EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000017785 (Gene tree)
Gene ID: 101592457
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 22280 bases
Position: chrJH651613.1:5507593-5529872
Accession: 101592457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024307	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024582	CHD3-201	5967	XM_012516274	ENSODEP00000024307	1988 (aa)	XP_023578944	-

Gene Model

Click here to download ENSODEG00000017785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000017785	CHD3	95	69.554	ENSODEG00000010262	CHD5	99	69.369
ENSODEG00000017785	CHD3	90	70.469	ENSODEG00000003114	-	95	69.577

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017785	CHD3	100	97.688	ENSG00000170004	CHD3	99	97.688	Homo_sapiens
ENSODEG00000017785	CHD3	79	79.771	ENSAPOG00000005614	chd3	94	80.344	Acanthochromis_polyacanthus
ENSODEG00000017785	CHD3	69	96.848	ENSAMEG00000003025	-	100	96.848	Ailuropoda_melanoleuca
ENSODEG00000017785	CHD3	80	87.791	ENSACIG00000019671	chd3	99	87.791	Amphilophus_citrinellus
ENSODEG00000017785	CHD3	79	80.744	ENSAOCG00000023784	chd3	97	81.675	Amphiprion_ocellaris
ENSODEG00000017785	CHD3	75	77.169	ENSAPEG00000006341	chd3	96	73.560	Amphiprion_percula
ENSODEG00000017785	CHD3	97	72.623	ENSATEG00000000848	chd3	99	72.903	Anabas_testudineus
ENSODEG00000017785	CHD3	97	85.105	ENSACAG00000004276	CHD3	96	84.465	Anolis_carolinensis
ENSODEG00000017785	CHD3	100	94.774	ENSANAG00000034323	CHD3	99	98.238	Aotus_nancymaae
ENSODEG00000017785	CHD3	91	80.707	ENSACLG00000009222	chd3	99	73.457	Astatotilapia_calliptera
ENSODEG00000017785	CHD3	99	97.562	ENSBTAG00000014377	CHD3	97	97.552	Bos_taurus
ENSODEG00000017785	CHD3	100	97.588	ENSCJAG00000014766	CHD3	99	97.588	Callithrix_jacchus
ENSODEG00000017785	CHD3	99	97.273	ENSCAFG00000016859	CHD3	99	97.273	Canis_familiaris
ENSODEG00000017785	CHD3	94	97.492	ENSCAFG00020007422	CHD3	100	97.490	Canis_lupus_dingo
ENSODEG00000017785	CHD3	99	97.224	ENSCHIG00000016737	CHD3	99	97.224	Capra_hircus
ENSODEG00000017785	CHD3	100	97.437	ENSTSYG00000035658	CHD3	99	97.437	Carlito_syrichta
ENSODEG00000017785	CHD3	100	94.673	ENSCAPG00000014864	CHD3	99	94.673	Cavia_aperea
ENSODEG00000017785	CHD3	100	97.186	ENSCPOG00000022653	CHD3	99	97.186	Cavia_porcellus
ENSODEG00000017785	CHD3	100	97.437	ENSCCAG00000034792	CHD3	99	97.437	Cebus_capucinus
ENSODEG00000017785	CHD3	100	97.437	ENSCATG00000041717	CHD3	99	97.437	Cercocebus_atys
ENSODEG00000017785	CHD3	99	98.831	ENSCLAG00000010523	CHD3	100	98.831	Chinchilla_lanigera
ENSODEG00000017785	CHD3	99	97.764	ENSCSAG00000011122	CHD3	99	97.764	Chlorocebus_sabaeus
ENSODEG00000017785	CHD3	90	83.352	ENSCPBG00000011966	CHD3	99	86.623	Chrysemys_picta_bellii
ENSODEG00000017785	CHD3	100	97.387	ENSCANG00000037641	CHD3	99	97.387	Colobus_angolensis_palliatus
