EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018153 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1092 bases
Position: chrJH651523.1:7754724-7755815
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000024817	Ribonuc_P_40	PF08584.11	2e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025094	-	1065	-	ENSODEP00000024817	354 (aa)	-	-

Gene Model

Click here to download ENSODEG00000018153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018153	-	100	93.388	ENSODEG00000007255	-	100	93.388
ENSODEG00000018153	-	88	86.335	ENSODEG00000006170	-	100	86.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018153	-	100	78.788	ENSG00000124787	RPP40	100	78.788	Homo_sapiens
ENSODEG00000018153	-	100	79.614	ENSAMEG00000012938	RPP40	100	79.614	Ailuropoda_melanoleuca
ENSODEG00000018153	-	98	36.494	ENSACIG00000003617	rpp40	98	36.494	Amphilophus_citrinellus
ENSODEG00000018153	-	98	36.415	ENSAOCG00000011846	rpp40	99	36.415	Amphiprion_ocellaris
ENSODEG00000018153	-	98	36.415	ENSAPEG00000001322	rpp40	99	36.415	Amphiprion_percula
ENSODEG00000018153	-	98	37.883	ENSATEG00000006584	rpp40	99	37.883	Anabas_testudineus
ENSODEG00000018153	-	83	63.907	ENSAPLG00000005691	RPP40	99	63.907	Anas_platyrhynchos
ENSODEG00000018153	-	99	60.446	ENSACAG00000006550	RPP40	88	60.446	Anolis_carolinensis
ENSODEG00000018153	-	100	79.063	ENSANAG00000029246	RPP40	100	79.063	Aotus_nancymaae
ENSODEG00000018153	-	98	36.901	ENSACLG00000015883	rpp40	96	36.901	Astatotilapia_calliptera
ENSODEG00000018153	-	98	45.938	ENSAMXG00000001755	rpp40	99	45.938	Astyanax_mexicanus
ENSODEG00000018153	-	100	77.961	ENSBTAG00000003332	RPP40	100	77.961	Bos_taurus
ENSODEG00000018153	-	100	77.961	ENSCJAG00000021373	RPP40	100	77.961	Callithrix_jacchus
ENSODEG00000018153	-	100	78.788	ENSCAFG00000009435	RPP40	100	78.788	Canis_familiaris
ENSODEG00000018153	-	100	78.788	ENSCAFG00020013380	RPP40	100	78.788	Canis_lupus_dingo
ENSODEG00000018153	-	100	78.237	ENSCHIG00000016849	RPP40	100	78.237	Capra_hircus
ENSODEG00000018153	-	100	79.614	ENSTSYG00000032857	RPP40	100	79.614	Carlito_syrichta
ENSODEG00000018153	-	90	75.076	ENSCAPG00000004957	RPP40	98	75.076	Cavia_aperea
ENSODEG00000018153	-	100	83.471	ENSCPOG00000005855	RPP40	100	83.471	Cavia_porcellus
ENSODEG00000018153	-	100	77.961	ENSCCAG00000019809	RPP40	100	77.961	Cebus_capucinus
ENSODEG00000018153	-	100	78.512	ENSCATG00000038787	RPP40	100	78.512	Cercocebus_atys
ENSODEG00000018153	-	100	84.848	ENSCLAG00000003235	RPP40	100	84.848	Chinchilla_lanigera
ENSODEG00000018153	-	100	78.512	ENSCSAG00000007307	RPP40	100	78.512	Chlorocebus_sabaeus
ENSODEG00000018153	-	68	61.200	ENSCHOG00000005856	-	100	61.200	Choloepus_hoffmanni
ENSODEG00000018153	-	99	66.389	ENSCPBG00000009003	RPP40	99	66.389	Chrysemys_picta_bellii
ENSODEG00000018153	-	100	78.788	ENSCANG00000033965	RPP40	100	78.788	Colobus_angolensis_palliatus
ENSODEG00000018153	-	100	73.278	ENSCGRG00001018328	Rpp40	100	73.278	Cricetulus_griseus_chok1gshd
ENSODEG00000018153	-	100	73.278	ENSCGRG00000011344	Rpp40	100	73.278	Cricetulus_griseus_crigri
ENSODEG00000018153	-	98	37.465	ENSCSEG00000015006	-	98	37.465	Cynoglossus_semilaevis
