EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000018111 (Gene tree)
Gene ID: 101591429
Gene Symbol: GNL1
Alias: HSR1
Full Name: G protein nucleolar 1 (putative)
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 7586 bases
Position: chrJH651520.1:33773258-33780843
Accession: 101591429
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024750	MMR_HSR1	PF01926.23	2.3e-13	1	1
ENSODEP00000024749	MMR_HSR1	PF01926.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025027	GNL1-202	1770	-	ENSODEP00000024750	589 (aa)	-	-
ENSODET00000025026	GNL1-201	1947	XM_004624347	ENSODEP00000024749	609 (aa)	XP_004624404	UPI0003337192

Gene Model

Click here to download ENSODEG00000018111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018111	GNL1	100	90.969	ENSG00000204590	GNL1	100	90.805	Homo_sapiens
ENSODEG00000018111	GNL1	95	58.206	ENSAPOG00000006315	gnl1	99	55.821	Acanthochromis_polyacanthus
ENSODEG00000018111	GNL1	100	91.297	ENSAMEG00000013421	GNL1	100	91.297	Ailuropoda_melanoleuca
ENSODEG00000018111	GNL1	95	57.313	ENSACIG00000013539	gnl1	99	56.109	Amphilophus_citrinellus
ENSODEG00000018111	GNL1	95	57.530	ENSAOCG00000008320	gnl1	99	55.662	Amphiprion_ocellaris
ENSODEG00000018111	GNL1	95	58.037	ENSAPEG00000011154	gnl1	99	55.662	Amphiprion_percula
ENSODEG00000018111	GNL1	90	59.964	ENSATEG00000020647	gnl1	99	56.160	Anabas_testudineus
ENSODEG00000018111	GNL1	100	62.222	ENSACAG00000010395	GNL1	100	63.810	Anolis_carolinensis
ENSODEG00000018111	GNL1	100	91.489	ENSANAG00000028106	GNL1	100	91.326	Aotus_nancymaae
ENSODEG00000018111	GNL1	95	57.823	ENSACLG00000025394	gnl1	99	55.929	Astatotilapia_calliptera
ENSODEG00000018111	GNL1	91	56.964	ENSAMXG00000016080	gnl1	99	52.443	Astyanax_mexicanus
ENSODEG00000018111	GNL1	100	91.461	ENSBTAG00000025516	GNL1	100	91.297	Bos_taurus
ENSODEG00000018111	GNL1	100	90.671	ENSCJAG00000019996	GNL1	100	90.671	Callithrix_jacchus
ENSODEG00000018111	GNL1	100	90.640	ENSCAFG00000000396	GNL1	100	90.476	Canis_familiaris
ENSODEG00000018111	GNL1	100	90.640	ENSCAFG00020017556	GNL1	100	90.476	Canis_lupus_dingo
ENSODEG00000018111	GNL1	100	90.640	ENSCHIG00000019763	GNL1	100	91.133	Capra_hircus
ENSODEG00000018111	GNL1	100	91.626	ENSTSYG00000000164	GNL1	100	91.461	Carlito_syrichta
ENSODEG00000018111	GNL1	90	92.293	ENSCAPG00000006662	GNL1	98	92.551	Cavia_aperea
ENSODEG00000018111	GNL1	100	92.611	ENSCPOG00000001944	GNL1	100	92.611	Cavia_porcellus
ENSODEG00000018111	GNL1	100	91.626	ENSCCAG00000037467	GNL1	100	91.461	Cebus_capucinus