ENSODEG00000017785	CHD3	99	96.951	ENSCGRG00001011306	Chd3	100	96.951	Cricetulus_griseus_chok1gshd
ENSODEG00000017785	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSODEG00000017785	CHD3	90	79.868	ENSCSEG00000004489	chd3	99	76.008	Cynoglossus_semilaevis
ENSODEG00000017785	CHD3	87	79.615	ENSCVAG00000007293	chd3	96	79.615	Cyprinodon_variegatus
ENSODEG00000017785	CHD3	86	85.660	ENSDARG00000021405	chd3	99	75.445	Danio_rerio
ENSODEG00000017785	CHD3	99	83.013	ENSDNOG00000047846	CHD3	98	83.013	Dasypus_novemcinctus
ENSODEG00000017785	CHD3	99	97.204	ENSDORG00000010713	Chd3	100	97.204	Dipodomys_ordii
ENSODEG00000017785	CHD3	97	91.230	ENSETEG00000017733	CHD3	100	91.230	Echinops_telfairi
ENSODEG00000017785	CHD3	53	77.910	ENSEBUG00000008310	chd3	99	70.351	Eptatretus_burgeri
ENSODEG00000017785	CHD3	92	97.818	ENSEASG00005019360	CHD3	100	97.818	Equus_asinus_asinus
ENSODEG00000017785	CHD3	92	97.763	ENSECAG00000010051	CHD3	100	97.763	Equus_caballus
ENSODEG00000017785	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSODEG00000017785	CHD3	77	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSODEG00000017785	CHD3	99	97.358	ENSFCAG00000009629	CHD3	96	97.358	Felis_catus
ENSODEG00000017785	CHD3	99	95.810	ENSFDAG00000008220	CHD3	99	95.810	Fukomys_damarensis
ENSODEG00000017785	CHD3	88	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSODEG00000017785	CHD3	59	74.744	ENSGAFG00000004055	chd3	99	76.410	Gambusia_affinis
ENSODEG00000017785	CHD3	98	70.669	ENSGACG00000019275	chd3	100	70.724	Gasterosteus_aculeatus
ENSODEG00000017785	CHD3	75	85.762	ENSGAGG00000013164	CHD3	94	90.954	Gopherus_agassizii
ENSODEG00000017785	CHD3	100	97.588	ENSGGOG00000013496	CHD3	99	97.588	Gorilla_gorilla
ENSODEG00000017785	CHD3	99	98.577	ENSHGLG00000012017	CHD3	99	98.081	Heterocephalus_glaber_female
ENSODEG00000017785	CHD3	88	91.594	ENSHGLG00100013902	CHD3	99	91.594	Heterocephalus_glaber_male
ENSODEG00000017785	CHD3	94	72.385	ENSHCOG00000010170	chd3	96	73.065	Hippocampus_comes
ENSODEG00000017785	CHD3	83	80.212	ENSIPUG00000003271	chd3	93	80.365	Ictalurus_punctatus
ENSODEG00000017785	CHD3	100	97.284	ENSSTOG00000025907	CHD3	99	97.867	Ictidomys_tridecemlineatus
ENSODEG00000017785	CHD3	99	96.900	ENSJJAG00000017633	Chd3	100	96.899	Jaculus_jaculus
ENSODEG00000017785	CHD3	83	90.047	ENSKMAG00000019292	chd3	97	74.590	Kryptolebias_marmoratus
ENSODEG00000017785	CHD3	89	75.986	ENSLBEG00000028485	chd3	91	87.826	Labrus_bergylta
ENSODEG00000017785	CHD3	96	74.317	ENSLACG00000008031	CHD3	99	73.531	Latimeria_chalumnae
ENSODEG00000017785	CHD3	97	77.004	ENSLOCG00000013965	chd3	97	77.448	Lepisosteus_oculatus
ENSODEG00000017785	CHD3	95	93.641	ENSLAFG00000000572	CHD3	100	93.641	Loxodonta_africana
ENSODEG00000017785	CHD3	100	97.437	ENSMFAG00000020113	CHD3	99	97.437	Macaca_fascicularis
