EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000017674 (Gene tree)
Gene ID
101583546
Gene Symbol
-
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
27723 bases
Position
chrJH651613.1:5085921-5113643
Accession
101583546
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000024150RNA_pol_Rpb1_5PF04998.176.4e-10111
ENSODEP00000024149RNA_pol_Rpb1_5PF04998.176.5e-10111
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38138
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38238
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38338
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38438
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38538
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38638
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38738
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38838
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-38938
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381038
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381138
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381238
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381338
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381438
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381538
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381638
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381738
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381838
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-381938
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382038
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382138
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382238
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382338
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382438
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382538
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382638
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382738
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382838
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-382938
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383038
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383138
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383238
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383338
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383438
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383538
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383638
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383738
ENSODEP00000024150RNA_pol_Rpb1_RPF05001.131.4e-383838
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31136
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31236
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31336
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31436
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31536
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31636
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31736
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31836
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-31936
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311036
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311136
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311236
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311336
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311436
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311536
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311636
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311736
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311836
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-311936
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312036
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312136
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312236
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312336
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312436
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312536
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312636
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312736
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312836
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-312936
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-313036
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-313136
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-313236
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-313336
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-313436
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-313536
ENSODEP00000024149RNA_pol_Rpb1_RPF05001.131.1e-313636
ENSODEP00000024150RNA_pol_Rpb1_4PF05000.173.6e-3811
ENSODEP00000024149RNA_pol_Rpb1_4PF05000.173.6e-3811
ENSODEP00000024150RNA_pol_Rpb1_2PF00623.201.2e-7411
ENSODEP00000024149RNA_pol_Rpb1_2PF00623.201.2e-7411
ENSODEP00000024150RNA_pol_Rpb1_3PF04983.188.7e-5011
ENSODEP00000024149RNA_pol_Rpb1_3PF04983.188.8e-5011
ENSODEP00000024150RNA_pol_Rpb1_1PF04997.125.6e-10911
ENSODEP00000024149RNA_pol_Rpb1_1PF04997.125.7e-10911
ENSODEP00000024150RNA_pol_Rpb1_7PF04990.122.2e-5411
ENSODEP00000024149RNA_pol_Rpb1_7PF04990.122.2e-5411
ENSODEP00000024150RNA_pol_Rpb1_6PF04992.148.5e-6911
ENSODEP00000024149RNA_pol_Rpb1_6PF04992.148.7e-6911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000024424-5691XM_004638407ENSODEP000000241501896 (aa)XP_004638464-
ENSODET00000024423-5730-ENSODEP000000241491909 (aa)--
Gene Model
Click here to download ENSODEG00000017674's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017674's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000017674-6938.521ENSODEG00000015146POLR3A9138.326
ENSODEG00000017674-5238.060ENSODEG00000003542POLR1A7638.060
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000017674-9190.080ENSAPOG00000006552polr2a9094.522Acanthochromis_polyacanthus
ENSODEG00000017674-8391.661ENSACIG00000015982polr2a8191.227Amphilophus_citrinellus
ENSODEG00000017674-9388.936ENSAOCG00000004255polr2a8994.456Amphiprion_ocellaris
ENSODEG00000017674-8590.074ENSAPEG00000012623polr2a8794.456Amphiprion_percula
ENSODEG00000017674-8589.951ENSATEG00000019644polr2a8794.322Anabas_testudineus
ENSODEG00000017674-10093.807ENSACAG00000014561POLR2A10090.881Anolis_carolinensis
ENSODEG00000017674-10096.843ENSANAG00000020093-10097.050Aotus_nancymaae
ENSODEG00000017674-8589.827ENSACLG00000006735polr2a8794.188Astatotilapia_calliptera
ENSODEG00000017674-8589.982ENSAMXG00000020046polr2a8794.589Astyanax_mexicanus
ENSODEG00000017674-10095.081ENSBTAG00000046765POLR2A10092.245Bos_taurus
ENSODEG00000017674-10094.721ENSCAFG00000016532POLR2A9899.733Canis_familiaris
ENSODEG00000017674-10096.118ENSCAFG00020007929-10096.325Canis_lupus_dingo
ENSODEG00000017674-10095.081ENSCHIG00000027173-10092.245Capra_hircus
ENSODEG00000017674-10096.843ENSTSYG00000012803-10097.050Carlito_syrichta
ENSODEG00000017674-9893.241ENSCAPG00000001882-9497.961Cavia_aperea
ENSODEG00000017674-10094.101ENSCPOG00000014812-9799.933Cavia_porcellus
ENSODEG00000017674-10096.843ENSCCAG00000020938-10097.050Cebus_capucinus
ENSODEG00000017674-10096.118ENSCATG00000013680-10096.325Cercocebus_atys
ENSODEG00000017674-10097.759ENSCLAG00000012196-10097.759Chinchilla_lanigera
ENSODEG00000017674-10089.340ENSCPBG00000012697POLR2A10089.340Chrysemys_picta_bellii
ENSODEG00000017674-9974.149ENSCING00000007884-9977.462Ciona_intestinalis
ENSODEG00000017674-9973.862ENSCSAVG00000008334-9980.180Ciona_savignyi
ENSODEG00000017674-10095.380ENSCANG00000010622-10095.585Colobus_angolensis_palliatus
ENSODEG00000017674-10095.561ENSCGRG00001003538Polr2a10095.561Cricetulus_griseus_chok1gshd
