EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000017696 (Gene tree)
Gene ID: 101573544
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4B
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 14285 bases
Position: chrJH651533.1:21672837-21687121
Accession: 101573544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024176	zf-CCHC	PF00098.23	1.7e-07	1	1
ENSODEP00000024176	RRM_5	PF13893.6	2e-08	1	2
ENSODEP00000024176	RRM_5	PF13893.6	2e-08	2	2
ENSODEP00000024176	RRM_1	PF00076.22	1.9e-34	1	2
ENSODEP00000024176	RRM_1	PF00076.22	1.9e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024450	-	1821	XM_004627176	ENSODEP00000024176	359 (aa)	XP_004627233	UPI000333DD7D

Gene Model

Click here to download ENSODEG00000017696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000017696	-	100	87.397	ENSODEG00000017717	RBM14	97	100.000
ENSODEG00000017696	-	100	74.095	ENSODEG00000001866	-	100	73.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017696	-	96	99.390	ENSG00000173933	RBM4	97	99.275	Homo_sapiens
ENSODEG00000017696	-	99	63.388	ENSG00000248643	RBM14-RBM4	100	63.288	Homo_sapiens
ENSODEG00000017696	-	100	97.772	ENSG00000173914	RBM4B	100	97.772	Homo_sapiens
ENSODEG00000017696	-	100	87.671	ENSAMEG00000010914	RBM4	100	87.945	Ailuropoda_melanoleuca
ENSODEG00000017696	-	100	98.329	ENSAMEG00000010906	RBM4B	100	98.329	Ailuropoda_melanoleuca
ENSODEG00000017696	-	100	97.493	ENSANAG00000023478	RBM4B	100	97.493	Aotus_nancymaae
ENSODEG00000017696	-	100	97.493	ENSBTAG00000000423	RBM4B	100	97.493	Bos_taurus
ENSODEG00000017696	-	100	88.398	ENSBTAG00000031688	RBM4	100	88.950	Bos_taurus
ENSODEG00000017696	-	100	97.493	ENSCJAG00000013666	RBM4B	100	97.493	Callithrix_jacchus
ENSODEG00000017696	-	100	98.050	ENSCAFG00000012378	RBM4B	100	98.050	Canis_familiaris
ENSODEG00000017696	-	100	87.671	ENSCAFG00000012388	RBM4	100	87.945	Canis_familiaris
ENSODEG00000017696	-	100	87.671	ENSCAFG00020015515	RBM4	100	87.945	Canis_lupus_dingo
ENSODEG00000017696	-	100	98.050	ENSCAFG00020015519	RBM4B	100	98.050	Canis_lupus_dingo
ENSODEG00000017696	-	100	88.398	ENSCHIG00000020613	RBM4	100	88.950	Capra_hircus
ENSODEG00000017696	-	100	97.772	ENSCHIG00000008907	RBM4B	100	97.772	Capra_hircus
ENSODEG00000017696	-	65	94.468	ENSTSYG00000009580	RBM4B	96	94.468	Carlito_syrichta
ENSODEG00000017696	-	100	99.164	ENSCAPG00000009570	RBM4B	100	99.164	Cavia_aperea
ENSODEG00000017696	-	100	87.397	ENSCAPG00000016600	RBM4	97	100.000	Cavia_aperea
ENSODEG00000017696	-	100	99.164	ENSCPOG00000013689	RBM4B	100	99.164	Cavia_porcellus