ENSODEG00000017785	CHD3	100	95.075	ENSMMUG00000022221	CHD3	99	95.075	Macaca_mulatta
ENSODEG00000017785	CHD3	100	97.387	ENSMNEG00000001728	CHD3	99	97.387	Macaca_nemestrina
ENSODEG00000017785	CHD3	100	97.437	ENSMLEG00000032249	CHD3	99	97.437	Mandrillus_leucophaeus
ENSODEG00000017785	CHD3	85	75.556	ENSMAMG00000000564	chd3	99	76.257	Mastacembelus_armatus
ENSODEG00000017785	CHD3	99	96.552	ENSMAUG00000013873	Chd3	99	93.931	Mesocricetus_auratus
ENSODEG00000017785	CHD3	99	98.018	ENSMICG00000008741	CHD3	96	98.018	Microcebus_murinus
ENSODEG00000017785	CHD3	99	97.047	ENSMOCG00000004848	Chd3	100	97.047	Microtus_ochrogaster
ENSODEG00000017785	CHD3	95	74.088	ENSMMOG00000012699	chd3	99	73.579	Mola_mola
ENSODEG00000017785	CHD3	92	92.530	ENSMODG00000007509	CHD3	100	92.475	Monodelphis_domestica
ENSODEG00000017785	CHD3	99	96.854	MGP_CAROLIEiJ_G0016564	Chd3	100	95.417	Mus_caroli
ENSODEG00000017785	CHD3	99	97.057	ENSMUSG00000018474	Chd3	99	95.625	Mus_musculus
ENSODEG00000017785	CHD3	99	97.157	MGP_PahariEiJ_G0017695	Chd3	100	95.727	Mus_pahari
ENSODEG00000017785	CHD3	99	97.057	MGP_SPRETEiJ_G0017400	Chd3	100	95.625	Mus_spretus
ENSODEG00000017785	CHD3	86	97.491	ENSMPUG00000008861	CHD3	100	97.491	Mustela_putorius_furo
ENSODEG00000017785	CHD3	100	96.386	ENSMLUG00000014643	-	99	96.386	Myotis_lucifugus
ENSODEG00000017785	CHD3	99	97.123	ENSNGAG00000000773	Chd3	98	97.123	Nannospalax_galili
ENSODEG00000017785	CHD3	85	75.117	ENSNBRG00000000636	chd3	97	75.587	Neolamprologus_brichardi
ENSODEG00000017785	CHD3	99	93.630	ENSNLEG00000009770	CHD3	100	94.862	Nomascus_leucogenys
ENSODEG00000017785	CHD3	85	91.209	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSODEG00000017785	CHD3	94	96.316	ENSOPRG00000011069	CHD3	100	96.316	Ochotona_princeps
ENSODEG00000017785	CHD3	75	77.683	ENSONIG00000009292	chd3	100	74.795	Oreochromis_niloticus
ENSODEG00000017785	CHD3	98	93.133	ENSOCUG00000029299	CHD3	100	92.984	Oryctolagus_cuniculus
ENSODEG00000017785	CHD3	82	70.705	ENSORLG00000007107	chd3	93	70.688	Oryzias_latipes
ENSODEG00000017785	CHD3	57	72.816	ENSORLG00020008387	chd3	95	73.522	Oryzias_latipes_hni
ENSODEG00000017785	CHD3	70	80.286	ENSOMEG00000013691	chd3	99	76.986	Oryzias_melastigma
ENSODEG00000017785	CHD3	99	97.664	ENSOGAG00000003216	CHD3	99	97.664	Otolemur_garnettii
ENSODEG00000017785	CHD3	99	94.819	ENSOARG00000017855	CHD3	99	94.819	Ovis_aries
ENSODEG00000017785	CHD3	100	95.344	ENSPPAG00000032886	CHD3	99	95.344	Pan_paniscus
ENSODEG00000017785	CHD3	99	97.509	ENSPPRG00000000626	CHD3	99	97.123	Panthera_pardus
ENSODEG00000017785	CHD3	100	97.739	ENSPTRG00000008714	CHD3	99	97.739	Pan_troglodytes
ENSODEG00000017785	CHD3	100	97.437	ENSPANG00000023938	CHD3	99	97.437	Papio_anubis
ENSODEG00000017785	CHD3	98	75.262	ENSPKIG00000006305	chd3	99	79.257	Paramormyrops_kingsleyae
