EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000017957 (Gene tree)
Gene ID: 101578056
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 21724 bases
Position: chrJH651533.1:23897060-23918783
Accession: 101578056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024530	CSD	PF00313.22	3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024806	YBX3-201	1008	XM_012513796	ENSODEP00000024530	335 (aa)	XP_012369250	-

Gene Model

Click here to download ENSODEG00000017957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000017957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000017957	YBX3	81	50.542	ENSODEG00000006802	-	59	46.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000017957	YBX3	94	81.620	ENSG00000060138	YBX3	82	80.921	Homo_sapiens
ENSODEG00000017957	YBX3	94	84.953	ENSAMEG00000009393	YBX3	89	85.266	Ailuropoda_melanoleuca
ENSODEG00000017957	YBX3	84	62.456	ENSAPLG00000003147	YBX3	94	62.921	Anas_platyrhynchos
ENSODEG00000017957	YBX3	93	81.505	ENSANAG00000024492	-	94	82.432	Aotus_nancymaae
ENSODEG00000017957	YBX3	57	86.885	ENSANAG00000033366	-	77	75.472	Aotus_nancymaae
ENSODEG00000017957	YBX3	94	84.953	ENSBTAG00000009663	YBX3	84	80.878	Bos_taurus
ENSODEG00000017957	YBX3	93	80.878	ENSCJAG00000021660	-	82	80.263	Callithrix_jacchus
ENSODEG00000017957	YBX3	84	85.366	ENSCAFG00000013401	YBX3	84	86.466	Canis_familiaris
ENSODEG00000017957	YBX3	93	82.965	ENSCAFG00020006412	YBX3	80	83.775	Canis_lupus_dingo
ENSODEG00000017957	YBX3	94	84.326	ENSCHIG00000010863	YBX3	88	83.072	Capra_hircus
ENSODEG00000017957	YBX3	96	47.246	ENSTSYG00000035821	-	66	84.043	Carlito_syrichta
ENSODEG00000017957	YBX3	84	84.321	ENSTSYG00000004204	-	88	84.321	Carlito_syrichta
ENSODEG00000017957	YBX3	84	89.860	ENSCAPG00000015039	YBX3	88	89.963	Cavia_aperea
ENSODEG00000017957	YBX3	86	90.785	ENSCPOG00000011329	YBX3	94	89.062	Cavia_porcellus
ENSODEG00000017957	YBX3	93	81.191	ENSCCAG00000016469	YBX3	86	79.439	Cebus_capucinus
ENSODEG00000017957	YBX3	94	80.685	ENSCATG00000034411	YBX3	82	80.263	Cercocebus_atys
ENSODEG00000017957	YBX3	84	90.909	ENSCLAG00000016030	YBX3	94	90.909	Chinchilla_lanigera
ENSODEG00000017957	YBX3	94	81.308	ENSCSAG00000008744	YBX3	82	80.592	Chlorocebus_sabaeus
ENSODEG00000017957	YBX3	85	73.196	ENSCPBG00000014147	YBX3	76	74.359	Chrysemys_picta_bellii
ENSODEG00000017957	YBX3	87	82.373	ENSCANG00000036801	YBX3	89	83.154	Colobus_angolensis_palliatus
ENSODEG00000017957	YBX3	93	83.861	ENSCGRG00001016148	Ybx3	87	81.818	Cricetulus_griseus_chok1gshd
ENSODEG00000017957	YBX3	84	83.849	ENSCGRG00000004563	Ybx3	98	83.849	Cricetulus_griseus_crigri
ENSODEG00000017957	YBX3	94	78.769	ENSDORG00000009103	Ybx3	76	86.617	Dipodomys_ordii
ENSODEG00000017957	YBX3	83	77.193	ENSETEG00000002557	YBX3	83	81.857	Echinops_telfairi
ENSODEG00000017957	YBX3	94	80.878	ENSEASG00005014726	YBX3	86	80.878	Equus_asinus_asinus
ENSODEG00000017957	YBX3	94	83.699	ENSECAG00000013777	YBX3	86	83.699	Equus_caballus
ENSODEG00000017957	YBX3	83	82.042	ENSEEUG00000010415	YBX3	100	82.394	Erinaceus_europaeus
ENSODEG00000017957	YBX3	94	83.750	ENSFCAG00000027748	YBX3	86	83.750	Felis_catus
ENSODEG00000017957	YBX3	84	60.627	ENSFALG00000003661	YBX3	80	58.369	Ficedula_albicollis
ENSODEG00000017957	YBX3	84	84.615	ENSFDAG00000021192	YBX3	92	84.615	Fukomys_damarensis
ENSODEG00000017957	YBX3	85	55.556	ENSGALG00000031890	YBX3	78	54.362	Gallus_gallus
ENSODEG00000017957	YBX3	85	72.165	ENSGAGG00000017780	YBX3	66	74.370	Gopherus_agassizii
ENSODEG00000017957	YBX3	94	81.620	ENSGGOG00000001352	YBX3	82	80.921	Gorilla_gorilla
ENSODEG00000017957	YBX3	80	79.562	ENSHGLG00000015495	-	88	76.174	Heterocephalus_glaber_female
ENSODEG00000017957	YBX3	84	76.125	ENSHGLG00000014798	-	87	76.923	Heterocephalus_glaber_female
ENSODEG00000017957	YBX3	53	94.737	ENSHGLG00100003589	YBX3	87	60.279	Heterocephalus_glaber_male
ENSODEG00000017957	YBX3	93	80.126	ENSSTOG00000032577	-	88	78.370	Ictidomys_tridecemlineatus
ENSODEG00000017957	YBX3	84	77.622	ENSSTOG00000002108	-	88	77.622	Ictidomys_tridecemlineatus
ENSODEG00000017957	YBX3	87	68.493	ENSJJAG00000014239	Ybx3	71	92.405	Jaculus_jaculus
ENSODEG00000017957	YBX3	98	79.341	ENSLAFG00000017247	YBX3	95	80.878	Loxodonta_africana
ENSODEG00000017957	YBX3	94	80.997	ENSMFAG00000039369	YBX3	82	80.592	Macaca_fascicularis
ENSODEG00000017957	YBX3	94	80.997	ENSMMUG00000022469	YBX3	94	80.592	Macaca_mulatta
ENSODEG00000017957	YBX3	94	80.997	ENSMNEG00000045109	YBX3	82	80.592	Macaca_nemestrina
ENSODEG00000017957	YBX3	96	75.988	ENSMLEG00000033618	YBX3	79	83.566	Mandrillus_leucophaeus
ENSODEG00000017957	YBX3	84	61.189	ENSMGAG00000014224	YBX3	94	60.821	Meleagris_gallopavo
ENSODEG00000017957	YBX3	94	83.386	ENSMAUG00000012185	Ybx3	98	81.505	Mesocricetus_auratus
ENSODEG00000017957	YBX3	79	71.429	ENSMICG00000031459	-	86	56.426	Microcebus_murinus
ENSODEG00000017957	YBX3	93	85.669	ENSMICG00000038002	-	86	85.266	Microcebus_murinus
ENSODEG00000017957	YBX3	89	84.768	ENSMOCG00000016291	Ybx3	96	84.407	Microtus_ochrogaster
ENSODEG00000017957	YBX3	84	80.070	ENSMODG00000018248	YBX3	85	81.579	Monodelphis_domestica
ENSODEG00000017957	YBX3	93	83.544	MGP_CAROLIEiJ_G0028947	Ybx3	87	81.505	Mus_caroli
ENSODEG00000017957	YBX3	93	83.544	ENSMUSG00000030189	Ybx3	87	81.505	Mus_musculus
ENSODEG00000017957	YBX3	93	84.177	MGP_PahariEiJ_G0022709	Ybx3	87	82.132	Mus_pahari
ENSODEG00000017957	YBX3	93	83.861	MGP_SPRETEiJ_G0029994	Ybx3	87	81.818	Mus_spretus
ENSODEG00000017957	YBX3	94	71.341	ENSMPUG00000011810	YBX3	86	70.427	Mustela_putorius_furo
ENSODEG00000017957	YBX3	78	82.528	ENSMLUG00000007476	YBX3	94	81.746	Myotis_lucifugus
ENSODEG00000017957	YBX3	93	79.180	ENSNGAG00000000710	Ybx3	100	58.044	Nannospalax_galili
ENSODEG00000017957	YBX3	94	81.073	ENSNLEG00000034844	YBX3	91	79.495	Nomascus_leucogenys
ENSODEG00000017957	YBX3	50	68.208	ENSMEUG00000002507	-	81	68.208	Notamacropus_eugenii
ENSODEG00000017957	YBX3	87	80.612	ENSOCUG00000001889	YBX3	86	80.339	Oryctolagus_cuniculus
ENSODEG00000017957	YBX3	93	83.591	ENSOGAG00000013245	YBX3	82	84.790	Otolemur_garnettii
ENSODEG00000017957	YBX3	87	77.441	ENSOARG00000020919	YBX3	94	77.857	Ovis_aries
ENSODEG00000017957	YBX3	86	82.935	ENSPPAG00000039068	YBX3	78	83.871	Pan_paniscus
ENSODEG00000017957	YBX3	94	84.062	ENSPPRG00000005859	YBX3	86	84.062	Panthera_pardus
ENSODEG00000017957	YBX3	84	85.915	ENSPTIG00000005322	YBX3	81	85.664	Panthera_tigris_altaica
ENSODEG00000017957	YBX3	94	81.620	ENSPTRG00000004681	YBX3	81	80.921	Pan_troglodytes
ENSODEG00000017957	YBX3	94	80.685	ENSPANG00000010280	YBX3	82	80.263	Papio_anubis
ENSODEG00000017957	YBX3	62	88.462	ENSPSIG00000009247	YBX3	81	87.209	Pelodiscus_sinensis
ENSODEG00000017957	YBX3	67	83.051	ENSPEMG00000010391	-	74	88.000	Peromyscus_maniculatus_bairdii
ENSODEG00000017957	YBX3	94	83.386	ENSPEMG00000012132	-	99	81.505	Peromyscus_maniculatus_bairdii
ENSODEG00000017957	YBX3	76	72.587	ENSPCIG00000029949	YBX3	93	75.314	Phascolarctos_cinereus
ENSODEG00000017957	YBX3	94	81.308	ENSPPYG00000004279	YBX3	82	80.592	Pongo_abelii
ENSODEG00000017957	YBX3	63	86.047	ENSPCAG00000001397	YBX3	81	85.043	Procavia_capensis
ENSODEG00000017957	YBX3	53	79.781	ENSPCOG00000011663	YBX3	81	78.947	Propithecus_coquereli
ENSODEG00000017957	YBX3	93	71.924	ENSPVAG00000006740	YBX3	62	86.325	Pteropus_vampyrus
ENSODEG00000017957	YBX3	93	84.177	ENSRNOG00000005480	Ybx3	87	82.132	Rattus_norvegicus
ENSODEG00000017957	YBX3	86	82.594	ENSRBIG00000039208	YBX3	82	80.592	Rhinopithecus_bieti
ENSODEG00000017957	YBX3	94	81.308	ENSRROG00000029638	YBX3	82	80.263	Rhinopithecus_roxellana
ENSODEG00000017957	YBX3	97	74.242	ENSSBOG00000030573	YBX3	83	84.266	Saimiri_boliviensis_boliviensis
ENSODEG00000017957	YBX3	84	74.570	ENSSHAG00000003262	YBX3	91	75.000	Sarcophilus_harrisii
ENSODEG00000017957	YBX3	94	80.805	ENSSSCG00000000633	YBX3	85	83.591	Sus_scrofa
ENSODEG00000017957	YBX3	84	61.538	ENSTGUG00000012047	YBX3	94	61.194	Taeniopygia_guttata
ENSODEG00000017957	YBX3	96	78.287	ENSTBEG00000012570	YBX3	81	83.333	Tupaia_belangeri
ENSODEG00000017957	YBX3	77	76.316	ENSTTRG00000008045	YBX3	100	76.316	Tursiops_truncatus
ENSODEG00000017957	YBX3	81	82.310	ENSUAMG00000016662	YBX3	100	82.310	Ursus_americanus
ENSODEG00000017957	YBX3	84	85.915	ENSUMAG00000016118	YBX3	89	86.989	Ursus_maritimus
ENSODEG00000017957	YBX3	83	66.197	ENSVPAG00000000876	YBX3	100	66.197	Vicugna_pacos
ENSODEG00000017957	YBX3	81	81.588	ENSVVUG00000004956	YBX3	100	81.588	Vulpes_vulpes
ENSODEG00000017957	YBX3	84	57.627	ENSXETG00000016239	ybx3	75	54.656	Xenopus_tropicalis