EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000017858 (Gene tree)
Gene ID: 101591261
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 19674 bases
Position: chrJH651571.1:9267464-9287137
Accession: 101591261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024402	Btz	PF09405.10	1.1e-23	1	1
ENSODEP00000024401	Btz	PF09405.10	1.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024677	CASC3-202	2106	-	ENSODEP00000024402	701 (aa)	-	-
ENSODET00000024676	CASC3-201	2121	XM_004633721	ENSODEP00000024401	706 (aa)	XP_004633778	UPI000333DFEF

Gene Model

Click here to download ENSODEG00000017858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017858's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017858	CASC3	100	89.802	ENSG00000108349	CASC3	100	89.518	Homo_sapiens
ENSODEG00000017858	CASC3	100	90.510	ENSAMEG00000007764	CASC3	100	90.227	Ailuropoda_melanoleuca
ENSODEG00000017858	CASC3	77	55.556	ENSATEG00000017196	casc3	69	55.200	Anabas_testudineus
ENSODEG00000017858	CASC3	90	69.846	ENSACAG00000002674	CASC3	99	65.342	Anolis_carolinensis
ENSODEG00000017858	CASC3	65	94.762	ENSANAG00000031954	-	100	94.762	Aotus_nancymaae
ENSODEG00000017858	CASC3	99	78.324	ENSANAG00000034820	-	99	83.481	Aotus_nancymaae
ENSODEG00000017858	CASC3	100	88.810	ENSBTAG00000006250	CASC3	100	88.527	Bos_taurus
ENSODEG00000017858	CASC3	100	87.394	ENSCJAG00000016032	CASC3	100	87.110	Callithrix_jacchus
ENSODEG00000017858	CASC3	100	90.227	ENSCAFG00000016141	CASC3	100	89.943	Canis_familiaris
ENSODEG00000017858	CASC3	100	89.392	ENSCAFG00020018882	CASC3	100	91.503	Canis_lupus_dingo
ENSODEG00000017858	CASC3	100	88.478	ENSCHIG00000006338	CASC3	100	88.193	Capra_hircus
ENSODEG00000017858	CASC3	89	90.895	ENSTSYG00000002975	CASC3	89	90.851	Carlito_syrichta
ENSODEG00000017858	CASC3	88	92.370	ENSCAPG00000010514	CASC3	100	92.370	Cavia_aperea
ENSODEG00000017858	CASC3	100	91.501	ENSCPOG00000015139	CASC3	100	91.218	Cavia_porcellus
ENSODEG00000017858	CASC3	100	88.260	ENSCCAG00000033620	CASC3	100	88.543	Cebus_capucinus
ENSODEG00000017858	CASC3	100	90.099	ENSCATG00000033593	CASC3	100	89.816	Cercocebus_atys
ENSODEG00000017858	CASC3	100	94.193	ENSCLAG00000013730	CASC3	100	93.909	Chinchilla_lanigera
ENSODEG00000017858	CASC3	100	90.240	ENSCSAG00000002777	CASC3	100	89.958	Chlorocebus_sabaeus
ENSODEG00000017858	CASC3	99	72.028	ENSCPBG00000004750	CASC3	98	72.868	Chrysemys_picta_bellii
ENSODEG00000017858	CASC3	100	89.958	ENSCANG00000008814	CASC3	100	89.675	Colobus_angolensis_palliatus
ENSODEG00000017858	CASC3	100	88.952	ENSCGRG00001014706	Casc3	100	87.535	Cricetulus_griseus_chok1gshd
ENSODEG00000017858	CASC3	100	82.011	ENSCGRG00000001952	Casc3	96	89.085	Cricetulus_griseus_crigri
ENSODEG00000017858	CASC3	78	50.955	ENSCSEG00000010047	casc3	76	49.835	Cynoglossus_semilaevis
ENSODEG00000017858	CASC3	100	90.793	ENSDNOG00000017249	CASC3	96	90.510	Dasypus_novemcinctus
ENSODEG00000017858	CASC3	100	83.428	ENSETEG00000013720	CASC3	100	83.144	Echinops_telfairi
ENSODEG00000017858	CASC3	99	36.053	ENSEBUG00000010654	casc3	98	36.460	Eptatretus_burgeri
ENSODEG00000017858	CASC3	100	88.983	ENSEASG00005002909	CASC3	100	91.262	Equus_asinus_asinus
ENSODEG00000017858	CASC3	100	90.085	ENSECAG00000019947	CASC3	88	89.802	Equus_caballus
ENSODEG00000017858	CASC3	73	84.854	ENSEEUG00000014253	CASC3	100	83.495	Erinaceus_europaeus
