EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018147 (Gene tree)
Gene ID: 101582338
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 15693 bases
Position: chrJH651613.1:9773428-9789120
Accession: 101582338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024810	PRP4	PF08799.11	4.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025087	PRPF4-201	1815	XM_004638487	ENSODEP00000024810	521 (aa)	XP_004638544	UPI000333DE4A

Gene Model

Click here to download ENSODEG00000018147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018147	PRPF4	56	34.211	ENSODEG00000009236	POC1B	62	34.211
ENSODEG00000018147	PRPF4	56	33.673	ENSODEG00000013930	TBL3	63	33.673
ENSODEG00000018147	PRPF4	56	30.000	ENSODEG00000018290	POC1A	72	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018147	PRPF4	100	99.232	ENSG00000136875	PRPF4	100	99.232	Homo_sapiens
ENSODEG00000018147	PRPF4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSODEG00000018147	PRPF4	100	99.424	ENSAMEG00000013048	PRPF4	98	99.424	Ailuropoda_melanoleuca
ENSODEG00000018147	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSODEG00000018147	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSODEG00000018147	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSODEG00000018147	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSODEG00000018147	PRPF4	100	89.251	ENSAPLG00000006534	PRPF4	97	89.251	Anas_platyrhynchos
ENSODEG00000018147	PRPF4	100	90.057	ENSACAG00000015110	PRPF4	100	90.057	Anolis_carolinensis
ENSODEG00000018147	PRPF4	100	99.616	ENSANAG00000022464	PRPF4	96	99.616	Aotus_nancymaae
ENSODEG00000018147	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSODEG00000018147	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSODEG00000018147	PRPF4	100	98.656	ENSBTAG00000004571	PRPF4	100	98.656	Bos_taurus
ENSODEG00000018147	PRPF4	90	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSODEG00000018147	PRPF4	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSODEG00000018147	PRPF4	100	99.424	ENSCAFG00000003224	PRPF4	97	99.424	Canis_familiaris
ENSODEG00000018147	PRPF4	100	99.424	ENSCAFG00020022637	PRPF4	100	99.424	Canis_lupus_dingo
ENSODEG00000018147	PRPF4	100	99.234	ENSCHIG00000024648	-	100	99.234	Capra_hircus
ENSODEG00000018147	PRPF4	100	99.424	ENSTSYG00000010366	PRPF4	100	99.424	Carlito_syrichta
ENSODEG00000018147	PRPF4	88	89.021	ENSCAPG00000008935	PRPF4	97	89.021	Cavia_aperea
ENSODEG00000018147	PRPF4	100	93.090	ENSCPOG00000014729	-	100	93.090	Cavia_porcellus
ENSODEG00000018147	PRPF4	100	99.616	ENSCPOG00000010747	-	100	99.616	Cavia_porcellus
ENSODEG00000018147	PRPF4	100	99.424	ENSCCAG00000028990	PRPF4	100	99.424	Cebus_capucinus
ENSODEG00000018147	PRPF4	100	99.232	ENSCATG00000021552	PRPF4	100	99.232	Cercocebus_atys
ENSODEG00000018147	PRPF4	100	99.808	ENSCLAG00000013448	PRPF4	100	99.808	Chinchilla_lanigera
ENSODEG00000018147	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSODEG00000018147	PRPF4	99	91.068	ENSCPBG00000019136	PRPF4	74	91.068	Chrysemys_picta_bellii
ENSODEG00000018147	PRPF4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSODEG00000018147	PRPF4	96	57.738	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSODEG00000018147	PRPF4	100	99.424	ENSCANG00000003246	PRPF4	100	99.424	Colobus_angolensis_palliatus
ENSODEG00000018147	PRPF4	100	99.232	ENSCGRG00001016992	Prpf4	100	99.232	Cricetulus_griseus_chok1gshd
ENSODEG00000018147	PRPF4	100	99.232	ENSCGRG00000017560	Prpf4	100	99.232	Cricetulus_griseus_crigri
ENSODEG00000018147	PRPF4	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSODEG00000018147	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSODEG00000018147	PRPF4	100	98.851	ENSDNOG00000013203	PRPF4	100	98.851	Dasypus_novemcinctus
ENSODEG00000018147	PRPF4	100	99.232	ENSDORG00000026275	Prpf4	100	99.232	Dipodomys_ordii
ENSODEG00000018147	PRPF4	87	56.455	FBgn0036733	U4-U6-60K	99	50.365	Drosophila_melanogaster
ENSODEG00000018147	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSODEG00000018147	PRPF4	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSODEG00000018147	PRPF4	100	99.616	ENSEASG00005022678	PRPF4	100	99.616	Equus_asinus_asinus