ENSODEG00000018153	-	73	33.955	ENSCVAG00000012169	rpp40	100	33.955	Cyprinodon_variegatus
ENSODEG00000018153	-	99	48.189	ENSDARG00000017605	rpp40	99	48.189	Danio_rerio
ENSODEG00000018153	-	84	77.441	ENSDNOG00000048136	RPP40	99	77.441	Dasypus_novemcinctus
ENSODEG00000018153	-	100	76.033	ENSDORG00000029944	-	100	76.033	Dipodomys_ordii
ENSODEG00000018153	-	100	60.322	ENSDORG00000011196	-	100	60.322	Dipodomys_ordii
ENSODEG00000018153	-	100	60.882	ENSETEG00000007458	RPP40	100	60.882	Echinops_telfairi
ENSODEG00000018153	-	98	41.972	ENSEBUG00000000386	rpp40	99	41.972	Eptatretus_burgeri
ENSODEG00000018153	-	100	79.614	ENSEASG00005012116	RPP40	80	79.614	Equus_asinus_asinus
ENSODEG00000018153	-	100	79.890	ENSECAG00000017247	RPP40	80	79.890	Equus_caballus
ENSODEG00000018153	-	84	61.616	ENSEEUG00000012087	RPP40	100	61.616	Erinaceus_europaeus
ENSODEG00000018153	-	98	46.369	ENSELUG00000017004	rpp40	99	46.369	Esox_lucius
ENSODEG00000018153	-	100	80.716	ENSFCAG00000009249	RPP40	100	80.716	Felis_catus
ENSODEG00000018153	-	86	62.385	ENSFALG00000013166	RPP40	100	62.385	Ficedula_albicollis
ENSODEG00000018153	-	100	84.022	ENSFDAG00000013001	-	100	84.022	Fukomys_damarensis
ENSODEG00000018153	-	81	67.458	ENSFDAG00000000265	-	100	67.458	Fukomys_damarensis
ENSODEG00000018153	-	98	40.336	ENSFHEG00000021429	rpp40	88	40.336	Fundulus_heteroclitus
ENSODEG00000018153	-	88	38.978	ENSGMOG00000018653	rpp40	100	38.978	Gadus_morhua
ENSODEG00000018153	-	99	61.667	ENSGALG00000036074	RPP40	99	61.667	Gallus_gallus
ENSODEG00000018153	-	82	33.670	ENSGAFG00000004189	-	98	33.670	Gambusia_affinis
ENSODEG00000018153	-	98	37.815	ENSGACG00000002472	rpp40	99	37.815	Gasterosteus_aculeatus
ENSODEG00000018153	-	99	67.500	ENSGAGG00000012918	RPP40	99	67.500	Gopherus_agassizii
ENSODEG00000018153	-	100	78.788	ENSGGOG00000013764	RPP40	100	78.788	Gorilla_gorilla
ENSODEG00000018153	-	91	36.364	ENSHBUG00000009378	rpp40	94	36.364	Haplochromis_burtoni
ENSODEG00000018153	-	100	82.645	ENSHGLG00000004871	RPP40	100	82.645	Heterocephalus_glaber_female
ENSODEG00000018153	-	100	82.920	ENSHGLG00100002080	RPP40	100	82.920	Heterocephalus_glaber_male
ENSODEG00000018153	-	95	31.805	ENSHCOG00000013264	-	93	31.805	Hippocampus_comes
ENSODEG00000018153	-	99	43.889	ENSIPUG00000008951	RPP40	99	43.889	Ictalurus_punctatus
ENSODEG00000018153	-	100	78.512	ENSSTOG00000011199	RPP40	100	78.512	Ictidomys_tridecemlineatus
ENSODEG00000018153	-	100	74.105	ENSJJAG00000020629	Rpp40	100	74.105	Jaculus_jaculus
ENSODEG00000018153	-	98	36.415	ENSKMAG00000019358	rpp40	99	36.415	Kryptolebias_marmoratus
ENSODEG00000018153	-	98	38.095	ENSLBEG00000022724	rpp40	99	38.095	Labrus_bergylta
ENSODEG00000018153	-	98	56.022	ENSLACG00000014848	RPP40	99	56.022	Latimeria_chalumnae
ENSODEG00000018153	-	100	51.515	ENSLOCG00000011650	rpp40	100	51.515	Lepisosteus_oculatus
ENSODEG00000018153	-	83	75.908	ENSLAFG00000007530	RPP40	100	75.908	Loxodonta_africana
ENSODEG00000018153	-	100	78.237	ENSMFAG00000043100	RPP40	100	78.237	Macaca_fascicularis
ENSODEG00000018153	-	100	78.512	ENSMMUG00000004966	RPP40	100	78.512	Macaca_mulatta
