83.700	ENSHGLG00000004304	-	100	79.412	Heterocephalus_glaber_female
ENSODEG00000017664	-	99	95.319	ENSHGLG00000014393	SYF2	98	94.118	Heterocephalus_glaber_female
ENSODEG00000017664	-	99	95.319	ENSHGLG00100014722	SYF2	98	94.118	Heterocephalus_glaber_male
ENSODEG00000017664	-	93	81.081	ENSHCOG00000012904	syf2	73	81.081	Hippocampus_comes
ENSODEG00000017664	-	92	82.727	ENSIPUG00000019859	syf2	92	82.727	Ictalurus_punctatus
ENSODEG00000017664	-	61	97.260	ENSSTOG00000023984	SYF2	100	97.260	Ictidomys_tridecemlineatus
ENSODEG00000017664	-	84	96.985	ENSJJAG00000013301	Syf2	94	96.985	Jaculus_jaculus
ENSODEG00000017664	-	95	78.696	ENSKMAG00000013856	syf2	97	78.696	Kryptolebias_marmoratus
ENSODEG00000017664	-	92	82.192	ENSLBEG00000014425	syf2	94	81.166	Labrus_bergylta
ENSODEG00000017664	-	94	83.929	ENSLACG00000012064	SYF2	92	83.929	Latimeria_chalumnae
ENSODEG00000017664	-	100	79.832	ENSLOCG00000002728	syf2	93	79.832	Lepisosteus_oculatus
ENSODEG00000017664	-	77	65.217	ENSLAFG00000030814	-	100	65.217	Loxodonta_africana
ENSODEG00000017664	-	98	93.162	ENSLAFG00000023150	-	96	93.162	Loxodonta_africana
ENSODEG00000017664	-	98	94.850	ENSMFAG00000041831	SYF2	96	94.850	Macaca_fascicularis
ENSODEG00000017664	-	98	94.421	ENSMMUG00000002968	SYF2	96	94.421	Macaca_mulatta
ENSODEG00000017664	-	98	94.850	ENSMNEG00000030180	SYF2	96	94.850	Macaca_nemestrina
ENSODEG00000017664	-	98	94.421	ENSMLEG00000030248	SYF2	96	94.421	Mandrillus_leucophaeus
ENSODEG00000017664	-	91	80.645	ENSMAMG00000010403	syf2	97	76.371	Mastacembelus_armatus
ENSODEG00000017664	-	96	77.682	ENSMZEG00005006429	syf2	98	77.682	Maylandia_zebra
ENSODEG00000017664	-	84	88.442	ENSMGAG00000002019	SYF2	100	88.442	Meleagris_gallopavo
ENSODEG00000017664	-	98	90.678	ENSMAUG00000018974	Syf2	98	90.678	Mesocricetus_auratus
ENSODEG00000017664	-	84	96.985	ENSMICG00000016191	SYF2	100	96.985	Microcebus_murinus
ENSODEG00000017664	-	98	93.133	ENSMOCG00000022938	Syf2	96	93.133	Microtus_ochrogaster
ENSODEG00000017664	-	93	78.378	ENSMMOG00000002396	syf2	93	78.378	Mola_mola
ENSODEG00000017664	-	95	87.225	ENSMODG00000013951	-	99	87.225	Monodelphis_domestica
ENSODEG00000017664	-	93	81.166	ENSMALG00000010706	syf2	93	81.614	Monopterus_albus
ENSODEG00000017664	-	98	91.102	MGP_CAROLIEiJ_G0026633	Syf2	98	91.102	Mus_caroli
ENSODEG00000017664	-	98	91.102	ENSMUSG00000028821	Syf2	98	91.102	Mus_musculus
ENSODEG00000017664	-	98	91.102	MGP_PahariEiJ_G0028966	Syf2	98	91.102	Mus_pahari
ENSODEG00000017664	-	98	91.102	MGP_SPRETEiJ_G0027613	Syf2	98	91.102	Mus_spretus
ENSODEG00000017664	-	99	89.796	ENSMPUG00000015802	-	96	92.766	Mustela_putorius_furo