ENSODEG00000017785	CHD3	54	90.420	ENSPSIG00000010177	CHD3	98	90.693	Pelodiscus_sinensis
ENSODEG00000017785	CHD3	99	96.418	ENSPEMG00000014262	Chd3	100	96.418	Peromyscus_maniculatus_bairdii
ENSODEG00000017785	CHD3	99	92.585	ENSPCIG00000005442	CHD3	97	95.528	Phascolarctos_cinereus
ENSODEG00000017785	CHD3	75	76.471	ENSPFOG00000012464	chd3	92	73.959	Poecilia_formosa
ENSODEG00000017785	CHD3	87	82.996	ENSPLAG00000002887	chd3	96	82.996	Poecilia_latipinna
ENSODEG00000017785	CHD3	53	81.141	ENSPMEG00000016725	chd3	94	72.987	Poecilia_mexicana
ENSODEG00000017785	CHD3	92	80.769	ENSPREG00000011044	chd3	99	78.456	Poecilia_reticulata
ENSODEG00000017785	CHD3	100	93.058	ENSPPYG00000007940	CHD3	99	93.058	Pongo_abelii
ENSODEG00000017785	CHD3	95	97.208	ENSPCAG00000004350	CHD3	96	97.208	Procavia_capensis
ENSODEG00000017785	CHD3	100	97.285	ENSPCOG00000020952	CHD3	99	97.285	Propithecus_coquereli
ENSODEG00000017785	CHD3	86	96.043	ENSPVAG00000016344	CHD3	87	96.043	Pteropus_vampyrus
ENSODEG00000017785	CHD3	85	82.246	ENSPNAG00000020393	chd3	98	82.246	Pygocentrus_nattereri
ENSODEG00000017785	CHD3	92	96.569	ENSRNOG00000009722	Chd3	100	96.569	Rattus_norvegicus
ENSODEG00000017785	CHD3	100	94.494	ENSRBIG00000033562	CHD3	99	94.494	Rhinopithecus_bieti
ENSODEG00000017785	CHD3	100	96.030	ENSRROG00000029554	CHD3	100	96.084	Rhinopithecus_roxellana
ENSODEG00000017785	CHD3	100	97.688	ENSSBOG00000020719	CHD3	99	97.688	Saimiri_boliviensis_boliviensis
ENSODEG00000017785	CHD3	99	92.857	ENSSHAG00000014412	CHD3	100	92.806	Sarcophilus_harrisii
ENSODEG00000017785	CHD3	87	79.743	ENSSFOG00015023123	chd3	98	74.790	Scleropages_formosus
ENSODEG00000017785	CHD3	78	91.304	ENSSMAG00000006451	chd3	99	74.781	Scophthalmus_maximus
ENSODEG00000017785	CHD3	55	72.527	ENSSDUG00000005792	chd3	95	73.260	Seriola_dumerili
ENSODEG00000017785	CHD3	80	87.209	ENSSPAG00000013694	chd3	99	78.352	Stegastes_partitus
ENSODEG00000017785	CHD3	99	97.412	ENSSSCG00000021363	CHD3	100	97.328	Sus_scrofa
ENSODEG00000017785	CHD3	74	76.494	ENSTRUG00000014990	chd3	89	76.106	Takifugu_rubripes
ENSODEG00000017785	CHD3	97	72.760	ENSTNIG00000012998	chd3	99	72.314	Tetraodon_nigroviridis
ENSODEG00000017785	CHD3	63	97.608	ENSTBEG00000011454	-	71	97.608	Tupaia_belangeri
ENSODEG00000017785	CHD3	98	98.035	ENSTTRG00000010295	CHD3	97	98.035	Tursiops_truncatus
ENSODEG00000017785	CHD3	92	96.625	ENSUAMG00000005475	CHD3	99	96.625	Ursus_americanus
ENSODEG00000017785	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSODEG00000017785	CHD3	95	97.458	ENSVVUG00000028011	CHD3	98	97.492	Vulpes_vulpes
ENSODEG00000017785	CHD3	97	72.686	ENSXETG00000012991	chd3	97	71.358	Xenopus_tropicalis
ENSODEG00000017785	CHD3	51	82.751	ENSXCOG00000000809	chd3	96	82.864	Xiphophorus_couchianus
ENSODEG00000017785	CHD3	80	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus