EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018290 (Gene tree)
Gene ID: 101567408
Gene Symbol: POC1A
Alias: DKFZP434C245|WDR51A
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 81872 bases
Position: chrJH651523.1:17570105-17651976
Accession: 101567408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025000	eIF2A	PF08662.11	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025278	POC1A-201	1212	XM_004625163	ENSODEP00000025000	403 (aa)	XP_004625220	-

Gene Model

Click here to download ENSODEG00000018290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018290	POC1A	72	30.000	ENSODEG00000018147	PRPF4	56	30.000
ENSODEG00000018290	POC1A	75	31.818	ENSODEG00000000136	WDR3	68	31.818
ENSODEG00000018290	POC1A	77	35.019	ENSODEG00000015612	-	91	35.019
ENSODEG00000018290	POC1A	74	64.983	ENSODEG00000009236	POC1B	99	64.983
ENSODEG00000018290	POC1A	88	34.902	ENSODEG00000019471	WDR5B	92	34.902
ENSODEG00000018290	POC1A	72	33.529	ENSODEG00000013848	-	97	31.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018290	POC1A	99	91.811	ENSG00000164087	POC1A	100	91.644	Homo_sapiens
ENSODEG00000018290	POC1A	96	78.986	ENSAPOG00000002677	POC1A	98	78.986	Acanthochromis_polyacanthus
ENSODEG00000018290	POC1A	100	91.832	ENSAMEG00000009136	POC1A	98	91.832	Ailuropoda_melanoleuca
ENSODEG00000018290	POC1A	98	63.059	ENSACIG00000018288	poc1a	96	63.059	Amphilophus_citrinellus
ENSODEG00000018290	POC1A	98	70.574	ENSAOCG00000001066	POC1A	98	78.986	Amphiprion_ocellaris
ENSODEG00000018290	POC1A	98	79.000	ENSAPEG00000005795	poc1a	88	79.000	Amphiprion_percula
ENSODEG00000018290	POC1A	99	78.304	ENSAPLG00000007756	POC1A	99	78.304	Anas_platyrhynchos
ENSODEG00000018290	POC1A	99	91.563	ENSANAG00000030897	POC1A	99	91.563	Aotus_nancymaae
ENSODEG00000018290	POC1A	99	66.749	ENSACLG00000017869	POC1A	98	66.749	Astatotilapia_calliptera
ENSODEG00000018290	POC1A	75	77.333	ENSAMXG00000024703	poc1a	85	77.333	Astyanax_mexicanus
ENSODEG00000018290	POC1A	99	90.027	ENSBTAG00000001471	POC1A	100	90.027	Bos_taurus
ENSODEG00000018290	POC1A	99	90.819	ENSCJAG00000005972	POC1A	99	90.819	Callithrix_jacchus
ENSODEG00000018290	POC1A	99	86.104	ENSCAFG00020022379	POC1A	98	86.104	Canis_lupus_dingo
ENSODEG00000018290	POC1A	99	90.819	ENSCHIG00000002571	POC1A	99	90.819	Capra_hircus
ENSODEG00000018290	POC1A	99	92.308	ENSTSYG00000008302	POC1A	99	92.308	Carlito_syrichta
ENSODEG00000018290	POC1A	92	83.827	ENSCAPG00000016201	POC1A	89	83.827	Cavia_aperea
ENSODEG00000018290	POC1A	100	95.297	ENSCPOG00000006740	POC1A	99	95.297	Cavia_porcellus
ENSODEG00000018290	POC1A	99	91.563	ENSCCAG00000023380	POC1A	99	91.563	Cebus_capucinus
ENSODEG00000018290	POC1A	99	90.571	ENSCATG00000021822	POC1A	99	90.571	Cercocebus_atys
