EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000017764 (Gene tree)
Gene ID: 101569295
Gene Symbol: SF3B2
Alias: -
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 16534 bases
Position: chrJH651533.1:22343651-22360184
Accession: 101569295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024278	DUF382	PF04037.13	1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024553	SF3B2-201	2547	XM_004627355	ENSODEP00000024278	848 (aa)	XP_004627412	-

Gene Model

Click here to download ENSODEG00000017764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017764	SF3B2	100	94.191	ENSG00000087365	SF3B2	100	95.000	Homo_sapiens
ENSODEG00000017764	SF3B2	96	67.700	ENSAPOG00000001974	sf3b2	94	66.243	Acanthochromis_polyacanthus
ENSODEG00000017764	SF3B2	100	92.111	ENSAMEG00000017206	SF3B2	100	92.111	Ailuropoda_melanoleuca
ENSODEG00000017764	SF3B2	84	68.898	ENSACIG00000000624	sf3b2	97	64.149	Amphilophus_citrinellus
ENSODEG00000017764	SF3B2	97	66.100	ENSAOCG00000009207	sf3b2	100	64.732	Amphiprion_ocellaris
ENSODEG00000017764	SF3B2	97	65.730	ENSAPEG00000002762	sf3b2	100	62.309	Amphiprion_percula
ENSODEG00000017764	SF3B2	99	62.293	ENSACAG00000008615	SF3B2	99	62.930	Anolis_carolinensis
ENSODEG00000017764	SF3B2	100	94.312	ENSANAG00000029120	SF3B2	100	94.312	Aotus_nancymaae
ENSODEG00000017764	SF3B2	84	68.277	ENSACLG00000014771	sf3b2	100	63.676	Astatotilapia_calliptera
ENSODEG00000017764	SF3B2	97	62.925	ENSAMXG00000007929	sf3b2	99	61.672	Astyanax_mexicanus
ENSODEG00000017764	SF3B2	100	91.769	ENSBTAG00000002778	SF3B2	100	91.769	Bos_taurus
ENSODEG00000017764	SF3B2	57	52.485	WBGene00021004	sftb-2	79	53.799	Caenorhabditis_elegans
ENSODEG00000017764	SF3B2	100	94.425	ENSCJAG00000001656	SF3B2	100	94.425	Callithrix_jacchus
ENSODEG00000017764	SF3B2	100	92.205	ENSCAFG00000013033	SF3B2	100	92.205	Canis_familiaris
ENSODEG00000017764	SF3B2	100	92.205	ENSCAFG00020015382	SF3B2	100	92.205	Canis_lupus_dingo
ENSODEG00000017764	SF3B2	100	91.871	ENSCHIG00000011211	SF3B2	100	91.871	Capra_hircus
ENSODEG00000017764	SF3B2	100	94.191	ENSTSYG00000000959	SF3B2	100	94.191	Carlito_syrichta
ENSODEG00000017764	SF3B2	60	98.592	ENSCAPG00000006065	SF3B2	91	100.000	Cavia_aperea
ENSODEG00000017764	SF3B2	94	98.367	ENSCPOG00000008294	SF3B2	100	98.367	Cavia_porcellus
ENSODEG00000017764	SF3B2	100	94.425	ENSCCAG00000035256	SF3B2	100	94.425	Cebus_capucinus
ENSODEG00000017764	SF3B2	100	94.305	ENSCATG00000042240	SF3B2	100	94.305	Cercocebus_atys
ENSODEG00000017764	SF3B2	100	95.786	ENSCLAG00000016852	SF3B2	100	95.786	Chinchilla_lanigera
ENSODEG00000017764	SF3B2	100	92.514	ENSCSAG00000008121	SF3B2	100	92.514	Chlorocebus_sabaeus