ENSODEG00000018111	GNL1	100	91.297	ENSCATG00000045232	GNL1	100	91.297	Cercocebus_atys
ENSODEG00000018111	GNL1	96	94.007	ENSCLAG00000012557	GNL1	100	94.521	Chinchilla_lanigera
ENSODEG00000018111	GNL1	100	91.133	ENSCSAG00000008202	GNL1	100	91.133	Chlorocebus_sabaeus
ENSODEG00000018111	GNL1	87	90.476	ENSCHOG00000010907	GNL1	87	90.476	Choloepus_hoffmanni
ENSODEG00000018111	GNL1	92	66.549	ENSCPBG00000018821	GNL1	100	64.603	Chrysemys_picta_bellii
ENSODEG00000018111	GNL1	89	50.000	ENSCING00000014499	-	100	49.631	Ciona_intestinalis
ENSODEG00000018111	GNL1	89	49.369	ENSCSAVG00000007354	-	90	49.621	Ciona_savignyi
ENSODEG00000018111	GNL1	100	91.133	ENSCANG00000012933	GNL1	100	91.133	Colobus_angolensis_palliatus
ENSODEG00000018111	GNL1	100	90.805	ENSCGRG00001004986	Gnl1	100	90.148	Cricetulus_griseus_chok1gshd
ENSODEG00000018111	GNL1	96	90.411	ENSCGRG00000014309	Gnl1	100	89.726	Cricetulus_griseus_crigri
ENSODEG00000018111	GNL1	91	51.323	ENSCSEG00000019714	gnl1	99	48.237	Cynoglossus_semilaevis
ENSODEG00000018111	GNL1	92	57.368	ENSCVAG00000022650	gnl1	99	54.313	Cyprinodon_variegatus
ENSODEG00000018111	GNL1	90	59.173	ENSDARG00000061789	gnl1	99	57.027	Danio_rerio
ENSODEG00000018111	GNL1	100	72.934	ENSDNOG00000041571	GNL1	100	73.582	Dasypus_novemcinctus
ENSODEG00000018111	GNL1	99	41.186	FBgn0032882	Ns4	82	43.400	Drosophila_melanogaster
ENSODEG00000018111	GNL1	53	87.898	ENSETEG00000005518	-	100	86.943	Echinops_telfairi
ENSODEG00000018111	GNL1	59	53.067	ENSEBUG00000009531	-	87	55.758	Eptatretus_burgeri
ENSODEG00000018111	GNL1	100	91.297	ENSEASG00005018610	GNL1	100	91.133	Equus_asinus_asinus
ENSODEG00000018111	GNL1	100	91.461	ENSECAG00000023081	GNL1	100	91.297	Equus_caballus
ENSODEG00000018111	GNL1	90	59.894	ENSELUG00000006281	gnl1	99	56.515	Esox_lucius
ENSODEG00000018111	GNL1	100	91.461	ENSFCAG00000007676	GNL1	100	91.297	Felis_catus
ENSODEG00000018111	GNL1	90	92.830	ENSFDAG00000000584	GNL1	100	92.250	Fukomys_damarensis
ENSODEG00000018111	GNL1	90	57.961	ENSFHEG00000011353	gnl1	99	54.153	Fundulus_heteroclitus
ENSODEG00000018111	GNL1	90	58.423	ENSGMOG00000015224	gnl1	100	54.766	Gadus_morhua
ENSODEG00000018111	GNL1	90	57.914	ENSGAFG00000014611	gnl1	99	52.674	Gambusia_affinis
ENSODEG00000018111	GNL1	92	58.014	ENSGACG00000009765	gnl1	100	54.444	Gasterosteus_aculeatus
ENSODEG00000018111	GNL1	100	91.133	ENSGGOG00000014590	GNL1	100	90.969	Gorilla_gorilla
ENSODEG00000018111	GNL1	95	57.823	ENSHBUG00000016745	gnl1	99	55.929	Haplochromis_burtoni
