EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018002 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 2688 bases
Position: chrJH651613.1:9888591-9891278
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024595	DND1_DSRM	PF14709.7	1e-27	1	1
ENSODEP00000024595	RRM_1	PF00076.22	1.3e-34	1	3
ENSODEP00000024595	RRM_1	PF00076.22	1.3e-34	2	3
ENSODEP00000024595	RRM_1	PF00076.22	1.3e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000024871	-	1545	-	ENSODEP00000024595	514 (aa)	-	-

Gene Model

Click here to download ENSODEG00000018002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018002	-	59	72.607	ENSODEG00000004873	RBM47	53	70.159
ENSODEG00000018002	-	57	51.864	ENSODEG00000004900	-	50	51.186
ENSODEG00000018002	-	58	54.000	ENSODEG00000008768	SYNCRIP	53	53.333
ENSODEG00000018002	-	93	92.469	ENSODEG00000000735	-	99	92.469
ENSODEG00000018002	-	58	39.527	ENSODEG00000005445	-	56	39.527
ENSODEG00000018002	-	53	30.286	ENSODEG00000009409	TIA1	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018002	-	93	94.351	ENSG00000151962	RBM46	100	95.489	Homo_sapiens
ENSODEG00000018002	-	88	65.944	ENSAPOG00000009209	rbm46	90	65.944	Acanthochromis_polyacanthus
ENSODEG00000018002	-	96	88.760	ENSAMEG00000013290	RBM46	97	88.760	Ailuropoda_melanoleuca
ENSODEG00000018002	-	91	59.034	ENSACIG00000014500	rbm46	91	59.244	Amphilophus_citrinellus
ENSODEG00000018002	-	86	66.292	ENSAOCG00000001892	-	86	66.292	Amphiprion_ocellaris
ENSODEG00000018002	-	86	66.292	ENSAPEG00000017762	rbm46	96	66.292	Amphiprion_percula
ENSODEG00000018002	-	88	65.487	ENSATEG00000010775	rbm46	93	62.118	Anabas_testudineus
ENSODEG00000018002	-	91	85.011	ENSAPLG00000005116	RBM46	100	85.011	Anas_platyrhynchos
ENSODEG00000018002	-	96	81.202	ENSACAG00000015599	RBM46	97	81.202	Anolis_carolinensis
ENSODEG00000018002	-	93	93.305	ENSANAG00000029193	RBM46	99	93.576	Aotus_nancymaae
ENSODEG00000018002	-	88	64.069	ENSACLG00000016153	rbm46	81	64.009	Astatotilapia_calliptera
ENSODEG00000018002	-	93	61.663	ENSAMXG00000020892	-	92	61.663	Astyanax_mexicanus
ENSODEG00000018002	-	88	66.962	ENSAMXG00000009397	rbm46	98	67.184	Astyanax_mexicanus
ENSODEG00000018002	-	93	94.142	ENSBTAG00000001696	RBM46	99	94.142	Bos_taurus
ENSODEG00000018002	-	93	93.305	ENSCJAG00000001768	RBM46	99	93.576	Callithrix_jacchus
ENSODEG00000018002	-	93	94.770	ENSCAFG00000008473	RBM46	99	94.770	Canis_familiaris
ENSODEG00000018002	-	91	94.658	ENSCAFG00020002468	RBM46	95	94.658	Canis_lupus_dingo
ENSODEG00000018002	-	93	93.933	ENSCHIG00000000502	RBM46	99	93.933	Capra_hircus
ENSODEG00000018002	-	93	94.351	ENSTSYG00000010435	RBM46	99	94.647	Carlito_syrichta
ENSODEG00000018002	-	72	92.412	ENSCAPG00000011841	-	99	92.412	Cavia_aperea