ENSODEG00000018290	POC1A	99	91.294	ENSCLAG00000010593	POC1A	98	91.294	Chinchilla_lanigera
ENSODEG00000018290	POC1A	98	90.566	ENSCSAG00000013862	POC1A	100	90.566	Chlorocebus_sabaeus
ENSODEG00000018290	POC1A	69	86.347	ENSCPBG00000016728	POC1A	98	86.347	Chrysemys_picta_bellii
ENSODEG00000018290	POC1A	97	63.969	ENSCSAVG00000008477	-	99	63.969	Ciona_savignyi
ENSODEG00000018290	POC1A	98	90.541	ENSCANG00000033064	POC1A	99	90.541	Colobus_angolensis_palliatus
ENSODEG00000018290	POC1A	99	88.750	ENSCGRG00001007357	Poc1a	98	88.750	Cricetulus_griseus_chok1gshd
ENSODEG00000018290	POC1A	97	65.816	ENSCSEG00000010287	POC1A	93	65.816	Cynoglossus_semilaevis
ENSODEG00000018290	POC1A	98	66.748	ENSCVAG00000015594	POC1A	97	77.703	Cyprinodon_variegatus
ENSODEG00000018290	POC1A	77	67.516	ENSEBUG00000002614	POC1A	94	67.516	Eptatretus_burgeri
ENSODEG00000018290	POC1A	67	60.000	ENSEBUG00000008246	POC1A	55	59.184	Eptatretus_burgeri
ENSODEG00000018290	POC1A	72	61.592	ENSEBUG00000008013	poc1a	83	61.592	Eptatretus_burgeri
ENSODEG00000018290	POC1A	98	68.010	ENSELUG00000015504	poc1a	97	67.172	Esox_lucius
ENSODEG00000018290	POC1A	99	92.308	ENSFCAG00000015704	POC1A	99	92.308	Felis_catus
ENSODEG00000018290	POC1A	99	75.124	ENSFALG00000008922	POC1A	99	75.124	Ficedula_albicollis
ENSODEG00000018290	POC1A	100	94.802	ENSFDAG00000011606	POC1A	99	94.802	Fukomys_damarensis
ENSODEG00000018290	POC1A	97	65.816	ENSFHEG00000015504	POC1A	95	65.816	Fundulus_heteroclitus
ENSODEG00000018290	POC1A	99	75.439	ENSGALG00000034572	-	98	74.933	Gallus_gallus
ENSODEG00000018290	POC1A	99	68.828	ENSGACG00000007015	poc1a	96	68.828	Gasterosteus_aculeatus
ENSODEG00000018290	POC1A	99	77.000	ENSGAGG00000014637	POC1A	97	77.000	Gopherus_agassizii
ENSODEG00000018290	POC1A	99	91.563	ENSGGOG00000006652	POC1A	99	91.563	Gorilla_gorilla
ENSODEG00000018290	POC1A	99	95.037	ENSHGLG00000013436	POC1A	99	95.037	Heterocephalus_glaber_female
ENSODEG00000018290	POC1A	99	95.037	ENSHGLG00100003479	POC1A	99	95.037	Heterocephalus_glaber_male
ENSODEG00000018290	POC1A	98	67.929	ENSIPUG00000001227	POC1A	96	67.308	Ictalurus_punctatus
ENSODEG00000018290	POC1A	99	91.811	ENSSTOG00000002638	POC1A	99	91.811	Ictidomys_tridecemlineatus
ENSODEG00000018290	POC1A	99	91.811	ENSJJAG00000018739	Poc1a	99	91.811	Jaculus_jaculus
ENSODEG00000018290	POC1A	85	80.851	ENSLBEG00000016119	POC1A	97	61.184	Labrus_bergylta
ENSODEG00000018290	POC1A	99	68.372	ENSLACG00000018788	POC1A	88	79.739	Latimeria_chalumnae
ENSODEG00000018290	POC1A	99	71.921	ENSLOCG00000013801	poc1a	96	71.921	Lepisosteus_oculatus
ENSODEG00000018290	POC1A	100	83.498	ENSLAFG00000028434	POC1A	99	86.622	Loxodonta_africana
ENSODEG00000018290	POC1A	92	90.296	ENSMFAG00000001970	POC1A	100	90.296	Macaca_fascicularis