ENSODEG00000018111	GNL1	100	92.484	ENSHGLG00000017193	GNL1	100	91.667	Heterocephalus_glaber_female
ENSODEG00000018111	GNL1	90	89.454	ENSHGLG00100009994	GNL1	100	90.755	Heterocephalus_glaber_male
ENSODEG00000018111	GNL1	100	57.280	ENSHCOG00000012493	gnl1	99	56.731	Hippocampus_comes
ENSODEG00000018111	GNL1	90	59.313	ENSIPUG00000004850	gnl1	99	57.767	Ictalurus_punctatus
ENSODEG00000018111	GNL1	100	90.969	ENSSTOG00000011822	GNL1	100	90.805	Ictidomys_tridecemlineatus
ENSODEG00000018111	GNL1	100	89.819	ENSJJAG00000010831	-	100	89.327	Jaculus_jaculus
ENSODEG00000018111	GNL1	90	58.633	ENSKMAG00000009059	gnl1	99	55.200	Kryptolebias_marmoratus
ENSODEG00000018111	GNL1	90	59.066	ENSLBEG00000011038	gnl1	99	55.751	Labrus_bergylta
ENSODEG00000018111	GNL1	100	64.715	ENSLACG00000001713	GNL1	100	64.437	Latimeria_chalumnae
ENSODEG00000018111	GNL1	100	91.133	ENSLAFG00000030406	GNL1	100	90.640	Loxodonta_africana
ENSODEG00000018111	GNL1	100	91.297	ENSMFAG00000001167	GNL1	100	91.297	Macaca_fascicularis
ENSODEG00000018111	GNL1	100	91.297	ENSMMUG00000020077	GNL1	100	91.297	Macaca_mulatta
ENSODEG00000018111	GNL1	100	91.297	ENSMNEG00000031618	GNL1	100	91.297	Macaca_nemestrina
ENSODEG00000018111	GNL1	100	91.297	ENSMLEG00000030252	GNL1	100	91.297	Mandrillus_leucophaeus
ENSODEG00000018111	GNL1	95	58.545	ENSMAMG00000003554	gnl1	99	56.459	Mastacembelus_armatus
ENSODEG00000018111	GNL1	95	57.823	ENSMZEG00005018216	gnl1	99	55.929	Maylandia_zebra
ENSODEG00000018111	GNL1	100	88.033	ENSMAUG00000015596	Gnl1	100	87.049	Mesocricetus_auratus
ENSODEG00000018111	GNL1	100	90.476	ENSMICG00000014708	GNL1	100	90.969	Microcebus_murinus
ENSODEG00000018111	GNL1	100	90.640	ENSMOCG00000020934	Gnl1	100	90.476	Microtus_ochrogaster
ENSODEG00000018111	GNL1	95	55.857	ENSMMOG00000015833	gnl1	99	54.254	Mola_mola
ENSODEG00000018111	GNL1	100	80.460	ENSMODG00000015964	GNL1	95	80.460	Monodelphis_domestica
ENSODEG00000018111	GNL1	92	58.464	ENSMALG00000022523	gnl1	99	55.929	Monopterus_albus
ENSODEG00000018111	GNL1	100	88.177	MGP_CAROLIEiJ_G0021547	Gnl1	100	90.148	Mus_caroli
ENSODEG00000018111	GNL1	100	90.148	ENSMUSG00000024429	Gnl1	100	90.148	Mus_musculus
ENSODEG00000018111	GNL1	100	90.312	MGP_PahariEiJ_G0020539	Gnl1	100	90.312	Mus_pahari
ENSODEG00000018111	GNL1	100	89.819	MGP_SPRETEiJ_G0022452	Gnl1	100	89.819	Mus_spretus
ENSODEG00000018111	GNL1	96	90.598	ENSMPUG00000011828	GNL1	79	90.427	Mustela_putorius_furo
ENSODEG00000018111	GNL1	96	88.756	ENSMLUG00000008722	GNL1	97	86.712	Myotis_lucifugus