ENSODEG00000018002	-	93	93.096	ENSCAPG00000011928	-	99	93.096	Cavia_aperea
ENSODEG00000018002	-	95	91.515	ENSCPOG00000020396	-	99	90.982	Cavia_porcellus
ENSODEG00000018002	-	93	93.096	ENSCPOG00000010284	-	99	93.148	Cavia_porcellus
ENSODEG00000018002	-	96	83.493	ENSCPOG00000019272	-	97	83.493	Cavia_porcellus
ENSODEG00000018002	-	93	94.351	ENSCCAG00000027619	-	99	94.351	Cebus_capucinus
ENSODEG00000018002	-	97	75.581	ENSCCAG00000001323	-	99	79.158	Cebus_capucinus
ENSODEG00000018002	-	93	94.142	ENSCATG00000040148	RBM46	99	94.142	Cercocebus_atys
ENSODEG00000018002	-	93	94.142	ENSCLAG00000005846	-	99	94.142	Chinchilla_lanigera
ENSODEG00000018002	-	96	91.585	ENSCLAG00000011886	-	99	91.585	Chinchilla_lanigera
ENSODEG00000018002	-	96	87.984	ENSCSAG00000003263	RBM46	97	87.984	Chlorocebus_sabaeus
ENSODEG00000018002	-	96	87.597	ENSCHOG00000003429	RBM46	97	88.178	Choloepus_hoffmanni
ENSODEG00000018002	-	87	90.337	ENSCPBG00000009314	RBM46	97	90.337	Chrysemys_picta_bellii
ENSODEG00000018002	-	93	93.724	ENSCANG00000039065	RBM46	99	93.790	Colobus_angolensis_palliatus
ENSODEG00000018002	-	93	94.142	ENSCGRG00001016714	Rbm46	99	94.218	Cricetulus_griseus_chok1gshd
ENSODEG00000018002	-	93	94.142	ENSCGRG00000011738	Rbm46	99	94.218	Cricetulus_griseus_crigri
ENSODEG00000018002	-	87	58.837	ENSCSEG00000005530	rbm46	96	58.837	Cynoglossus_semilaevis
ENSODEG00000018002	-	91	62.340	ENSCVAG00000021013	rbm46	96	62.340	Cyprinodon_variegatus
ENSODEG00000018002	-	88	67.538	ENSDARG00000079452	rbm46	88	67.965	Danio_rerio
ENSODEG00000018002	-	96	88.566	ENSDNOG00000016195	RBM46	97	88.566	Dasypus_novemcinctus
ENSODEG00000018002	-	93	94.351	ENSDORG00000006405	Rbm46	99	94.433	Dipodomys_ordii
ENSODEG00000018002	-	96	86.047	ENSETEG00000014902	RBM46	97	86.047	Echinops_telfairi
ENSODEG00000018002	-	96	87.209	ENSEASG00005015821	RBM46	97	87.209	Equus_asinus_asinus
ENSODEG00000018002	-	93	93.305	ENSECAG00000007649	RBM46	99	93.305	Equus_caballus
ENSODEG00000018002	-	96	84.690	ENSEEUG00000011824	RBM46	97	84.690	Erinaceus_europaeus
ENSODEG00000018002	-	74	69.974	ENSELUG00000008166	rbm46	98	69.974	Esox_lucius
ENSODEG00000018002	-	93	94.351	ENSFCAG00000029812	RBM46	99	94.433	Felis_catus
ENSODEG00000018002	-	93	81.723	ENSFALG00000013157	RBM46	94	81.723	Ficedula_albicollis
ENSODEG00000018002	-	96	85.078	ENSFDAG00000019281	-	97	85.078	Fukomys_damarensis
ENSODEG00000018002	-	97	89.357	ENSFDAG00000006445	-	97	89.357	Fukomys_damarensis
ENSODEG00000018002	-	82	59.102	ENSFHEG00000013257	rbm46	93	59.382	Fundulus_heteroclitus
ENSODEG00000018002	-	92	77.215	ENSGALG00000009278	RBM46	100	77.215	Gallus_gallus
ENSODEG00000018002	-	56	80.139	ENSGAFG00000020245	rbm46	67	80.139	Gambusia_affinis