ENSODEG00000017696	-	100	87.397	ENSCPOG00000013194	RBM4	97	100.000	Cavia_porcellus
ENSODEG00000017696	-	56	72.139	ENSCCAG00000023319	-	100	72.139	Cebus_capucinus
ENSODEG00000017696	-	100	97.772	ENSCCAG00000016501	RBM4B	100	97.772	Cebus_capucinus
ENSODEG00000017696	-	100	97.772	ENSCATG00000035353	RBM4B	100	97.772	Cercocebus_atys
ENSODEG00000017696	-	100	99.164	ENSCLAG00000015287	RBM4B	100	99.164	Chinchilla_lanigera
ENSODEG00000017696	-	100	87.123	ENSCLAG00000014756	RBM4	97	100.000	Chinchilla_lanigera
ENSODEG00000017696	-	100	97.772	ENSCSAG00000008361	RBM4B	100	97.772	Chlorocebus_sabaeus
ENSODEG00000017696	-	100	98.050	ENSCHOG00000002892	RBM4B	100	98.050	Choloepus_hoffmanni
ENSODEG00000017696	-	62	80.176	ENSCHOG00000009753	RBM14-RBM4	100	80.617	Choloepus_hoffmanni
ENSODEG00000017696	-	100	75.328	ENSCPBG00000023800	-	100	75.263	Chrysemys_picta_bellii
ENSODEG00000017696	-	100	97.772	ENSCANG00000021868	RBM4B	100	97.772	Colobus_angolensis_palliatus
ENSODEG00000017696	-	100	92.479	ENSCGRG00001024693	Rbm4b	100	93.036	Cricetulus_griseus_chok1gshd
ENSODEG00000017696	-	100	87.778	ENSCGRG00001016609	-	97	99.275	Cricetulus_griseus_chok1gshd
ENSODEG00000017696	-	100	87.778	ENSCGRG00000010183	-	97	99.275	Cricetulus_griseus_crigri
ENSODEG00000017696	-	100	92.479	ENSCGRG00000012112	Rbm4b	100	93.036	Cricetulus_griseus_crigri
ENSODEG00000017696	-	100	87.123	ENSDNOG00000032390	RBM4	100	87.397	Dasypus_novemcinctus
ENSODEG00000017696	-	100	97.493	ENSDNOG00000019500	-	100	97.493	Dasypus_novemcinctus
ENSODEG00000017696	-	100	96.379	ENSDNOG00000045639	-	100	96.379	Dasypus_novemcinctus
ENSODEG00000017696	-	100	95.822	ENSDORG00000029108	Rbm4b	100	95.822	Dipodomys_ordii
ENSODEG00000017696	-	100	87.328	ENSDORG00000004538	-	97	98.551	Dipodomys_ordii
ENSODEG00000017696	-	62	71.946	ENSETEG00000018142	-	100	71.946	Echinops_telfairi
ENSODEG00000017696	-	100	88.643	ENSEASG00005005064	RBM4	100	88.920	Equus_asinus_asinus
ENSODEG00000017696	-	100	98.329	ENSEASG00005005068	RBM4B	100	98.329	Equus_asinus_asinus
ENSODEG00000017696	-	100	88.643	ENSECAG00000022940	RBM4	100	88.920	Equus_caballus
ENSODEG00000017696	-	100	98.050	ENSECAG00000022987	RBM4B	100	98.050	Equus_caballus
ENSODEG00000017696	-	100	91.758	ENSEEUG00000000058	RBM4B	100	92.033	Erinaceus_europaeus
ENSODEG00000017696	-	100	87.671	ENSFCAG00000029651	RBM4	97	99.275	Felis_catus
ENSODEG00000017696	-	100	98.607	ENSFCAG00000007394	RBM4B	100	98.607	Felis_catus
ENSODEG00000017696	-	100	70.270	ENSFALG00000002073	-	100	69.377	Ficedula_albicollis
ENSODEG00000017696	-	100	87.123	ENSFDAG00000005447	RBM4	97	100.000	Fukomys_damarensis