ENSODEG00000017664	-	98	91.915	ENSMPUG00000015801	-	96	91.915	Mustela_putorius_furo
ENSODEG00000017664	-	96	93.886	ENSMLUG00000001885	SYF2	94	93.886	Myotis_lucifugus
ENSODEG00000017664	-	99	94.068	ENSNGAG00000007912	Syf2	96	94.068	Nannospalax_galili
ENSODEG00000017664	-	97	71.186	ENSNBRG00000010720	syf2	99	71.186	Neolamprologus_brichardi
ENSODEG00000017664	-	98	95.279	ENSNLEG00000035185	SYF2	96	95.279	Nomascus_leucogenys
ENSODEG00000017664	-	97	92.672	ENSOPRG00000012870	SYF2	95	92.672	Ochotona_princeps
ENSODEG00000017664	-	93	79.730	ENSONIG00000008213	syf2	98	76.923	Oreochromis_niloticus
ENSODEG00000017664	-	85	90.099	ENSOANG00000009552	SYF2	100	90.099	Ornithorhynchus_anatinus
ENSODEG00000017664	-	100	93.697	ENSOCUG00000013050	SYF2	98	93.697	Oryctolagus_cuniculus
ENSODEG00000017664	-	95	79.295	ENSORLG00000028820	syf2	97	79.295	Oryzias_latipes
ENSODEG00000017664	-	100	77.311	ENSORLG00020018333	syf2	97	77.311	Oryzias_latipes_hni
ENSODEG00000017664	-	100	77.311	ENSORLG00015014665	syf2	97	77.311	Oryzias_latipes_hsok
ENSODEG00000017664	-	100	78.151	ENSOMEG00000013911	syf2	97	78.151	Oryzias_melastigma
ENSODEG00000017664	-	98	94.850	ENSOGAG00000009962	SYF2	95	94.850	Otolemur_garnettii
ENSODEG00000017664	-	82	66.667	ENSOARG00000006269	-	100	66.667	Ovis_aries
ENSODEG00000017664	-	96	94.372	ENSOARG00000006348	-	94	94.372	Ovis_aries
ENSODEG00000017664	-	98	95.279	ENSPPAG00000036579	SYF2	96	95.279	Pan_paniscus
ENSODEG00000017664	-	99	92.857	ENSPPRG00000001638	-	97	92.857	Panthera_pardus
ENSODEG00000017664	-	98	93.191	ENSPPRG00000001651	-	96	93.191	Panthera_pardus
ENSODEG00000017664	-	91	97.685	ENSPTIG00000005711	-	82	95.133	Panthera_tigris_altaica
ENSODEG00000017664	-	98	93.191	ENSPTIG00000007036	-	96	93.191	Panthera_tigris_altaica
ENSODEG00000017664	-	98	95.279	ENSPTRG00000000352	SYF2	96	95.279	Pan_troglodytes
ENSODEG00000017664	-	98	94.850	ENSPANG00000008139	SYF2	96	94.850	Papio_anubis
ENSODEG00000017664	-	95	80.617	ENSPKIG00000008130	syf2	97	80.617	Paramormyrops_kingsleyae
ENSODEG00000017664	-	96	86.026	ENSPSIG00000011816	SYF2	89	86.026	Pelodiscus_sinensis
ENSODEG00000017664	-	99	77.119	ENSPMGG00000008755	syf2	92	77.119	Periophthalmus_magnuspinnatus
ENSODEG00000017664	-	98	91.102	ENSPEMG00000008283	Syf2	98	91.102	Peromyscus_maniculatus_bairdii
ENSODEG00000017664	-	95	92.444	ENSPCIG00000014235	SYF2	92	91.266	Phascolarctos_cinereus
ENSODEG00000017664	-	100	73.967	ENSPFOG00000004116	syf2	100	73.967	Poecilia_formosa
ENSODEG00000017664	-	93	78.378	ENSPLAG00000006691	syf2	95	78.378	Poecilia_latipinna
ENSODEG00000017664	-	99	72.385	ENSPMEG00000011684	syf2	100	70.833	Poecilia_mexicana
ENSODEG00000017664	-	91	80.093	ENSPREG00000003009	syf2	94	78.475	Poecilia_reticulata