ENSODEG00000018002	-	91	90.385	ENSGAGG00000002019	RBM46	89	90.385	Gopherus_agassizii
ENSODEG00000018002	-	93	94.561	ENSGGOG00000001876	RBM46	99	94.561	Gorilla_gorilla
ENSODEG00000018002	-	87	61.435	ENSHBUG00000009609	rbm46	91	66.114	Haplochromis_burtoni
ENSODEG00000018002	-	92	77.754	ENSHGLG00000002940	-	89	77.754	Heterocephalus_glaber_female
ENSODEG00000018002	-	96	74.851	ENSHGLG00000010742	-	99	74.257	Heterocephalus_glaber_female
ENSODEG00000018002	-	93	85.565	ENSHGLG00000002463	-	99	92.379	Heterocephalus_glaber_female
ENSODEG00000018002	-	93	92.050	ENSHGLG00100012752	-	99	92.077	Heterocephalus_glaber_male
ENSODEG00000018002	-	96	74.851	ENSHGLG00100004977	-	99	74.257	Heterocephalus_glaber_male
ENSODEG00000018002	-	92	74.419	ENSHGLG00100018987	-	89	74.419	Heterocephalus_glaber_male
ENSODEG00000018002	-	89	50.108	ENSHCOG00000012998	rbm46	88	51.131	Hippocampus_comes
ENSODEG00000018002	-	90	66.388	ENSIPUG00000024038	rbm46	96	66.042	Ictalurus_punctatus
ENSODEG00000018002	-	93	94.979	ENSSTOG00000007918	RBM46	99	94.979	Ictidomys_tridecemlineatus
ENSODEG00000018002	-	93	92.259	ENSJJAG00000003902	Rbm46	99	92.259	Jaculus_jaculus
ENSODEG00000018002	-	90	63.425	ENSKMAG00000015127	rbm46	88	62.994	Kryptolebias_marmoratus
ENSODEG00000018002	-	96	80.077	ENSLACG00000002062	RBM46	97	80.077	Latimeria_chalumnae
ENSODEG00000018002	-	93	71.875	ENSLOCG00000008298	rbm46	99	73.593	Lepisosteus_oculatus
ENSODEG00000018002	-	91	94.433	ENSLAFG00000015448	RBM46	99	94.433	Loxodonta_africana
ENSODEG00000018002	-	93	94.561	ENSMFAG00000043485	RBM46	99	94.561	Macaca_fascicularis
ENSODEG00000018002	-	93	94.561	ENSMMUG00000021147	RBM46	99	94.561	Macaca_mulatta
ENSODEG00000018002	-	93	94.561	ENSMNEG00000002787	RBM46	99	94.561	Macaca_nemestrina
ENSODEG00000018002	-	93	93.933	ENSMLEG00000029756	RBM46	99	93.933	Mandrillus_leucophaeus
ENSODEG00000018002	-	87	66.225	ENSMAMG00000009093	rbm46	88	66.225	Mastacembelus_armatus
ENSODEG00000018002	-	91	62.876	ENSMZEG00005027849	rbm46	95	62.876	Maylandia_zebra
ENSODEG00000018002	-	91	78.252	ENSMGAG00000001457	RBM46	99	78.252	Meleagris_gallopavo
ENSODEG00000018002	-	93	94.142	ENSMAUG00000009911	Rbm46	99	94.218	Mesocricetus_auratus
ENSODEG00000018002	-	93	94.142	ENSMICG00000042747	RBM46	99	94.142	Microcebus_murinus
ENSODEG00000018002	-	93	94.770	ENSMOCG00000001188	Rbm46	99	94.861	Microtus_ochrogaster
ENSODEG00000018002	-	88	63.974	ENSMMOG00000011214	rbm46	93	60.896	Mola_mola
ENSODEG00000018002	-	91	93.617	ENSMODG00000001302	RBM46	81	93.617	Monodelphis_domestica
ENSODEG00000018002	-	86	63.431	ENSMALG00000006185	rbm46	93	63.514	Monopterus_albus
ENSODEG00000018002	-	93	94.351	MGP_CAROLIEiJ_G0025101	Rbm46	99	94.433	Mus_caroli