ENSODEG00000018290	POC1A	99	90.571	ENSMMUG00000012485	POC1A	99	90.571	Macaca_mulatta
ENSODEG00000018290	POC1A	92	90.027	ENSMNEG00000042811	POC1A	100	90.027	Macaca_nemestrina
ENSODEG00000018290	POC1A	92	90.296	ENSMLEG00000039574	POC1A	100	90.296	Mandrillus_leucophaeus
ENSODEG00000018290	POC1A	97	62.791	ENSMAMG00000014233	POC1A	98	62.791	Mastacembelus_armatus
ENSODEG00000018290	POC1A	99	63.067	ENSMZEG00005013503	POC1A	98	63.067	Maylandia_zebra
ENSODEG00000018290	POC1A	99	69.457	ENSMGAG00000001628	POC1A	98	69.457	Meleagris_gallopavo
ENSODEG00000018290	POC1A	99	91.000	ENSMAUG00000017403	Poc1a	98	91.000	Mesocricetus_auratus
ENSODEG00000018290	POC1A	99	92.289	ENSMICG00000002709	POC1A	99	92.289	Microcebus_murinus
ENSODEG00000018290	POC1A	93	91.153	ENSMOCG00000003396	Poc1a	98	91.622	Microtus_ochrogaster
ENSODEG00000018290	POC1A	99	64.987	ENSMMOG00000010427	poc1a	93	64.987	Mola_mola
ENSODEG00000018290	POC1A	92	77.688	ENSMODG00000011717	POC1A	96	77.688	Monodelphis_domestica
ENSODEG00000018290	POC1A	98	65.909	ENSMALG00000009054	poc1a	93	65.909	Monopterus_albus
ENSODEG00000018290	POC1A	100	90.099	MGP_CAROLIEiJ_G0032617	Poc1a	99	90.099	Mus_caroli
ENSODEG00000018290	POC1A	100	89.851	ENSMUSG00000023345	Poc1a	100	89.488	Mus_musculus
ENSODEG00000018290	POC1A	100	89.604	MGP_PahariEiJ_G0015485	Poc1a	99	89.604	Mus_pahari
ENSODEG00000018290	POC1A	100	89.604	MGP_SPRETEiJ_G0033763	Poc1a	99	89.604	Mus_spretus
ENSODEG00000018290	POC1A	99	91.563	ENSMPUG00000011723	POC1A	99	91.563	Mustela_putorius_furo
ENSODEG00000018290	POC1A	99	89.578	ENSMLUG00000015092	POC1A	91	89.578	Myotis_lucifugus
ENSODEG00000018290	POC1A	100	91.832	ENSNGAG00000005212	Poc1a	99	91.832	Nannospalax_galili
ENSODEG00000018290	POC1A	98	65.534	ENSNBRG00000022135	poc1a	98	65.534	Neolamprologus_brichardi
ENSODEG00000018290	POC1A	92	90.566	ENSNLEG00000007084	POC1A	100	90.566	Nomascus_leucogenys
ENSODEG00000018290	POC1A	80	100.000	ENSMEUG00000007715	-	78	100.000	Notamacropus_eugenii
ENSODEG00000018290	POC1A	99	89.037	ENSOPRG00000008831	POC1A	91	89.037	Ochotona_princeps
ENSODEG00000018290	POC1A	99	62.203	ENSONIG00000014378	POC1A	98	62.203	Oreochromis_niloticus
ENSODEG00000018290	POC1A	99	90.566	ENSOCUG00000002080	POC1A	100	90.566	Oryctolagus_cuniculus
ENSODEG00000018290	POC1A	97	77.273	ENSOMEG00000019834	POC1A	96	59.956	Oryzias_melastigma
ENSODEG00000018290	POC1A	100	85.714	ENSOGAG00000032245	POC1A	99	85.714	Otolemur_garnettii
ENSODEG00000018290	POC1A	100	90.594	ENSOARG00000006352	POC1A	99	90.571	Ovis_aries
ENSODEG00000018290	POC1A	92	91.375	ENSPPAG00000043583	POC1A	100	91.375	Pan_paniscus
ENSODEG00000018290	POC1A	99	92.308	ENSPPRG00000003365	POC1A	99	92.308	Panthera_pardus