ENSODEG00000017696	-	100	99.164	ENSFDAG00000015530	RBM4B	100	99.164	Fukomys_damarensis
ENSODEG00000017696	-	100	77.867	ENSGALG00000037946	-	100	77.540	Gallus_gallus
ENSODEG00000017696	-	100	75.066	ENSGAGG00000008553	-	100	75.000	Gopherus_agassizii
ENSODEG00000017696	-	100	97.772	ENSGGOG00000011698	RBM4B	100	97.772	Gorilla_gorilla
ENSODEG00000017696	-	100	83.565	ENSHGLG00000002853	-	100	83.565	Heterocephalus_glaber_female
ENSODEG00000017696	-	100	87.123	ENSHGLG00000009991	RBM4	97	100.000	Heterocephalus_glaber_female
ENSODEG00000017696	-	100	99.443	ENSHGLG00000016412	-	100	99.443	Heterocephalus_glaber_female
ENSODEG00000017696	-	79	65.152	ENSHGLG00000000117	-	95	74.095	Heterocephalus_glaber_female
ENSODEG00000017696	-	100	79.224	ENSHGLG00100003854	RBM4	97	100.000	Heterocephalus_glaber_male
ENSODEG00000017696	-	100	98.611	ENSHGLG00100003978	-	100	98.611	Heterocephalus_glaber_male
ENSODEG00000017696	-	96	84.840	ENSHGLG00100020033	-	100	84.840	Heterocephalus_glaber_male
ENSODEG00000017696	-	100	98.329	ENSSTOG00000011226	RBM4B	100	98.329	Ictidomys_tridecemlineatus
ENSODEG00000017696	-	100	87.397	ENSSTOG00000022811	RBM4	97	99.275	Ictidomys_tridecemlineatus
ENSODEG00000017696	-	100	94.708	ENSJJAG00000020870	Rbm4b	100	94.708	Jaculus_jaculus
ENSODEG00000017696	-	100	93.872	ENSLAFG00000002285	RBM4B	100	93.872	Loxodonta_africana
ENSODEG00000017696	-	100	86.301	ENSLAFG00000028147	-	100	87.123	Loxodonta_africana
ENSODEG00000017696	-	100	97.772	ENSMFAG00000033927	RBM4B	100	97.772	Macaca_fascicularis
ENSODEG00000017696	-	100	97.772	ENSMNEG00000043371	RBM4B	100	97.772	Macaca_nemestrina
ENSODEG00000017696	-	100	97.772	ENSMLEG00000028563	RBM4B	100	97.772	Mandrillus_leucophaeus
ENSODEG00000017696	-	100	92.758	ENSMAUG00000017027	Rbm4b	100	93.036	Mesocricetus_auratus
ENSODEG00000017696	-	100	97.214	ENSMICG00000003820	RBM4B	100	97.214	Microcebus_murinus
ENSODEG00000017696	-	100	92.758	ENSMOCG00000001835	Rbm4b	100	93.315	Microtus_ochrogaster
ENSODEG00000017696	-	100	85.870	ENSMODG00000008056	-	100	86.413	Monodelphis_domestica
ENSODEG00000017696	-	100	88.366	MGP_CAROLIEiJ_G0022516	-	97	99.275	Mus_caroli
ENSODEG00000017696	-	99	63.260	MGP_CAROLIEiJ_G0022514	-	100	63.260	Mus_caroli
ENSODEG00000017696	-	100	96.657	MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	Mus_caroli
ENSODEG00000017696	-	100	87.812	ENSMUSG00000094936	Rbm4	100	99.419	Mus_musculus
ENSODEG00000017696	-	100	87.812	ENSMUSG00000096370	Gm21992	100	87.812	Mus_musculus
ENSODEG00000017696	-	100	96.379	ENSMUSG00000033760	Rbm4b	100	96.379	Mus_musculus