ENSODEG00000017858	CASC3	100	90.652	ENSFCAG00000014998	CASC3	100	90.368	Felis_catus
ENSODEG00000017858	CASC3	88	71.160	ENSFALG00000000412	CASC3	98	71.339	Ficedula_albicollis
ENSODEG00000017858	CASC3	93	90.644	ENSFDAG00000020696	CASC3	100	90.644	Fukomys_damarensis
ENSODEG00000017858	CASC3	81	55.144	ENSFHEG00000015793	casc3	77	54.019	Fundulus_heteroclitus
ENSODEG00000017858	CASC3	90	74.057	ENSGALG00000031813	CASC3	99	68.175	Gallus_gallus
ENSODEG00000017858	CASC3	82	50.489	ENSGAFG00000017148	casc3	67	48.734	Gambusia_affinis
ENSODEG00000017858	CASC3	89	74.801	ENSGAGG00000008432	CASC3	93	81.651	Gopherus_agassizii
ENSODEG00000017858	CASC3	100	89.660	ENSGGOG00000005067	CASC3	100	89.377	Gorilla_gorilla
ENSODEG00000017858	CASC3	100	92.068	ENSHGLG00000012117	CASC3	100	91.785	Heterocephalus_glaber_female
ENSODEG00000017858	CASC3	89	91.693	ENSHGLG00100002268	CASC3	99	91.653	Heterocephalus_glaber_male
ENSODEG00000017858	CASC3	100	90.368	ENSSTOG00000006374	CASC3	100	90.085	Ictidomys_tridecemlineatus
ENSODEG00000017858	CASC3	100	87.677	ENSJJAG00000023525	Casc3	100	87.535	Jaculus_jaculus
ENSODEG00000017858	CASC3	63	62.185	ENSKMAG00000019507	casc3	81	49.303	Kryptolebias_marmoratus
ENSODEG00000017858	CASC3	76	50.746	ENSLBEG00000005435	casc3	56	64.848	Labrus_bergylta
ENSODEG00000017858	CASC3	98	56.583	ENSLACG00000013200	CASC3	99	55.495	Latimeria_chalumnae
ENSODEG00000017858	CASC3	69	72.464	ENSLOCG00000013518	casc3	65	69.565	Lepisosteus_oculatus
ENSODEG00000017858	CASC3	100	88.952	ENSLAFG00000000606	CASC3	100	88.669	Loxodonta_africana
ENSODEG00000017858	CASC3	100	90.099	ENSMFAG00000041496	CASC3	100	92.787	Macaca_fascicularis
ENSODEG00000017858	CASC3	100	90.099	ENSMMUG00000045187	CASC3	100	89.816	Macaca_mulatta
ENSODEG00000017858	CASC3	89	90.112	ENSMLEG00000029049	CASC3	99	89.155	Mandrillus_leucophaeus
ENSODEG00000017858	CASC3	75	54.902	ENSMAMG00000005235	casc3	69	56.299	Mastacembelus_armatus
ENSODEG00000017858	CASC3	86	73.520	ENSMGAG00000013247	CASC3	99	71.545	Meleagris_gallopavo
ENSODEG00000017858	CASC3	71	87.600	ENSMAUG00000006023	Casc3	96	87.251	Mesocricetus_auratus
ENSODEG00000017858	CASC3	100	88.402	ENSMICG00000003321	CASC3	100	89.533	Microcebus_murinus
ENSODEG00000017858	CASC3	100	88.385	ENSMOCG00000013644	Casc3	100	85.977	Microtus_ochrogaster
ENSODEG00000017858	CASC3	100	75.565	ENSMODG00000013044	CASC3	92	75.847	Monodelphis_domestica
ENSODEG00000017858	CASC3	100	87.677	MGP_CAROLIEiJ_G0017099	Casc3	100	85.977	Mus_caroli
ENSODEG00000017858	CASC3	100	87.252	ENSMUSG00000078676	Casc3	100	85.552	Mus_musculus
ENSODEG00000017858	CASC3	100	87.394	MGP_SPRETEiJ_G0017943	Casc3	100	85.694	Mus_spretus
ENSODEG00000017858	CASC3	100	90.368	ENSMPUG00000014903	CASC3	100	90.085	Mustela_putorius_furo
ENSODEG00000017858	CASC3	100	87.288	ENSMLUG00000010520	CASC3	100	87.429	Myotis_lucifugus
ENSODEG00000017858	CASC3	100	87.960	ENSNGAG00000023121	Casc3	100	86.544	Nannospalax_galili
ENSODEG00000017858	CASC3	100	88.385	ENSNLEG00000001598	CASC3	100	88.102	Nomascus_leucogenys
ENSODEG00000017858	CASC3	73	85.243	ENSOPRG00000007240	-	79	95.833	Ochotona_princeps
ENSODEG00000017858	CASC3	79	53.152	ENSOANG00000003499	-	84	69.896	Ornithorhynchus_anatinus
ENSODEG00000017858	CASC3	100	89.377	ENSOCUG00000002954	CASC3	100	88.810	Oryctolagus_cuniculus