ENSODEG00000017764	SF3B2	90	84.021	ENSCHOG00000001476	SF3B2	92	82.126	Choloepus_hoffmanni
ENSODEG00000017764	SF3B2	84	77.214	ENSCPBG00000022465	SF3B2	100	76.180	Chrysemys_picta_bellii
ENSODEG00000017764	SF3B2	73	56.923	ENSCING00000005665	-	99	57.256	Ciona_intestinalis
ENSODEG00000017764	SF3B2	71	57.233	ENSCSAVG00000002029	-	99	57.098	Ciona_savignyi
ENSODEG00000017764	SF3B2	100	94.305	ENSCANG00000039680	SF3B2	100	94.305	Colobus_angolensis_palliatus
ENSODEG00000017764	SF3B2	100	94.419	ENSCGRG00001015741	Sf3b2	100	94.419	Cricetulus_griseus_chok1gshd
ENSODEG00000017764	SF3B2	100	94.419	ENSCGRG00000018110	Sf3b2	100	94.419	Cricetulus_griseus_crigri
ENSODEG00000017764	SF3B2	75	70.509	ENSCSEG00000000230	sf3b2	78	73.975	Cynoglossus_semilaevis
ENSODEG00000017764	SF3B2	96	66.504	ENSCVAG00000003357	sf3b2	97	65.826	Cyprinodon_variegatus
ENSODEG00000017764	SF3B2	82	69.631	ENSDARG00000018049	sf3b2	99	62.896	Danio_rerio
ENSODEG00000017764	SF3B2	100	90.089	ENSDNOG00000009484	SF3B2	100	91.203	Dasypus_novemcinctus
ENSODEG00000017764	SF3B2	100	93.743	ENSDORG00000002495	Sf3b2	100	93.743	Dipodomys_ordii
ENSODEG00000017764	SF3B2	84	88.206	ENSETEG00000020284	SF3B2	83	88.206	Echinops_telfairi
ENSODEG00000017764	SF3B2	98	54.230	ENSEBUG00000013703	sf3b2	99	56.781	Eptatretus_burgeri
ENSODEG00000017764	SF3B2	100	91.880	ENSEASG00005004508	SF3B2	100	91.880	Equus_asinus_asinus
ENSODEG00000017764	SF3B2	100	91.880	ENSECAG00000024461	SF3B2	100	91.880	Equus_caballus
ENSODEG00000017764	SF3B2	60	96.875	ENSEEUG00000014278	-	60	96.875	Erinaceus_europaeus
ENSODEG00000017764	SF3B2	97	62.445	ENSELUG00000005586	sf3b2	97	62.460	Esox_lucius
ENSODEG00000017764	SF3B2	100	94.098	ENSFCAG00000013289	SF3B2	100	94.098	Felis_catus
ENSODEG00000017764	SF3B2	80	70.312	ENSFALG00000014653	SF3B2	98	68.130	Ficedula_albicollis
ENSODEG00000017764	SF3B2	100	95.017	ENSFDAG00000019806	SF3B2	100	95.017	Fukomys_damarensis
ENSODEG00000017764	SF3B2	97	63.616	ENSFHEG00000020968	sf3b2	97	63.555	Fundulus_heteroclitus
ENSODEG00000017764	SF3B2	73	73.740	ENSGMOG00000012131	sf3b2	96	76.258	Gadus_morhua
ENSODEG00000017764	SF3B2	97	65.222	ENSGAFG00000001675	sf3b2	97	63.986	Gambusia_affinis
ENSODEG00000017764	SF3B2	73	74.615	ENSGACG00000019012	sf3b2	96	75.552	Gasterosteus_aculeatus
ENSODEG00000017764	SF3B2	100	75.642	ENSGAGG00000023916	SF3B2	100	79.186	Gopherus_agassizii
ENSODEG00000017764	SF3B2	100	93.205	ENSGGOG00000028448	SF3B2	100	93.205	Gorilla_gorilla
ENSODEG00000017764	SF3B2	84	68.277	ENSHBUG00000017349	sf3b2	100	63.676	Haplochromis_burtoni
ENSODEG00000017764	SF3B2	100	95.672	ENSHGLG00000010807	SF3B2	100	95.672	Heterocephalus_glaber_female
ENSODEG00000017764	SF3B2	100	95.672	ENSHGLG00100006361	SF3B2	100	95.672	Heterocephalus_glaber_male
ENSODEG00000017764	SF3B2	97	62.215	ENSHCOG00000016203	sf3b2	97	62.057	Hippocampus_comes
ENSODEG00000017764	SF3B2	97	61.669	ENSIPUG00000009383	sf3b2	83	67.742	Ictalurus_punctatus
ENSODEG00000017764	SF3B2	100	94.875	ENSSTOG00000028892	SF3B2	100	94.875	Ictidomys_tridecemlineatus
ENSODEG00000017764	SF3B2	100	94.325	ENSJJAG00000018193	Sf3b2	100	94.325	Jaculus_jaculus
ENSODEG00000017764	SF3B2	59	82.331	ENSKMAG00000020181	sf3b2	97	64.804	Kryptolebias_marmoratus
ENSODEG00000017764	SF3B2	97	65.865	ENSLBEG00000027739	sf3b2	88	74.922	Labrus_bergylta
ENSODEG00000017764	SF3B2	82	76.279	ENSLACG00000010429	SF3B2	100	68.147	Latimeria_chalumnae
ENSODEG00000017764	SF3B2	100	93.417	ENSLAFG00000002128	SF3B2	100	93.417	Loxodonta_africana
ENSODEG00000017764	SF3B2	100	94.198	ENSMFAG00000003064	SF3B2	100	94.198	Macaca_fascicularis
ENSODEG00000017764	SF3B2	100	89.636	ENSMMUG00000011743	SF3B2	100	89.863	Macaca_mulatta
ENSODEG00000017764	SF3B2	98	95.396	ENSMNEG00000034437	SF3B2	100	92.994	Macaca_nemestrina
ENSODEG00000017764	SF3B2	100	92.881	ENSMLEG00000029373	SF3B2	100	92.881	Mandrillus_leucophaeus
ENSODEG00000017764	SF3B2	83	69.201	ENSMAMG00000014103	sf3b2	97	65.116	Mastacembelus_armatus
ENSODEG00000017764	SF3B2	84	68.277	ENSMZEG00005020789	sf3b2	100	63.676	Maylandia_zebra
ENSODEG00000017764	SF3B2	63	95.122	ENSMAUG00000017040	Sf3b2	100	95.122	Mesocricetus_auratus
ENSODEG00000017764	SF3B2	100	94.077	ENSMICG00000008565	-	100	94.077	Microcebus_murinus
ENSODEG00000017764	SF3B2	100	88.740	ENSMICG00000016942	-	100	86.569	Microcebus_murinus
ENSODEG00000017764	SF3B2	100	94.305	ENSMOCG00000003136	Sf3b2	100	94.305	Microtus_ochrogaster
ENSODEG00000017764	SF3B2	97	62.656	ENSMMOG00000012928	sf3b2	100	60.874	Mola_mola
ENSODEG00000017764	SF3B2	71	83.465	ENSMODG00000025020	-	99	83.150	Monodelphis_domestica
ENSODEG00000017764	SF3B2	85	86.755	ENSMODG00000008490	-	93	88.497	Monodelphis_domestica
ENSODEG00000017764	SF3B2	85	66.623	ENSMALG00000015137	sf3b2	97	63.417	Monopterus_albus
ENSODEG00000017764	SF3B2	100	93.622	MGP_CAROLIEiJ_G0022539	Sf3b2	100	93.622	Mus_caroli
ENSODEG00000017764	SF3B2	100	94.191	ENSMUSG00000024853	Sf3b2	100	94.191	Mus_musculus
ENSODEG00000017764	SF3B2	100	94.191	MGP_PahariEiJ_G0014036	Sf3b2	100	94.191	Mus_pahari
ENSODEG00000017764	SF3B2	100	94.077	MGP_SPRETEiJ_G0023453	Sf3b2	100	94.077	Mus_spretus
ENSODEG00000017764	SF3B2	100	92.094	ENSMPUG00000011349	SF3B2	100	92.094	Mustela_putorius_furo
ENSODEG00000017764	SF3B2	100	90.656	ENSMLUG00000011136	SF3B2	100	91.212	Myotis_lucifugus
ENSODEG00000017764	SF3B2	100	94.533	ENSNGAG00000012103	Sf3b2	100	94.533	Nannospalax_galili