ENSODEG00000017696	-	100	87.569	MGP_PahariEiJ_G0014011	-	100	87.845	Mus_pahari
ENSODEG00000017696	-	100	96.100	MGP_PahariEiJ_G0014012	Rbm4b	100	96.100	Mus_pahari
ENSODEG00000017696	-	100	87.569	MGP_PahariEiJ_G0014013	-	97	99.275	Mus_pahari
ENSODEG00000017696	-	100	84.752	MGP_SPRETEiJ_G0023429	-	100	85.461	Mus_spretus
ENSODEG00000017696	-	100	69.969	MGP_SPRETEiJ_G0023428	-	94	69.969	Mus_spretus
ENSODEG00000017696	-	100	69.969	MGP_SPRETEiJ_G0023430	-	100	69.969	Mus_spretus
ENSODEG00000017696	-	100	87.397	ENSMPUG00000003443	RBM4	100	87.671	Mustela_putorius_furo
ENSODEG00000017696	-	100	98.050	ENSMPUG00000003450	RBM4B	100	98.050	Mustela_putorius_furo
ENSODEG00000017696	-	99	85.912	ENSMLUG00000004076	RBM4	95	86.740	Myotis_lucifugus
ENSODEG00000017696	-	100	94.986	ENSMLUG00000001290	RBM4B	100	94.986	Myotis_lucifugus
ENSODEG00000017696	-	100	95.822	ENSNGAG00000016292	Rbm4b	100	95.822	Nannospalax_galili
ENSODEG00000017696	-	100	96.936	ENSNLEG00000006213	RBM4B	100	96.936	Nomascus_leucogenys
ENSODEG00000017696	-	100	88.219	ENSNLEG00000035021	RBM4	97	99.275	Nomascus_leucogenys
ENSODEG00000017696	-	62	81.498	ENSMEUG00000005739	-	100	81.938	Notamacropus_eugenii
ENSODEG00000017696	-	100	88.154	ENSMEUG00000001445	-	100	88.430	Notamacropus_eugenii
ENSODEG00000017696	-	100	96.100	ENSOPRG00000009158	RBM4B	100	96.100	Ochotona_princeps
ENSODEG00000017696	-	100	87.945	ENSOPRG00000009149	RBM4	100	87.945	Ochotona_princeps
ENSODEG00000017696	-	100	80.223	ENSOANG00000003143	-	84	79.167	Ornithorhynchus_anatinus
ENSODEG00000017696	-	100	86.667	ENSOANG00000011036	-	100	86.111	Ornithorhynchus_anatinus
ENSODEG00000017696	-	100	98.329	ENSOCUG00000006695	LARK	100	98.329	Oryctolagus_cuniculus
ENSODEG00000017696	-	100	87.397	ENSOCUG00000004731	RBM4	100	87.671	Oryctolagus_cuniculus
ENSODEG00000017696	-	100	98.050	ENSOGAG00000015648	RBM4B	100	98.050	Otolemur_garnettii
ENSODEG00000017696	-	100	87.978	ENSOGAG00000015647	RBM4	100	87.123	Otolemur_garnettii
ENSODEG00000017696	-	100	87.293	ENSOARG00000007700	RBM4	100	87.845	Ovis_aries
ENSODEG00000017696	-	100	95.868	ENSOARG00000007759	RBM4B	100	95.868	Ovis_aries
ENSODEG00000017696	-	100	97.772	ENSPPAG00000015125	RBM4B	100	97.772	Pan_paniscus
ENSODEG00000017696	-	100	87.671	ENSPPRG00000003533	RBM4	97	99.275	Panthera_pardus
ENSODEG00000017696	-	100	98.329	ENSPPRG00000003388	RBM4B	100	98.329	Panthera_pardus
ENSODEG00000017696	-	100	80.495	ENSPTIG00000016180	RBM4	97	100.000	Panthera_tigris_altaica
ENSODEG00000017696	-	100	98.329	ENSPTIG00000015426	RBM4B	100	98.329	Panthera_tigris_altaica
ENSODEG00000017696	-	100	97.772	ENSPTRG00000003935	RBM4B	100	97.772	Pan_troglodytes