ENSODEG00000018002	-	93	93.933	ENSMUSG00000033882	Rbm46	99	94.004	Mus_musculus
ENSODEG00000018002	-	93	94.561	MGP_PahariEiJ_G0026544	Rbm46	99	94.647	Mus_pahari
ENSODEG00000018002	-	93	93.724	MGP_SPRETEiJ_G0026043	Rbm46	99	93.790	Mus_spretus
ENSODEG00000018002	-	93	94.979	ENSMPUG00000005670	RBM46	99	94.979	Mustela_putorius_furo
ENSODEG00000018002	-	96	88.008	ENSMLUG00000003221	RBM46	97	88.008	Myotis_lucifugus
ENSODEG00000018002	-	93	93.724	ENSNGAG00000004231	Rbm46	99	93.790	Nannospalax_galili
ENSODEG00000018002	-	87	65.247	ENSNBRG00000000273	rbm46	84	65.101	Neolamprologus_brichardi
ENSODEG00000018002	-	93	94.351	ENSNLEG00000006184	RBM46	99	94.351	Nomascus_leucogenys
ENSODEG00000018002	-	81	94.471	ENSMEUG00000013328	RBM46	99	94.390	Notamacropus_eugenii
ENSODEG00000018002	-	55	94.700	ENSOPRG00000007136	RBM46	100	94.700	Ochotona_princeps
ENSODEG00000018002	-	87	65.111	ENSONIG00000014096	rbm46	96	65.111	Oreochromis_niloticus
ENSODEG00000018002	-	94	84.521	ENSOANG00000002141	RBM46	97	86.837	Ornithorhynchus_anatinus
ENSODEG00000018002	-	96	88.760	ENSOCUG00000017859	RBM46	97	88.760	Oryctolagus_cuniculus
ENSODEG00000018002	-	88	62.771	ENSORLG00000002429	rbm46	88	63.311	Oryzias_latipes
ENSODEG00000018002	-	88	62.582	ENSORLG00020022154	rbm46	81	63.399	Oryzias_latipes_hni
ENSODEG00000018002	-	89	62.690	ENSORLG00015020234	rbm46	91	64.176	Oryzias_latipes_hsok
ENSODEG00000018002	-	87	62.084	ENSOMEG00000022580	rbm46	86	62.084	Oryzias_melastigma
ENSODEG00000018002	-	96	88.760	ENSOGAG00000005647	RBM46	97	88.760	Otolemur_garnettii
ENSODEG00000018002	-	93	94.142	ENSOARG00000016406	RBM46	99	94.142	Ovis_aries
ENSODEG00000018002	-	93	94.561	ENSPPAG00000043236	RBM46	99	94.561	Pan_paniscus
ENSODEG00000018002	-	93	94.142	ENSPPRG00000009416	RBM46	99	94.218	Panthera_pardus
ENSODEG00000018002	-	93	94.142	ENSPTIG00000017449	RBM46	99	94.218	Panthera_tigris_altaica
ENSODEG00000018002	-	93	94.561	ENSPTRG00000016538	RBM46	99	94.561	Pan_troglodytes
ENSODEG00000018002	-	93	94.561	ENSPANG00000004186	RBM46	99	94.561	Papio_anubis
ENSODEG00000018002	-	88	71.302	ENSPKIG00000015334	rbm46	79	71.302	Paramormyrops_kingsleyae
ENSODEG00000018002	-	95	88.115	ENSPSIG00000006429	RBM46	99	88.115	Pelodiscus_sinensis
ENSODEG00000018002	-	87	81.648	ENSPMGG00000019872	rbm46	92	81.343	Periophthalmus_magnuspinnatus
ENSODEG00000018002	-	93	94.142	ENSPEMG00000013899	Rbm46	99	94.218	Peromyscus_maniculatus_bairdii
ENSODEG00000018002	-	93	93.933	ENSPCIG00000029626	RBM46	99	93.933	Phascolarctos_cinereus
ENSODEG00000018002	-	77	78.644	ENSPFOG00000001079	rbm46	73	78.644	Poecilia_formosa
ENSODEG00000018002	-	92	62.762	ENSPLAG00000004541	rbm46	83	62.971	Poecilia_latipinna
ENSODEG00000018002	-	92	62.762	ENSPMEG00000015724	rbm46	92	64.602	Poecilia_mexicana
ENSODEG00000018002	-	92	62.762	ENSPREG00000014464	rbm46	95	65.570	Poecilia_reticulata
ENSODEG00000018002	-	96	88.178	ENSPPYG00000015144	RBM46	97	88.178	Pongo_abelii
ENSODEG00000018002	-	95	84.774	ENSPCAG00000003110	RBM46	91	84.774	Procavia_capensis
ENSODEG00000018002	-	93	93.724	ENSPCOG00000024347	RBM46	99	93.724	Propithecus_coquereli
ENSODEG00000018002	-	96	88.372	ENSPVAG00000008376	RBM46	97	88.372	Pteropus_vampyrus
ENSODEG00000018002	-	87	68.845	ENSPNAG00000025312	rbm46	88	68.547	Pygocentrus_nattereri
ENSODEG00000018002	-	96	88.566	ENSRNOG00000025823	Rbm46	97	88.566	Rattus_norvegicus
ENSODEG00000018002	-	93	93.515	ENSRBIG00000032583	RBM46	99	93.576	Rhinopithecus_bieti
ENSODEG00000018002	-	93	93.724	ENSRROG00000044288	RBM46	99	93.790	Rhinopithecus_roxellana
ENSODEG00000018002	-	93	94.142	ENSSBOG00000033028	RBM46	99	94.142	Saimiri_boliviensis_boliviensis
ENSODEG00000018002	-	96	87.984	ENSSHAG00000012596	RBM46	97	87.984	Sarcophilus_harrisii
ENSODEG00000018002	-	89	71.522	ENSSFOG00015000087	rbm46	87	70.870	Scleropages_formosus
ENSODEG00000018002	-	89	61.758	ENSSMAG00000017042	rbm46	95	61.758	Scophthalmus_maximus
ENSODEG00000018002	-	88	66.740	ENSSDUG00000020645	rbm46	86	68.000	Seriola_dumerili
ENSODEG00000018002	-	96	88.372	ENSSARG00000006520	RBM46	97	88.372	Sorex_araneus
ENSODEG00000018002	-	97	85.972	ENSSPUG00000012525	-	92	85.972	Sphenodon_punctatus
ENSODEG00000018002	-	93	87.395	ENSSPUG00000004773	-	99	87.212	Sphenodon_punctatus
ENSODEG00000018002	-	88	63.053	ENSSPAG00000013697	rbm46	94	63.053	Stegastes_partitus
ENSODEG00000018002	-	93	94.561	ENSSSCG00000008994	RBM46	99	94.561	Sus_scrofa
ENSODEG00000018002	-	91	82.227	ENSTGUG00000005307	RBM46	100	82.227	Taeniopygia_guttata
ENSODEG00000018002	-	87	63.839	ENSTRUG00000004237	rbm46	89	63.982	Takifugu_rubripes
ENSODEG00000018002	-	90	60.381	ENSTNIG00000008714	rbm46	87	60.381	Tetraodon_nigroviridis
ENSODEG00000018002	-	95	88.889	ENSTBEG00000013949	RBM46	91	88.889	Tupaia_belangeri
ENSODEG00000018002	-	96	86.240	ENSTTRG00000001239	RBM46	97	86.240	Tursiops_truncatus
ENSODEG00000018002	-	93	94.979	ENSUAMG00000026593	RBM46	99	94.979	Ursus_americanus
ENSODEG00000018002	-	93	94.770	ENSUMAG00000016442	RBM46	99	94.770	Ursus_maritimus
ENSODEG00000018002	-	93	94.979	ENSVVUG00000024957	RBM46	99	94.979	Vulpes_vulpes
ENSODEG00000018002	-	91	77.253	ENSXETG00000022412	-	95	72.941	Xenopus_tropicalis
ENSODEG00000018002	-	91	56.900	ENSXETG00000032344	-	87	56.688	Xenopus_tropicalis
ENSODEG00000018002	-	71	72.452	ENSXETG00000032067	-	98	71.625	Xenopus_tropicalis
ENSODEG00000018002	-	87	65.142	ENSXMAG00000008237	rbm46	90	64.565	Xiphophorus_maculatus