ENSODEG00000018111	GNL1	100	90.312	ENSNGAG00000000745	Gnl1	100	89.655	Nannospalax_galili
ENSODEG00000018111	GNL1	95	57.653	ENSNBRG00000020813	gnl1	99	56.109	Neolamprologus_brichardi
ENSODEG00000018111	GNL1	91	88.628	ENSNLEG00000005058	GNL1	79	87.906	Nomascus_leucogenys
ENSODEG00000018111	GNL1	90	88.679	ENSOPRG00000000007	GNL1	100	89.225	Ochotona_princeps
ENSODEG00000018111	GNL1	95	57.823	ENSONIG00000013044	gnl1	99	55.929	Oreochromis_niloticus
ENSODEG00000018111	GNL1	100	89.984	ENSOCUG00000002110	GNL1	100	89.819	Oryctolagus_cuniculus
ENSODEG00000018111	GNL1	90	57.527	ENSORLG00000012862	gnl1	95	56.061	Oryzias_latipes
ENSODEG00000018111	GNL1	90	57.885	ENSORLG00020003923	gnl1	95	56.229	Oryzias_latipes_hni
ENSODEG00000018111	GNL1	90	57.527	ENSORLG00015009552	gnl1	95	55.892	Oryzias_latipes_hsok
ENSODEG00000018111	GNL1	96	56.176	ENSOMEG00000014409	gnl1	99	54.153	Oryzias_melastigma
ENSODEG00000018111	GNL1	98	87.102	ENSOGAG00000024106	-	100	86.097	Otolemur_garnettii
ENSODEG00000018111	GNL1	100	91.461	ENSOGAG00000004428	-	100	91.297	Otolemur_garnettii
ENSODEG00000018111	GNL1	100	88.799	ENSOARG00000012966	GNL1	100	89.610	Ovis_aries
ENSODEG00000018111	GNL1	100	91.297	ENSPPAG00000044009	GNL1	100	91.133	Pan_paniscus
ENSODEG00000018111	GNL1	100	91.461	ENSPPRG00000007039	GNL1	100	91.297	Panthera_pardus
ENSODEG00000018111	GNL1	100	91.297	ENSPTIG00000011307	GNL1	100	91.133	Panthera_tigris_altaica
ENSODEG00000018111	GNL1	99	90.594	ENSPTRG00000017928	GNL1	99	90.759	Pan_troglodytes
ENSODEG00000018111	GNL1	100	91.297	ENSPANG00000020097	GNL1	100	91.297	Papio_anubis
ENSODEG00000018111	GNL1	90	59.199	ENSPKIG00000002200	gnl1	99	56.564	Paramormyrops_kingsleyae
ENSODEG00000018111	GNL1	94	54.685	ENSPSIG00000008441	GNL1	98	54.688	Pelodiscus_sinensis
ENSODEG00000018111	GNL1	90	59.173	ENSPMGG00000007259	gnl1	99	57.536	Periophthalmus_magnuspinnatus
ENSODEG00000018111	GNL1	97	88.814	ENSPEMG00000002731	Gnl1	99	89.402	Peromyscus_maniculatus_bairdii
ENSODEG00000018111	GNL1	100	82.430	ENSPCIG00000014975	GNL1	100	81.773	Phascolarctos_cinereus
ENSODEG00000018111	GNL1	90	58.813	ENSPFOG00000015398	gnl1	99	55.128	Poecilia_formosa
ENSODEG00000018111	GNL1	90	58.633	ENSPLAG00000003231	gnl1	99	54.896	Poecilia_latipinna
ENSODEG00000018111	GNL1	90	58.813	ENSPMEG00000005001	gnl1	99	55.128	Poecilia_mexicana
ENSODEG00000018111	GNL1	90	58.813	ENSPREG00000012818	gnl1	99	55.128	Poecilia_reticulata
ENSODEG00000018111	GNL1	100	91.626	ENSPPYG00000016408	GNL1	100	91.461	Pongo_abelii