ENSODEG00000017858	CASC3	100	89.140	ENSOGAG00000034486	CASC3	98	89.316	Otolemur_garnettii
ENSODEG00000017858	CASC3	100	88.952	ENSOARG00000013239	CASC3	100	88.669	Ovis_aries
ENSODEG00000017858	CASC3	100	89.802	ENSPPAG00000035069	CASC3	100	89.518	Pan_paniscus
ENSODEG00000017858	CASC3	100	90.652	ENSPPRG00000023670	CASC3	100	90.368	Panthera_pardus
ENSODEG00000017858	CASC3	90	90.267	ENSPTIG00000010891	CASC3	91	90.267	Panthera_tigris_altaica
ENSODEG00000017858	CASC3	100	90.099	ENSPANG00000021708	CASC3	100	89.816	Papio_anubis
ENSODEG00000017858	CASC3	99	47.342	ENSPKIG00000023186	casc3	98	45.262	Paramormyrops_kingsleyae
ENSODEG00000017858	CASC3	100	88.527	ENSPEMG00000009774	Casc3	100	86.827	Peromyscus_maniculatus_bairdii
ENSODEG00000017858	CASC3	100	79.379	ENSPCIG00000025678	CASC3	100	79.096	Phascolarctos_cinereus
ENSODEG00000017858	CASC3	75	56.306	ENSPFOG00000017632	casc3	92	48.239	Poecilia_formosa
ENSODEG00000017858	CASC3	81	54.400	ENSPLAG00000005268	casc3	71	55.814	Poecilia_latipinna
ENSODEG00000017858	CASC3	63	48.571	ENSPMEG00000010299	casc3	73	48.009	Poecilia_mexicana
ENSODEG00000017858	CASC3	65	67.857	ENSPREG00000011856	casc3	65	66.216	Poecilia_reticulata
ENSODEG00000017858	CASC3	100	88.244	ENSPPYG00000008467	CASC3	100	89.093	Pongo_abelii
ENSODEG00000017858	CASC3	100	87.977	ENSPCOG00000008183	CASC3	100	89.109	Propithecus_coquereli
ENSODEG00000017858	CASC3	100	89.235	ENSPVAG00000008556	CASC3	100	88.952	Pteropus_vampyrus
ENSODEG00000017858	CASC3	91	91.148	ENSRNOG00000009716	Casc3	100	88.791	Rattus_norvegicus
ENSODEG00000017858	CASC3	100	90.240	ENSRBIG00000033289	CASC3	100	89.601	Rhinopithecus_bieti
ENSODEG00000017858	CASC3	100	90.240	ENSRROG00000022337	CASC3	100	89.958	Rhinopithecus_roxellana
ENSODEG00000017858	CASC3	88	87.379	ENSSBOG00000031406	CASC3	98	88.997	Saimiri_boliviensis_boliviensis
ENSODEG00000017858	CASC3	89	81.210	ENSSHAG00000013338	CASC3	100	80.255	Sarcophilus_harrisii
ENSODEG00000017858	CASC3	66	67.361	ENSSMAG00000016096	casc3	61	62.069	Scophthalmus_maximus
ENSODEG00000017858	CASC3	60	75.424	ENSSLDG00000020308	casc3	66	75.424	Seriola_lalandi_dorsalis
ENSODEG00000017858	CASC3	85	78.114	ENSSARG00000010378	CASC3	98	78.114	Sorex_araneus
ENSODEG00000017858	CASC3	78	54.656	ENSSPAG00000023008	casc3	70	55.000	Stegastes_partitus
ENSODEG00000017858	CASC3	89	88.818	ENSSSCG00000017477	CASC3	99	87.859	Sus_scrofa
ENSODEG00000017858	CASC3	74	72.000	ENSTGUG00000002300	CASC3	99	72.000	Taeniopygia_guttata
ENSODEG00000017858	CASC3	89	48.176	ENSTNIG00000003208	casc3	91	49.396	Tetraodon_nigroviridis
ENSODEG00000017858	CASC3	66	91.981	ENSTBEG00000017459	CASC3	67	91.509	Tupaia_belangeri
ENSODEG00000017858	CASC3	86	78.974	ENSTTRG00000016896	CASC3	98	78.788	Tursiops_truncatus
ENSODEG00000017858	CASC3	100	89.250	ENSUAMG00000015116	CASC3	100	88.967	Ursus_americanus
ENSODEG00000017858	CASC3	89	89.297	ENSUMAG00000017697	CASC3	99	88.339	Ursus_maritimus
ENSODEG00000017858	CASC3	75	97.479	ENSVPAG00000000799	CASC3	75	97.479	Vicugna_pacos
ENSODEG00000017858	CASC3	100	90.227	ENSVVUG00000000997	CASC3	100	89.943	Vulpes_vulpes
ENSODEG00000017858	CASC3	89	59.812	ENSXETG00000024395	casc3	98	55.525	Xenopus_tropicalis
ENSODEG00000017858	CASC3	68	67.296	ENSXMAG00000013937	casc3	77	52.077	Xiphophorus_maculatus