ENSODEG00000017674-9594.521ENSCGRG00000012105Polr2a9299.667Cricetulus_griseus_crigri
ENSODEG00000017674-8589.396ENSCSEG00000002635polr2a8793.721Cynoglossus_semilaevis
ENSODEG00000017674-8590.136ENSCVAG00000005156polr2a8794.522Cyprinodon_variegatus
ENSODEG00000017674-8590.018ENSDARG00000099966polr2a8794.456Danio_rerio
ENSODEG00000017674-10092.234ENSDNOG00000016482-10092.132Dasypus_novemcinctus
ENSODEG00000017674-10096.843ENSDORG00000008667Polr2a10097.050Dipodomys_ordii
ENSODEG00000017674-9969.658FBgn0003277RpII2159676.074Drosophila_melanogaster
ENSODEG00000017674-9488.853ENSETEG00000002540-8595.817Echinops_telfairi
ENSODEG00000017674-8484.860ENSEBUG00000013967polr2a8387.849Eptatretus_burgeri
ENSODEG00000017674-8394.727ENSEASG00005019114-8294.151Equus_asinus_asinus
ENSODEG00000017674-10095.178ENSECAG00000018485POLR2A10092.499Equus_caballus
ENSODEG00000017674-9199.599ENSEEUG00000001154-9599.599Erinaceus_europaeus
ENSODEG00000017674-9089.774ENSELUG00000014284polr2a8489.457Esox_lucius
ENSODEG00000017674-10096.249ENSFDAG00000008287-10096.249Fukomys_damarensis
ENSODEG00000017674-9889.975ENSFHEG00000001768polr2a8794.522Fundulus_heteroclitus
ENSODEG00000017674-9886.675ENSGMOG00000007725polr2a9992.910Gadus_morhua
ENSODEG00000017674-10094.366ENSGAFG00000005389polr2a9994.456Gambusia_affinis
ENSODEG00000017674-10096.623ENSGGOG00000014800-10096.623Gorilla_gorilla
ENSODEG00000017674-9789.613ENSHBUG00000018937polr2a9790.909Haplochromis_burtoni
ENSODEG00000017674-10096.791ENSHGLG00000012381POLR2A10096.998Heterocephalus_glaber_female
ENSODEG00000017674-10096.791ENSHGLG00100014843POLR2A10096.998Heterocephalus_glaber_male
ENSODEG00000017674-8589.060ENSHCOG00000011874polr2a8793.788Hippocampus_comes
ENSODEG00000017674-8589.367ENSIPUG00000002613Polr2a8793.921Ictalurus_punctatus
ENSODEG00000017674-10096.843ENSSTOG00000001304-10097.050Ictidomys_tridecemlineatus
ENSODEG00000017674-10096.739ENSJJAG00000013049Polr2a10096.946Jaculus_jaculus
ENSODEG00000017674-8481.320ENSKMAG00000016343polr2a8389.286Kryptolebias_marmoratus
ENSODEG00000017674-8589.704ENSLBEG00000027652polr2a8794.055Labrus_bergylta
ENSODEG00000017674-8987.389ENSLOCG00000013863polr2a8894.593Lepisosteus_oculatus
ENSODEG00000017674-10095.178ENSLAFG00000008626-10092.499Loxodonta_africana
ENSODEG00000017674-5298.161ENSMFAG00000007042-9998.161Macaca_fascicularis
ENSODEG00000017674-10096.791ENSMMUG00000023620-10096.998Macaca_mulatta
ENSODEG00000017674-10096.235ENSMNEG00000040407-10096.235Macaca_nemestrina
ENSODEG00000017674-8390.591ENSMLEG00000030263-9998.161Mandrillus_leucophaeus
ENSODEG00000017674-8589.827ENSMAMG00000003351polr2a8794.188Mastacembelus_armatus
ENSODEG00000017674-8589.827ENSMZEG00005021429polr2a8794.188Maylandia_zebra
ENSODEG00000017674-5299.694ENSMAUG00000021055-9999.694Mesocricetus_auratus
ENSODEG00000017674-10096.017ENSMICG00000013372-9898.567Microcebus_murinus
ENSODEG00000017674-10094.437ENSMOCG00000018279Polr2a9997.207Microtus_ochrogaster
ENSODEG00000017674-9089.183ENSMMOG00000012515polr2a8993.721Mola_mola
ENSODEG00000017674-10094.822ENSMODG00000007009-10091.891Monodelphis_domestica
ENSODEG00000017674-9490.074ENSMALG00000008716polr2a9593.063Monopterus_albus
ENSODEG00000017674-10096.791MGP_CAROLIEiJ_G0016587Polr2a10096.998Mus_caroli
ENSODEG00000017674-10096.791ENSMUSG00000005198Polr2a10096.998Mus_musculus
ENSODEG00000017674-10093.330MGP_PahariEiJ_G0017718Polr2a10090.505Mus_pahari
ENSODEG00000017674-10096.791MGP_SPRETEiJ_G0017423Polr2a10096.998Mus_spretus
ENSODEG00000017674-10095.076ENSMPUG00000009648-10092.195Mustela_putorius_furo
ENSODEG00000017674-10094.675ENSMLUG00000009088-10091.797Myotis_lucifugus
ENSODEG00000017674-10096.843ENSNGAG00000002543Polr2a10097.050Nannospalax_galili
ENSODEG00000017674-8391.409ENSNBRG00000002005polr2a8190.973Neolamprologus_brichardi
ENSODEG00000017674-10096.843ENSNLEG00000009460-10097.050Nomascus_leucogenys