ENSODEG00000018147	PRPF4	100	99.616	ENSECAG00000007072	PRPF4	100	99.616	Equus_caballus
ENSODEG00000018147	PRPF4	100	78.603	ENSEEUG00000007480	PRPF4	100	78.603	Erinaceus_europaeus
ENSODEG00000018147	PRPF4	97	80.990	ENSELUG00000007510	prpf4	99	80.990	Esox_lucius
ENSODEG00000018147	PRPF4	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSODEG00000018147	PRPF4	98	88.341	ENSFALG00000005423	PRPF4	90	85.591	Ficedula_albicollis
ENSODEG00000018147	PRPF4	100	99.616	ENSFDAG00000005839	PRPF4	100	99.616	Fukomys_damarensis
ENSODEG00000018147	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSODEG00000018147	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	96	89.535	Gallus_gallus
ENSODEG00000018147	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSODEG00000018147	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSODEG00000018147	PRPF4	99	90.874	ENSGAGG00000025029	PRPF4	95	90.874	Gopherus_agassizii
ENSODEG00000018147	PRPF4	100	99.232	ENSGGOG00000006943	PRPF4	100	99.232	Gorilla_gorilla
ENSODEG00000018147	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSODEG00000018147	PRPF4	100	80.998	ENSHGLG00000003838	-	100	80.998	Heterocephalus_glaber_female
ENSODEG00000018147	PRPF4	100	82.218	ENSHGLG00000016628	-	100	82.983	Heterocephalus_glaber_female
ENSODEG00000018147	PRPF4	100	99.616	ENSHGLG00000015191	PRPF4	100	99.616	Heterocephalus_glaber_female
ENSODEG00000018147	PRPF4	100	80.998	ENSHGLG00100005571	-	100	80.998	Heterocephalus_glaber_male
ENSODEG00000018147	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSODEG00000018147	PRPF4	100	99.040	ENSSTOG00000027833	PRPF4	100	99.040	Ictidomys_tridecemlineatus
ENSODEG00000018147	PRPF4	100	99.616	ENSJJAG00000008838	Prpf4	100	99.616	Jaculus_jaculus
ENSODEG00000018147	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSODEG00000018147	PRPF4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSODEG00000018147	PRPF4	99	80.539	ENSLACG00000016317	PRPF4	99	80.539	Latimeria_chalumnae
ENSODEG00000018147	PRPF4	97	81.386	ENSLOCG00000000581	prpf4	99	81.386	Lepisosteus_oculatus
ENSODEG00000018147	PRPF4	100	98.659	ENSLAFG00000018225	PRPF4	100	98.659	Loxodonta_africana
ENSODEG00000018147	PRPF4	100	99.040	ENSMFAG00000039397	PRPF4	100	99.040	Macaca_fascicularis
ENSODEG00000018147	PRPF4	100	99.232	ENSMMUG00000005844	PRPF4	100	99.232	Macaca_mulatta
ENSODEG00000018147	PRPF4	100	88.676	ENSMNEG00000033737	PRPF4	100	88.676	Macaca_nemestrina
ENSODEG00000018147	PRPF4	100	99.232	ENSMLEG00000040284	PRPF4	100	99.232	Mandrillus_leucophaeus
ENSODEG00000018147	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSODEG00000018147	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSODEG00000018147	PRPF4	99	88.462	ENSMGAG00000001796	PRPF4	97	88.462	Meleagris_gallopavo
ENSODEG00000018147	PRPF4	100	98.656	ENSMAUG00000018022	Prpf4	100	98.656	Mesocricetus_auratus
ENSODEG00000018147	PRPF4	100	98.848	ENSMICG00000015022	PRPF4	100	98.659	Microcebus_murinus
ENSODEG00000018147	PRPF4	100	98.656	ENSMOCG00000018273	Prpf4	100	98.656	Microtus_ochrogaster
ENSODEG00000018147	PRPF4	97	74.653	ENSMMOG00000021177	prpf4	99	74.653	Mola_mola
ENSODEG00000018147	PRPF4	100	95.029	ENSMODG00000004444	-	100	95.029	Monodelphis_domestica
ENSODEG00000018147	PRPF4	100	94.837	ENSMODG00000025096	-	97	94.837	Monodelphis_domestica
ENSODEG00000018147	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSODEG00000018147	PRPF4	100	99.040	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.040	Mus_caroli
ENSODEG00000018147	PRPF4	100	99.040	ENSMUSG00000066148	Prpf4	100	99.040	Mus_musculus
ENSODEG00000018147	PRPF4	100	98.848	MGP_PahariEiJ_G0028413	Prpf4	100	98.848	Mus_pahari
ENSODEG00000018147	PRPF4	100	99.040	MGP_SPRETEiJ_G0027042	Prpf4	100	99.040	Mus_spretus
ENSODEG00000018147	PRPF4	100	99.424	ENSMPUG00000007883	PRPF4	100	99.424	Mustela_putorius_furo
ENSODEG00000018147	PRPF4	100	99.424	ENSMLUG00000015309	-	97	99.424	Myotis_lucifugus
ENSODEG00000018147	PRPF4	100	97.505	ENSMLUG00000008626	-	97	97.505	Myotis_lucifugus
ENSODEG00000018147	PRPF4	100	93.858	ENSNGAG00000000468	Prpf4	100	93.858	Nannospalax_galili
ENSODEG00000018147	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSODEG00000018147	PRPF4	100	99.616	ENSNLEG00000016647	PRPF4	100	99.616	Nomascus_leucogenys