ENSODEG00000018153	-	100	78.788	ENSMNEG00000041986	RPP40	100	78.788	Macaca_nemestrina
ENSODEG00000018153	-	98	68.908	ENSMLEG00000040851	RPP40	100	72.727	Mandrillus_leucophaeus
ENSODEG00000018153	-	98	38.655	ENSMAMG00000019551	rpp40	98	38.655	Mastacembelus_armatus
ENSODEG00000018153	-	99	37.396	ENSMZEG00005019475	rpp40	99	37.396	Maylandia_zebra
ENSODEG00000018153	-	88	63.665	ENSMGAG00000004009	RPP40	89	63.665	Meleagris_gallopavo
ENSODEG00000018153	-	100	77.135	ENSMAUG00000010268	Rpp40	100	77.135	Mesocricetus_auratus
ENSODEG00000018153	-	100	79.063	ENSMICG00000003297	RPP40	100	73.278	Microcebus_murinus
ENSODEG00000018153	-	100	76.309	ENSMOCG00000000305	Rpp40	100	76.309	Microtus_ochrogaster
ENSODEG00000018153	-	98	33.523	ENSMMOG00000020591	-	99	33.523	Mola_mola
ENSODEG00000018153	-	100	72.527	ENSMODG00000009826	RPP40	100	72.527	Monodelphis_domestica
ENSODEG00000018153	-	98	36.975	ENSMALG00000020133	rpp40	99	36.975	Monopterus_albus
ENSODEG00000018153	-	100	78.788	MGP_CAROLIEiJ_G0018429	Rpp40	100	78.788	Mus_caroli
ENSODEG00000018153	-	100	79.890	ENSMUSG00000021418	Rpp40	100	79.890	Mus_musculus
ENSODEG00000018153	-	100	78.237	MGP_PahariEiJ_G0019497	Rpp40	100	78.237	Mus_pahari
ENSODEG00000018153	-	100	79.890	MGP_SPRETEiJ_G0019309	Rpp40	100	79.890	Mus_spretus
ENSODEG00000018153	-	100	79.063	ENSMPUG00000000530	RPP40	93	79.063	Mustela_putorius_furo
ENSODEG00000018153	-	100	77.961	ENSMLUG00000000501	RPP40	100	77.961	Myotis_lucifugus
ENSODEG00000018153	-	95	71.965	ENSNGAG00000022529	-	100	71.965	Nannospalax_galili
ENSODEG00000018153	-	100	79.614	ENSNGAG00000023955	-	100	79.614	Nannospalax_galili
ENSODEG00000018153	-	88	32.817	ENSNBRG00000017465	rpp40	86	33.028	Neolamprologus_brichardi
ENSODEG00000018153	-	100	77.961	ENSNLEG00000034397	RPP40	100	77.961	Nomascus_leucogenys
ENSODEG00000018153	-	100	66.667	ENSMEUG00000005300	RPP40	100	66.667	Notamacropus_eugenii
ENSODEG00000018153	-	99	37.119	ENSONIG00000014016	rpp40	99	37.119	Oreochromis_niloticus
ENSODEG00000018153	-	83	66.997	ENSOANG00000001200	RPP40	99	66.997	Ornithorhynchus_anatinus
ENSODEG00000018153	-	99	68.698	ENSOCUG00000000354	RPP40	99	68.698	Oryctolagus_cuniculus
ENSODEG00000018153	-	99	36.592	ENSORLG00000008242	-	100	36.592	Oryzias_latipes
ENSODEG00000018153	-	97	36.857	ENSORLG00020013745	-	89	36.857	Oryzias_latipes_hni
ENSODEG00000018153	-	99	36.872	ENSORLG00015000887	-	100	36.872	Oryzias_latipes_hsok
ENSODEG00000018153	-	99	37.151	ENSOMEG00000002747	rpp40	100	37.151	Oryzias_melastigma
ENSODEG00000018153	-	100	79.339	ENSOGAG00000006055	RPP40	100	79.339	Otolemur_garnettii
ENSODEG00000018153	-	91	73.874	ENSOARG00000018783	RPP40	100	75.248	Ovis_aries
ENSODEG00000018153	-	100	78.788	ENSPPAG00000023703	RPP40	100	78.788	Pan_paniscus
ENSODEG00000018153	-	100	80.441	ENSPPRG00000005612	RPP40	100	80.441	Panthera_pardus
ENSODEG00000018153	-	100	74.931	ENSPTIG00000018847	RPP40	100	74.931	Panthera_tigris_altaica
ENSODEG00000018153	-	100	79.063	ENSPTRG00000017690	RPP40	100	79.063	Pan_troglodytes
ENSODEG00000018153	-	100	78.788	ENSPANG00000017865	RPP40	100	78.788	Papio_anubis
ENSODEG00000018153	-	98	45.810	ENSPKIG00000006311	rpp40	99	45.682	Paramormyrops_kingsleyae