ENSODEG00000017674-9399.346ENSMEUG00000008611-9299.346Notamacropus_eugenii
ENSODEG00000017674-8396.244ENSOPRG00000015116-9698.486Ochotona_princeps
ENSODEG00000017674-8590.012ENSONIG00000009231polr2a8794.389Oreochromis_niloticus
ENSODEG00000017674-10091.175ENSOCUG00000017929-9699.666Oryctolagus_cuniculus
ENSODEG00000017674-8589.870ENSORLG00000006431polr2a8794.122Oryzias_latipes
ENSODEG00000017674-8589.870ENSORLG00020010235polr2a8794.122Oryzias_latipes_hni
ENSODEG00000017674-8589.870ENSORLG00015007075polr2a8794.122Oryzias_latipes_hsok
ENSODEG00000017674-9889.345ENSOMEG00000010713polr2a9893.097Oryzias_melastigma
ENSODEG00000017674-10095.025ENSOGAG00000033608-10092.144Otolemur_garnettii
ENSODEG00000017674-9794.709ENSOARG00000013874-8999.800Ovis_aries
ENSODEG00000017674-10096.993ENSPPAG00000043734-10097.299Pan_paniscus
ENSODEG00000017674-10096.843ENSPTRG00000008691POLR2A10097.050Pan_troglodytes
ENSODEG00000017674-10096.118ENSPANG00000024099-10096.325Papio_anubis
ENSODEG00000017674-8392.435ENSPKIG00000005727polr2a8592.435Paramormyrops_kingsleyae
ENSODEG00000017674-9891.386ENSPSIG00000014006POLR2A9994.889Pelodiscus_sinensis
ENSODEG00000017674-10090.798ENSPMGG00000019734polr2a9993.194Periophthalmus_magnuspinnatus
ENSODEG00000017674-10096.843ENSPEMG00000012521Polr2a10097.050Peromyscus_maniculatus_bairdii
ENSODEG00000017674-8494.493ENSPCIG00000028851-7699.265Phascolarctos_cinereus
ENSODEG00000017674-10089.914ENSPFOG00000007890polr2a7894.456Poecilia_formosa
ENSODEG00000017674-10089.914ENSPLAG00000007399polr2a7894.456Poecilia_latipinna
ENSODEG00000017674-10089.914ENSPMEG00000002071polr2a7894.456Poecilia_mexicana
ENSODEG00000017674-8590.012ENSPREG00000013122polr2a8794.389Poecilia_reticulata
ENSODEG00000017674-10094.944ENSPPYG00000007924-10092.300Pongo_abelii
ENSODEG00000017674-9299.868ENSPCAG00000006951-9299.868Procavia_capensis
ENSODEG00000017674-10096.791ENSPCOG00000025260-10096.998Propithecus_coquereli
ENSODEG00000017674-10094.924ENSPVAG00000005069-10092.043Pteropus_vampyrus
ENSODEG00000017674-9290.885ENSPNYG00000022340polr2a9990.921Pundamilia_nyererei
ENSODEG00000017674-8590.043ENSPNAG00000011237polr2a8993.180Pygocentrus_nattereri
ENSODEG00000017674-10095.076ENSRNOG00000028834Polr2a10092.195Rattus_norvegicus
ENSODEG00000017674-10097.222ENSRBIG00000002471-10097.222Rhinopithecus_bieti
ENSODEG00000017674-10095.318ENSRROG00000029583-10092.319Rhinopithecus_roxellana
ENSODEG00000017674-8688.000YDL140CRPO219580.180Saccharomyces_cerevisiae
ENSODEG00000017674-10096.843ENSSBOG00000000808-10097.050Saimiri_boliviensis_boliviensis
ENSODEG00000017674-10095.179ENSSHAG00000002858-10095.179Sarcophilus_harrisii
ENSODEG00000017674-8589.859ENSSFOG00015023275polr2a8992.984Scleropages_formosus
ENSODEG00000017674-8589.951ENSSDUG00000020466polr2a8794.322Seriola_dumerili
ENSODEG00000017674-8589.951ENSSLDG00000020613polr2a8794.322Seriola_lalandi_dorsalis
ENSODEG00000017674-9890.113ENSSARG00000005875-9990.267Sorex_araneus
ENSODEG00000017674-10089.835ENSSPAG00000016741polr2a9294.389Stegastes_partitus
ENSODEG00000017674-10094.416ENSSSCG00000028278-10091.536Sus_scrofa
ENSODEG00000017674-9984.110ENSTRUG00000012320polr2a8187.558Takifugu_rubripes
ENSODEG00000017674-9985.085ENSTNIG00000010136polr2a9992.652Tetraodon_nigroviridis
ENSODEG00000017674-77100.000ENSTBEG00000013294-58100.000Tupaia_belangeri
ENSODEG00000017674-10093.604ENSTTRG00000014273-10090.725Tursiops_truncatus
ENSODEG00000017674-9596.038ENSUAMG00000014866-10099.334Ursus_americanus
ENSODEG00000017674-9995.000ENSUMAG00000015732-10095.000Ursus_maritimus
ENSODEG00000017674-63100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSODEG00000017674-10092.437ENSVVUG00000027878-10095.637Vulpes_vulpes
ENSODEG00000017674-9292.105ENSXCOG00000001804polr2a9493.063Xiphophorus_couchianus
ENSODEG00000017674-8590.012ENSXMAG00000015687polr2a8794.389Xiphophorus_maculatus

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