ENSODEG00000018290	POC1A	99	91.914	ENSPTIG00000005388	POC1A	100	91.914	Panthera_tigris_altaica
ENSODEG00000018290	POC1A	92	91.644	ENSPTRG00000014989	POC1A	100	91.644	Pan_troglodytes
ENSODEG00000018290	POC1A	77	84.839	ENSPSIG00000014809	POC1A	88	84.839	Pelodiscus_sinensis
ENSODEG00000018290	POC1A	97	70.558	ENSPMGG00000005356	poc1a	95	70.558	Periophthalmus_magnuspinnatus
ENSODEG00000018290	POC1A	92	89.247	ENSPEMG00000024131	Poc1a	98	91.900	Peromyscus_maniculatus_bairdii
ENSODEG00000018290	POC1A	77	77.044	ENSPMAG00000000333	poc1a	69	77.044	Petromyzon_marinus
ENSODEG00000018290	POC1A	99	78.643	ENSPCIG00000018160	POC1A	98	78.643	Phascolarctos_cinereus
ENSODEG00000018290	POC1A	99	92.060	ENSPPYG00000013816	POC1A	99	92.060	Pongo_abelii
ENSODEG00000018290	POC1A	99	88.834	ENSPCAG00000002118	POC1A	99	88.834	Procavia_capensis
ENSODEG00000018290	POC1A	99	91.892	ENSPCOG00000012625	POC1A	100	91.892	Propithecus_coquereli
ENSODEG00000018290	POC1A	99	71.464	ENSPVAG00000012480	POC1A	99	71.464	Pteropus_vampyrus
ENSODEG00000018290	POC1A	99	69.479	ENSPNYG00000019517	poc1a	98	69.479	Pundamilia_nyererei
ENSODEG00000018290	POC1A	99	69.811	ENSPNAG00000007556	POC1A	96	69.811	Pygocentrus_nattereri
ENSODEG00000018290	POC1A	99	85.484	ENSRNOG00000037295	Poc1a	100	85.484	Rattus_norvegicus
ENSODEG00000018290	POC1A	98	90.836	ENSRBIG00000031748	POC1A	100	90.836	Rhinopithecus_bieti
ENSODEG00000018290	POC1A	92	90.836	ENSRROG00000044472	POC1A	100	90.836	Rhinopithecus_roxellana
ENSODEG00000018290	POC1A	92	91.644	ENSSBOG00000027902	POC1A	100	91.644	Saimiri_boliviensis_boliviensis
ENSODEG00000018290	POC1A	98	68.182	ENSSMAG00000013505	POC1A	95	68.182	Scophthalmus_maximus
ENSODEG00000018290	POC1A	89	80.851	ENSSDUG00000016161	POC1A	97	58.186	Seriola_dumerili
ENSODEG00000018290	POC1A	97	80.851	ENSSLDG00000003828	POC1A	95	77.509	Seriola_lalandi_dorsalis
ENSODEG00000018290	POC1A	94	81.633	ENSSPUG00000008656	POC1A	99	62.955	Sphenodon_punctatus
ENSODEG00000018290	POC1A	96	51.579	ENSSPAG00000020330	POC1A	93	57.635	Stegastes_partitus
ENSODEG00000018290	POC1A	99	92.060	ENSSSCG00000011426	POC1A	99	92.060	Sus_scrofa
ENSODEG00000018290	POC1A	99	74.314	ENSTGUG00000006036	POC1A	99	74.314	Taeniopygia_guttata
ENSODEG00000018290	POC1A	98	59.796	ENSTRUG00000007900	POC1A	96	59.796	Takifugu_rubripes
ENSODEG00000018290	POC1A	98	55.158	ENSTNIG00000014818	POC1A	97	55.158	Tetraodon_nigroviridis
ENSODEG00000018290	POC1A	99	86.600	ENSTTRG00000016798	POC1A	99	86.600	Tursiops_truncatus
ENSODEG00000018290	POC1A	100	91.584	ENSUAMG00000020816	POC1A	99	91.584	Ursus_americanus
ENSODEG00000018290	POC1A	98	91.105	ENSUMAG00000021482	POC1A	100	91.105	Ursus_maritimus
ENSODEG00000018290	POC1A	98	65.476	ENSXETG00000010813	poc1a	98	63.288	Xenopus_tropicalis