ENSODEG00000018147	PRPF4	99	94.747	ENSMEUG00000013256	PRPF4	100	94.747	Notamacropus_eugenii
ENSODEG00000018147	PRPF4	100	98.659	ENSOPRG00000005302	PRPF4	100	98.659	Ochotona_princeps
ENSODEG00000018147	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSODEG00000018147	PRPF4	100	99.424	ENSOCUG00000005046	PRPF4	100	99.424	Oryctolagus_cuniculus
ENSODEG00000018147	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSODEG00000018147	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSODEG00000018147	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSODEG00000018147	PRPF4	100	94.626	ENSOGAG00000007802	PRPF4	98	94.626	Otolemur_garnettii
ENSODEG00000018147	PRPF4	100	99.424	ENSOARG00000006319	PRPF4	97	99.424	Ovis_aries
ENSODEG00000018147	PRPF4	100	99.232	ENSPPAG00000041797	PRPF4	100	99.232	Pan_paniscus
ENSODEG00000018147	PRPF4	100	99.616	ENSPPRG00000014360	PRPF4	100	99.616	Panthera_pardus
ENSODEG00000018147	PRPF4	100	99.616	ENSPTIG00000009574	PRPF4	100	99.616	Panthera_tigris_altaica
ENSODEG00000018147	PRPF4	100	99.232	ENSPTRG00000021274	PRPF4	100	99.042	Pan_troglodytes
ENSODEG00000018147	PRPF4	100	99.232	ENSPANG00000025776	PRPF4	96	99.232	Papio_anubis
ENSODEG00000018147	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSODEG00000018147	PRPF4	100	89.443	ENSPSIG00000010713	PRPF4	91	89.961	Pelodiscus_sinensis
ENSODEG00000018147	PRPF4	99	58.425	ENSPMGG00000000997	prpf4	99	58.532	Periophthalmus_magnuspinnatus
ENSODEG00000018147	PRPF4	100	99.232	ENSPEMG00000024115	Prpf4	100	99.232	Peromyscus_maniculatus_bairdii
ENSODEG00000018147	PRPF4	99	94.747	ENSPCIG00000003821	PRPF4	99	94.747	Phascolarctos_cinereus
ENSODEG00000018147	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSODEG00000018147	PRPF4	82	69.659	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSODEG00000018147	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSODEG00000018147	PRPF4	98	99.025	ENSPCAG00000002561	PRPF4	99	99.025	Procavia_capensis
ENSODEG00000018147	PRPF4	100	99.424	ENSPCOG00000011975	PRPF4	100	99.424	Propithecus_coquereli
ENSODEG00000018147	PRPF4	100	95.402	ENSPVAG00000004708	PRPF4	100	95.402	Pteropus_vampyrus
ENSODEG00000018147	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSODEG00000018147	PRPF4	97	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSODEG00000018147	PRPF4	100	99.232	ENSRNOG00000014777	Prpf4	100	99.232	Rattus_norvegicus
ENSODEG00000018147	PRPF4	100	99.424	ENSRBIG00000040221	PRPF4	100	99.424	Rhinopithecus_bieti
ENSODEG00000018147	PRPF4	100	99.424	ENSRROG00000040240	PRPF4	100	99.424	Rhinopithecus_roxellana
ENSODEG00000018147	PRPF4	100	95.220	ENSSHAG00000017658	PRPF4	100	95.220	Sarcophilus_harrisii
ENSODEG00000018147	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSODEG00000018147	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSODEG00000018147	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSODEG00000018147	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSODEG00000018147	PRPF4	100	90.595	ENSSPUG00000015582	PRPF4	100	90.595	Sphenodon_punctatus
ENSODEG00000018147	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSODEG00000018147	PRPF4	100	99.616	ENSSSCG00000024648	PRPF4	100	99.616	Sus_scrofa
ENSODEG00000018147	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSODEG00000018147	PRPF4	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSODEG00000018147	PRPF4	97	74.653	ENSTNIG00000013250	prpf4	99	74.653	Tetraodon_nigroviridis
ENSODEG00000018147	PRPF4	100	90.996	ENSTBEG00000000821	PRPF4	100	90.996	Tupaia_belangeri
ENSODEG00000018147	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSODEG00000018147	PRPF4	64	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSODEG00000018147	PRPF4	100	98.656	ENSUMAG00000019375	PRPF4	100	98.656	Ursus_maritimus
ENSODEG00000018147	PRPF4	100	99.234	ENSVPAG00000005281	PRPF4	100	99.234	Vicugna_pacos
ENSODEG00000018147	PRPF4	100	98.286	ENSVVUG00000002476	PRPF4	100	98.286	Vulpes_vulpes
ENSODEG00000018147	PRPF4	69	58.333	ENSXCOG00000006101	prpf4	93	59.113	Xiphophorus_couchianus
ENSODEG00000018147	PRPF4	88	64.629	ENSXMAG00000002750	prpf4	98	65.209	Xiphophorus_maculatus