ENSODEG00000017664	-	98	95.279	ENSPPYG00000001713	SYF2	96	95.279	Pongo_abelii
ENSODEG00000017664	-	98	63.090	ENSPCOG00000027011	SYF2	94	62.661	Propithecus_coquereli
ENSODEG00000017664	-	96	82.533	ENSPVAG00000005841	SYF2	93	82.533	Pteropus_vampyrus
ENSODEG00000017664	-	93	79.730	ENSPNYG00000004979	syf2	99	76.596	Pundamilia_nyererei
ENSODEG00000017664	-	95	82.301	ENSPNAG00000015570	syf2	95	82.301	Pygocentrus_nattereri
ENSODEG00000017664	-	98	91.102	ENSRNOG00000060597	Syf2	98	91.102	Rattus_norvegicus
ENSODEG00000017664	-	98	92.275	ENSRBIG00000042970	SYF2	96	92.275	Rhinopithecus_bieti
ENSODEG00000017664	-	98	94.850	ENSRROG00000001347	SYF2	96	94.850	Rhinopithecus_roxellana
ENSODEG00000017664	-	98	93.991	ENSSBOG00000020184	SYF2	96	93.991	Saimiri_boliviensis_boliviensis
ENSODEG00000017664	-	95	91.556	ENSSHAG00000015630	-	90	91.556	Sarcophilus_harrisii
ENSODEG00000017664	-	86	92.718	ENSSHAG00000007152	-	100	92.718	Sarcophilus_harrisii
ENSODEG00000017664	-	99	78.390	ENSSFOG00015023647	syf2	99	78.390	Scleropages_formosus
ENSODEG00000017664	-	93	79.730	ENSSMAG00000009867	syf2	93	79.730	Scophthalmus_maximus
ENSODEG00000017664	-	92	82.110	ENSSDUG00000013072	syf2	100	76.132	Seriola_dumerili
ENSODEG00000017664	-	92	82.110	ENSSLDG00000012677	syf2	92	82.110	Seriola_lalandi_dorsalis
ENSODEG00000017664	-	98	73.932	ENSSARG00000012889	SYF2	96	73.932	Sorex_araneus
ENSODEG00000017664	-	96	85.590	ENSSPUG00000005251	SYF2	91	85.590	Sphenodon_punctatus
ENSODEG00000017664	-	97	78.205	ENSSPAG00000009626	syf2	98	78.205	Stegastes_partitus
ENSODEG00000017664	-	94	97.309	ENSSSCG00000037481	SYF2	91	97.309	Sus_scrofa
ENSODEG00000017664	-	63	60.927	ENSTGUG00000001126	SYF2	87	59.322	Taeniopygia_guttata
ENSODEG00000017664	-	100	75.210	ENSTRUG00000001499	syf2	94	75.210	Takifugu_rubripes
ENSODEG00000017664	-	94	78.475	ENSTNIG00000016912	syf2	100	78.475	Tetraodon_nigroviridis
ENSODEG00000017664	-	98	70.815	ENSTBEG00000017370	SYF2	95	70.386	Tupaia_belangeri
ENSODEG00000017664	-	99	91.358	ENSTTRG00000003550	SYF2	99	91.358	Tursiops_truncatus
ENSODEG00000017664	-	98	91.489	ENSUAMG00000002897	SYF2	96	91.489	Ursus_americanus
ENSODEG00000017664	-	99	88.980	ENSUMAG00000013108	SYF2	96	91.915	Ursus_maritimus
ENSODEG00000017664	-	99	90.456	ENSVPAG00000005705	SYF2	96	93.590	Vicugna_pacos
ENSODEG00000017664	-	99	89.388	ENSVVUG00000027175	-	96	92.766	Vulpes_vulpes
ENSODEG00000017664	-	86	96.098	ENSVVUG00000027181	-	95	90.638	Vulpes_vulpes
ENSODEG00000017664	-	99	81.356	ENSXETG00000022797	syf2	95	81.356	Xenopus_tropicalis
ENSODEG00000017664	-	90	80.000	ENSXMAG00000022698	syf2	93	77.928	Xiphophorus_maculatus