ENSODEG00000017696	-	100	97.772	ENSPANG00000020672	RBM4B	100	97.772	Papio_anubis
ENSODEG00000017696	-	100	77.419	ENSPSIG00000003430	-	100	77.089	Pelodiscus_sinensis
ENSODEG00000017696	-	77	80.277	ENSPSIG00000003477	-	95	79.452	Pelodiscus_sinensis
ENSODEG00000017696	-	100	96.379	ENSPEMG00000009144	Rbm4b	100	96.379	Peromyscus_maniculatus_bairdii
ENSODEG00000017696	-	100	87.123	ENSPPYG00000003012	RBM4	100	87.088	Pongo_abelii
ENSODEG00000017696	-	100	97.772	ENSPPYG00000003010	RBM4B	100	97.772	Pongo_abelii
ENSODEG00000017696	-	100	87.671	ENSPCAG00000003393	-	100	88.493	Procavia_capensis
ENSODEG00000017696	-	100	98.050	ENSPCOG00000027885	RBM4B	100	98.050	Propithecus_coquereli
ENSODEG00000017696	-	100	98.050	ENSPVAG00000010487	RBM4B	100	98.050	Pteropus_vampyrus
ENSODEG00000017696	-	100	87.397	ENSPVAG00000010486	RBM4	100	87.671	Pteropus_vampyrus
ENSODEG00000017696	-	100	86.849	ENSRNOG00000050741	Rbm4	97	99.275	Rattus_norvegicus
ENSODEG00000017696	-	100	96.936	ENSRNOG00000061795	Rbm4b	100	96.936	Rattus_norvegicus
ENSODEG00000017696	-	100	97.772	ENSRBIG00000019394	RBM4B	100	97.772	Rhinopithecus_bieti
ENSODEG00000017696	-	100	97.772	ENSRROG00000032850	RBM4B	100	97.772	Rhinopithecus_roxellana
ENSODEG00000017696	-	100	97.214	ENSSBOG00000034474	RBM4B	100	97.214	Saimiri_boliviensis_boliviensis
ENSODEG00000017696	-	100	88.056	ENSSHAG00000008386	-	100	87.778	Sarcophilus_harrisii
ENSODEG00000017696	-	100	96.936	ENSSARG00000010710	RBM4B	100	96.936	Sorex_araneus
ENSODEG00000017696	-	100	87.671	ENSSSCG00000032437	RBM4	100	87.945	Sus_scrofa
ENSODEG00000017696	-	78	79.863	ENSTGUG00000016779	-	94	79.110	Taeniopygia_guttata
ENSODEG00000017696	-	100	96.100	ENSTBEG00000003748	RBM4B	100	96.100	Tupaia_belangeri
ENSODEG00000017696	-	64	94.091	ENSTBEG00000003727	-	68	94.836	Tupaia_belangeri
ENSODEG00000017696	-	100	98.329	ENSTTRG00000011166	RBM4B	100	98.329	Tursiops_truncatus
ENSODEG00000017696	-	100	87.123	ENSTTRG00000011164	RBM4	100	87.397	Tursiops_truncatus
ENSODEG00000017696	-	100	87.671	ENSUAMG00000014882	RBM4	97	99.275	Ursus_americanus
ENSODEG00000017696	-	100	98.050	ENSUAMG00000004745	RBM4B	100	98.050	Ursus_americanus
ENSODEG00000017696	-	65	94.468	ENSUMAG00000011738	-	97	98.551	Ursus_maritimus
ENSODEG00000017696	-	100	98.050	ENSVPAG00000001950	RBM4B	100	98.050	Vicugna_pacos
ENSODEG00000017696	-	100	87.397	ENSVPAG00000001949	RBM4	100	87.671	Vicugna_pacos
ENSODEG00000017696	-	100	87.123	ENSVVUG00000010622	RBM4	100	87.397	Vulpes_vulpes
ENSODEG00000017696	-	100	98.050	ENSVVUG00000010619	RBM4B	100	98.050	Vulpes_vulpes