ENSODEG00000017764	SF3B2	100	88.488	ENSNLEG00000006007	SF3B2	100	88.600	Nomascus_leucogenys
ENSODEG00000017764	SF3B2	86	84.943	ENSMEUG00000000019	SF3B2	81	85.227	Notamacropus_eugenii
ENSODEG00000017764	SF3B2	97	64.726	ENSONIG00000013068	sf3b2	100	66.591	Oreochromis_niloticus
ENSODEG00000017764	SF3B2	87	76.992	ENSOANG00000012482	SF3B2	98	77.398	Ornithorhynchus_anatinus
ENSODEG00000017764	SF3B2	64	65.065	ENSOCUG00000024154	-	100	65.434	Oryctolagus_cuniculus
ENSODEG00000017764	SF3B2	100	86.369	ENSOCUG00000015722	-	100	86.816	Oryctolagus_cuniculus
ENSODEG00000017764	SF3B2	97	63.080	ENSORLG00000008235	sf3b2	94	64.220	Oryzias_latipes
ENSODEG00000017764	SF3B2	97	63.080	ENSORLG00020005357	sf3b2	97	64.220	Oryzias_latipes_hni
ENSODEG00000017764	SF3B2	97	63.194	ENSORLG00015022454	sf3b2	82	73.418	Oryzias_latipes_hsok
ENSODEG00000017764	SF3B2	97	62.799	ENSOMEG00000017480	sf3b2	97	64.023	Oryzias_melastigma
ENSODEG00000017764	SF3B2	100	86.257	ENSOGAG00000005799	SF3B2	100	87.039	Otolemur_garnettii
ENSODEG00000017764	SF3B2	100	90.034	ENSOARG00000002125	SF3B2	100	91.057	Ovis_aries
ENSODEG00000017764	SF3B2	100	92.402	ENSPPAG00000007359	SF3B2	100	92.402	Pan_paniscus
ENSODEG00000017764	SF3B2	100	94.098	ENSPPRG00000013334	SF3B2	100	94.098	Panthera_pardus
ENSODEG00000017764	SF3B2	100	93.984	ENSPTIG00000015022	SF3B2	100	93.984	Panthera_tigris_altaica
ENSODEG00000017764	SF3B2	100	92.402	ENSPTRG00000003912	SF3B2	100	92.402	Pan_troglodytes
ENSODEG00000017764	SF3B2	100	94.305	ENSPANG00000008593	SF3B2	100	94.305	Papio_anubis
ENSODEG00000017764	SF3B2	97	63.555	ENSPKIG00000016576	sf3b2	94	67.968	Paramormyrops_kingsleyae
ENSODEG00000017764	SF3B2	93	77.143	ENSPSIG00000003158	SF3B2	100	83.468	Pelodiscus_sinensis
ENSODEG00000017764	SF3B2	84	62.141	ENSPMGG00000000819	sf3b2	97	57.606	Periophthalmus_magnuspinnatus
ENSODEG00000017764	SF3B2	100	94.647	ENSPEMG00000015437	Sf3b2	100	94.647	Peromyscus_maniculatus_bairdii
ENSODEG00000017764	SF3B2	93	80.000	ENSPEMG00000015451	-	100	80.000	Peromyscus_maniculatus_bairdii
ENSODEG00000017764	SF3B2	100	84.333	ENSPCIG00000008381	SF3B2	100	86.333	Phascolarctos_cinereus
ENSODEG00000017764	SF3B2	97	65.600	ENSPFOG00000002552	sf3b2	97	64.286	Poecilia_formosa
ENSODEG00000017764	SF3B2	97	65.714	ENSPLAG00000001471	sf3b2	97	64.123	Poecilia_latipinna
ENSODEG00000017764	SF3B2	97	64.229	ENSPMEG00000013180	sf3b2	97	65.376	Poecilia_mexicana
ENSODEG00000017764	SF3B2	84	68.296	ENSPREG00000002665	sf3b2	97	62.304	Poecilia_reticulata
ENSODEG00000017764	SF3B2	77	92.697	ENSPPYG00000003034	-	99	92.697	Pongo_abelii
ENSODEG00000017764	SF3B2	100	90.535	ENSPCAG00000005129	SF3B2	100	91.203	Procavia_capensis