ENSODEG00000018111	GNL1	56	96.500	ENSPCAG00000004522	-	70	96.500	Procavia_capensis
ENSODEG00000018111	GNL1	100	91.461	ENSPCOG00000015669	GNL1	100	91.297	Propithecus_coquereli
ENSODEG00000018111	GNL1	100	90.820	ENSPVAG00000003970	GNL1	100	90.000	Pteropus_vampyrus
ENSODEG00000018111	GNL1	95	57.653	ENSPNYG00000022614	gnl1	99	55.769	Pundamilia_nyererei
ENSODEG00000018111	GNL1	90	60.289	ENSPNAG00000021257	gnl1	99	57.258	Pygocentrus_nattereri
ENSODEG00000018111	GNL1	100	90.312	ENSRNOG00000000798	Gnl1	100	90.312	Rattus_norvegicus
ENSODEG00000018111	GNL1	100	91.297	ENSRBIG00000019143	GNL1	100	91.297	Rhinopithecus_bieti
ENSODEG00000018111	GNL1	100	91.297	ENSRROG00000030029	GNL1	100	91.297	Rhinopithecus_roxellana
ENSODEG00000018111	GNL1	100	91.626	ENSSBOG00000031909	GNL1	100	91.461	Saimiri_boliviensis_boliviensis
ENSODEG00000018111	GNL1	100	79.639	ENSSHAG00000007557	GNL1	100	78.982	Sarcophilus_harrisii
ENSODEG00000018111	GNL1	90	61.091	ENSSFOG00015013921	gnl1	99	57.997	Scleropages_formosus
ENSODEG00000018111	GNL1	94	56.897	ENSSMAG00000010147	gnl1	99	54.647	Scophthalmus_maximus
ENSODEG00000018111	GNL1	95	57.360	ENSSDUG00000013824	gnl1	99	56.051	Seriola_dumerili
ENSODEG00000018111	GNL1	95	57.601	ENSSLDG00000024560	gnl1	99	56.121	Seriola_lalandi_dorsalis
ENSODEG00000018111	GNL1	58	89.627	ENSSARG00000006156	-	84	90.871	Sorex_araneus
ENSODEG00000018111	GNL1	89	69.273	ENSSPUG00000015374	GNL1	100	65.865	Sphenodon_punctatus
ENSODEG00000018111	GNL1	90	60.503	ENSSPAG00000017541	gnl1	99	55.821	Stegastes_partitus
ENSODEG00000018111	GNL1	100	91.954	ENSSSCG00000001372	GNL1	100	91.790	Sus_scrofa
ENSODEG00000018111	GNL1	100	53.323	ENSTRUG00000011226	gnl1	92	51.520	Takifugu_rubripes
ENSODEG00000018111	GNL1	90	56.962	ENSTNIG00000008017	gnl1	91	56.600	Tetraodon_nigroviridis
ENSODEG00000018111	GNL1	100	84.729	ENSTBEG00000007538	GNL1	100	84.565	Tupaia_belangeri
ENSODEG00000018111	GNL1	100	89.984	ENSTTRG00000008287	GNL1	100	90.148	Tursiops_truncatus
ENSODEG00000018111	GNL1	100	90.805	ENSUAMG00000007671	GNL1	100	91.297	Ursus_americanus
ENSODEG00000018111	GNL1	100	85.971	ENSUMAG00000018935	GNL1	100	92.131	Ursus_maritimus
ENSODEG00000018111	GNL1	100	90.640	ENSVVUG00000009537	GNL1	100	90.476	Vulpes_vulpes
ENSODEG00000018111	GNL1	100	61.489	ENSXETG00000024087	gnl1	100	62.621	Xenopus_tropicalis
ENSODEG00000018111	GNL1	91	59.147	ENSXCOG00000019185	gnl1	99	55.288	Xiphophorus_couchianus
ENSODEG00000018111	GNL1	91	58.970	ENSXMAG00000011015	gnl1	99	55.128	Xiphophorus_maculatus