ENSODEG00000018153	-	60	65.315	ENSPSIG00000007854	RPP40	100	65.315	Pelodiscus_sinensis
ENSODEG00000018153	-	97	65.439	ENSPEMG00000020809	Rpp40	96	65.439	Peromyscus_maniculatus_bairdii
ENSODEG00000018153	-	75	41.606	ENSPMAG00000008412	rpp40	99	41.606	Petromyzon_marinus
ENSODEG00000018153	-	100	74.105	ENSPCIG00000010682	RPP40	100	74.105	Phascolarctos_cinereus
ENSODEG00000018153	-	98	35.933	ENSPFOG00000011460	rpp40	98	35.933	Poecilia_formosa
ENSODEG00000018153	-	98	36.415	ENSPLAG00000001334	rpp40	99	36.415	Poecilia_latipinna
ENSODEG00000018153	-	98	36.134	ENSPMEG00000007721	rpp40	99	36.134	Poecilia_mexicana
ENSODEG00000018153	-	98	36.695	ENSPREG00000009215	rpp40	99	36.695	Poecilia_reticulata
ENSODEG00000018153	-	100	78.512	ENSPPYG00000016194	RPP40	100	78.512	Pongo_abelii
ENSODEG00000018153	-	52	83.696	ENSPCAG00000002700	-	99	83.696	Procavia_capensis
ENSODEG00000018153	-	100	80.165	ENSPCOG00000003907	RPP40	100	80.165	Propithecus_coquereli
ENSODEG00000018153	-	100	79.339	ENSPVAG00000011325	RPP40	100	79.339	Pteropus_vampyrus
ENSODEG00000018153	-	82	36.242	ENSPNYG00000004432	rpp40	98	36.242	Pundamilia_nyererei
ENSODEG00000018153	-	98	44.134	ENSPNAG00000019125	rpp40	99	44.134	Pygocentrus_nattereri
ENSODEG00000018153	-	100	77.686	ENSRNOG00000016226	Rpp40	100	77.686	Rattus_norvegicus
ENSODEG00000018153	-	100	79.339	ENSRBIG00000035800	RPP40	100	79.339	Rhinopithecus_bieti
ENSODEG00000018153	-	100	79.339	ENSRROG00000039116	RPP40	100	79.339	Rhinopithecus_roxellana
ENSODEG00000018153	-	100	77.686	ENSSBOG00000020297	RPP40	100	77.686	Saimiri_boliviensis_boliviensis
ENSODEG00000018153	-	76	70.504	ENSSHAG00000002102	RPP40	100	70.504	Sarcophilus_harrisii
ENSODEG00000018153	-	99	46.281	ENSSFOG00015001142	rpp40	81	46.281	Scleropages_formosus
ENSODEG00000018153	-	98	36.695	ENSSDUG00000007202	rpp40	99	36.695	Seriola_dumerili
ENSODEG00000018153	-	98	36.415	ENSSLDG00000017563	rpp40	99	36.415	Seriola_lalandi_dorsalis
ENSODEG00000018153	-	99	64.444	ENSSPUG00000017487	-	99	64.444	Sphenodon_punctatus
ENSODEG00000018153	-	81	62.712	ENSSPUG00000018950	-	100	62.712	Sphenodon_punctatus
ENSODEG00000018153	-	98	37.255	ENSSPAG00000022716	rpp40	99	37.255	Stegastes_partitus
ENSODEG00000018153	-	100	76.033	ENSSSCG00000000998	RPP40	100	76.033	Sus_scrofa
ENSODEG00000018153	-	99	62.291	ENSTGUG00000002258	-	100	62.291	Taeniopygia_guttata
ENSODEG00000018153	-	97	37.677	ENSTRUG00000003755	rpp40	98	37.677	Takifugu_rubripes
ENSODEG00000018153	-	97	36.544	ENSTNIG00000003077	rpp40	98	36.544	Tetraodon_nigroviridis
ENSODEG00000018153	-	68	52.400	ENSTBEG00000014467	-	73	52.400	Tupaia_belangeri
ENSODEG00000018153	-	99	71.271	ENSTTRG00000007319	RPP40	100	71.271	Tursiops_truncatus
ENSODEG00000018153	-	100	79.890	ENSUAMG00000002159	RPP40	100	79.890	Ursus_americanus
ENSODEG00000018153	-	100	79.890	ENSUMAG00000018639	RPP40	94	79.890	Ursus_maritimus
ENSODEG00000018153	-	82	59.727	ENSVPAG00000004652	-	99	59.727	Vicugna_pacos
ENSODEG00000018153	-	100	78.788	ENSVVUG00000005451	RPP40	100	78.788	Vulpes_vulpes
ENSODEG00000018153	-	99	49.722	ENSXETG00000017617	rpp40	100	49.041	Xenopus_tropicalis