ENSODEG00000017764	SF3B2	100	94.305	ENSPCOG00000025375	SF3B2	100	94.305	Propithecus_coquereli
ENSODEG00000017764	SF3B2	56	99.561	ENSPVAG00000005466	-	82	99.561	Pteropus_vampyrus
ENSODEG00000017764	SF3B2	54	95.000	ENSPVAG00000016975	-	55	95.000	Pteropus_vampyrus
ENSODEG00000017764	SF3B2	83	67.925	ENSPNYG00000023594	sf3b2	92	70.055	Pundamilia_nyererei
ENSODEG00000017764	SF3B2	97	63.698	ENSPNAG00000001891	sf3b2	98	61.774	Pygocentrus_nattereri
ENSODEG00000017764	SF3B2	100	94.077	ENSRNOG00000020412	Sf3b2	100	94.077	Rattus_norvegicus
ENSODEG00000017764	SF3B2	100	94.191	ENSRBIG00000034065	SF3B2	100	94.191	Rhinopithecus_bieti
ENSODEG00000017764	SF3B2	100	94.191	ENSRROG00000034496	SF3B2	100	94.191	Rhinopithecus_roxellana
ENSODEG00000017764	SF3B2	100	89.369	ENSSBOG00000026337	SF3B2	100	90.144	Saimiri_boliviensis_boliviensis
ENSODEG00000017764	SF3B2	100	76.445	ENSSHAG00000010933	-	100	79.646	Sarcophilus_harrisii
ENSODEG00000017764	SF3B2	96	66.047	ENSSHAG00000018043	-	100	66.860	Sarcophilus_harrisii
ENSODEG00000017764	SF3B2	97	63.464	ENSSFOG00015021125	sf3b2	97	64.699	Scleropages_formosus
ENSODEG00000017764	SF3B2	58	81.973	ENSSMAG00000004079	sf3b2	97	63.735	Scophthalmus_maximus
ENSODEG00000017764	SF3B2	58	81.973	ENSSDUG00000008499	sf3b2	97	62.416	Seriola_dumerili
ENSODEG00000017764	SF3B2	58	82.543	ENSSLDG00000006838	sf3b2	97	66.516	Seriola_lalandi_dorsalis
ENSODEG00000017764	SF3B2	50	99.206	ENSSARG00000003707	-	68	99.206	Sorex_araneus
ENSODEG00000017764	SF3B2	100	77.171	ENSSPUG00000009198	SF3B2	100	76.923	Sphenodon_punctatus
ENSODEG00000017764	SF3B2	97	63.485	ENSSPAG00000004406	sf3b2	97	65.198	Stegastes_partitus
ENSODEG00000017764	SF3B2	100	91.759	ENSSSCG00000012957	SF3B2	100	94.231	Sus_scrofa
ENSODEG00000017764	SF3B2	97	51.200	ENSTRUG00000007611	sf3b2	88	67.504	Takifugu_rubripes
ENSODEG00000017764	SF3B2	97	62.049	ENSTNIG00000007441	sf3b2	100	61.066	Tetraodon_nigroviridis
ENSODEG00000017764	SF3B2	91	93.023	ENSTBEG00000004258	SF3B2	82	94.757	Tupaia_belangeri
ENSODEG00000017764	SF3B2	100	91.871	ENSTTRG00000014339	SF3B2	100	91.871	Tursiops_truncatus
ENSODEG00000017764	SF3B2	98	95.294	ENSUAMG00000020754	SF3B2	99	94.628	Ursus_americanus
ENSODEG00000017764	SF3B2	100	92.316	ENSUMAG00000010994	SF3B2	100	92.316	Ursus_maritimus
ENSODEG00000017764	SF3B2	65	84.774	ENSVPAG00000008695	SF3B2	72	85.185	Vicugna_pacos
ENSODEG00000017764	SF3B2	100	92.094	ENSVVUG00000027029	SF3B2	100	92.094	Vulpes_vulpes
ENSODEG00000017764	SF3B2	87	67.526	ENSXETG00000008422	sf3b2	87	74.015	Xenopus_tropicalis
ENSODEG00000017764	SF3B2	71	74.286	ENSXCOG00000008943	sf3b2	84	73.175	Xiphophorus_couchianus
ENSODEG00000017764	SF3B2	59	82.075	ENSXMAG00000008467	sf3b2	97	63.832	Xiphophorus_maculatus