EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000018121 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH8
Alias: GPATC8|KIAA0553
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 61555 bases
Position: chrJH651571.1:11987019-12048573
Accession: 101563411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024770	zf-C2H2_jaz	PF12171.8	2.3e-06	1	1
ENSODEP00000024770	G-patch	PF01585.23	7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025047	GPATCH8-201	4164	XM_004633828	ENSODEP00000024770	1387 (aa)	XP_004633885	-

Gene Model

Click here to download ENSODEG00000018121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018121	GPATCH8	99	83.512	ENSCLAG00000016710	GPATCH8	100	84.023	Chinchilla_lanigera
ENSODEG00000018121	GPATCH8	81	83.117	ENSHGLG00100010738	GPATCH8	99	83.117	Heterocephalus_glaber_male
ENSODEG00000018121	GPATCH8	51	77.885	ENSLOCG00000012265	gpatch8	68	75.000	Lepisosteus_oculatus
ENSODEG00000018121	GPATCH8	53	70.604	ENSLAFG00000032250	GPATCH8	94	75.472	Loxodonta_africana
ENSODEG00000018121	GPATCH8	54	69.328	ENSMOCG00000001658	Gpatch8	89	85.024	Microtus_ochrogaster
ENSODEG00000018121	GPATCH8	71	56.863	ENSMMOG00000020472	gpatch8	78	57.912	Mola_mola
ENSODEG00000018121	GPATCH8	99	69.041	ENSMODG00000011442	GPATCH8	90	80.671	Monodelphis_domestica
ENSODEG00000018121	GPATCH8	61	93.919	ENSMLUG00000013840	GPATCH8	62	94.558	Myotis_lucifugus
ENSODEG00000018121	GPATCH8	74	64.602	ENSMEUG00000011799	GPATCH8	84	78.125	Notamacropus_eugenii
ENSODEG00000018121	GPATCH8	94	83.360	ENSOPRG00000008816	GPATCH8	90	83.923	Ochotona_princeps
ENSODEG00000018121	GPATCH8	95	67.062	ENSPCIG00000019927	GPATCH8	90	80.192	Phascolarctos_cinereus
ENSODEG00000018121	GPATCH8	59	98.396	ENSPCAG00000004441	GPATCH8	55	98.396	Procavia_capensis
ENSODEG00000018121	GPATCH8	73	89.752	ENSTBEG00000009486	GPATCH8	81	89.752	Tupaia_belangeri
ENSODEG00000018121	GPATCH8	51	71.951	ENSVPAG00000006937	GPATCH8	53	72.337	Vicugna_pacos