EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018393 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 1489 bases
Position: chrJH651518.1:25939606-25941094
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025129	SF3a60_bindingd	PF12108.8	5.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025407	-	1392	-	ENSODEP00000025129	463 (aa)	-	-

Gene Model

Click here to download ENSODEG00000018393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018393	-	100	85.193	ENSODEG00000007470	-	100	85.396
ENSODEG00000018393	-	100	86.613	ENSODEG00000006854	-	100	86.613
ENSODEG00000018393	-	100	81.328	ENSODEG00000000937	-	100	81.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018393	-	100	87.026	ENSG00000183431	SF3A3	100	87.226	Homo_sapiens
ENSODEG00000018393	-	100	79.441	ENSAPOG00000015608	sf3a3	100	79.641	Acanthochromis_polyacanthus
ENSODEG00000018393	-	100	87.026	ENSAMEG00000001262	SF3A3	100	87.226	Ailuropoda_melanoleuca
ENSODEG00000018393	-	95	73.964	ENSACIG00000009061	sf3a3	99	73.964	Amphilophus_citrinellus
ENSODEG00000018393	-	100	80.040	ENSAOCG00000013954	sf3a3	100	80.240	Amphiprion_ocellaris
ENSODEG00000018393	-	100	80.040	ENSAPEG00000007297	sf3a3	100	80.240	Amphiprion_percula
ENSODEG00000018393	-	100	79.242	ENSATEG00000008754	sf3a3	100	79.441	Anabas_testudineus
ENSODEG00000018393	-	93	84.648	ENSAPLG00000014900	SF3A3	100	84.861	Anas_platyrhynchos
ENSODEG00000018393	-	100	83.433	ENSACAG00000017058	SF3A3	100	83.633	Anolis_carolinensis
ENSODEG00000018393	-	99	82.932	ENSANAG00000014878	SF3A3	100	83.133	Aotus_nancymaae
ENSODEG00000018393	-	100	68.607	ENSANAG00000036903	-	100	69.231	Aotus_nancymaae
ENSODEG00000018393	-	100	79.840	ENSACLG00000017977	sf3a3	100	80.040	Astatotilapia_calliptera
ENSODEG00000018393	-	100	80.240	ENSAMXG00000016855	sf3a3	87	80.439	Astyanax_mexicanus
ENSODEG00000018393	-	100	86.826	ENSBTAG00000007299	SF3A3	100	87.026	Bos_taurus
ENSODEG00000018393	-	100	45.726	WBGene00011758	T13H5.4	100	46.322	Caenorhabditis_elegans
ENSODEG00000018393	-	100	87.026	ENSCJAG00000002176	SF3A3	100	87.226	Callithrix_jacchus
ENSODEG00000018393	-	100	87.026	ENSCAFG00000003222	-	100	87.226	Canis_familiaris
ENSODEG00000018393	-	100	87.026	ENSCAFG00000000683	-	100	87.226	Canis_familiaris
ENSODEG00000018393	-	100	87.026	ENSCAFG00020006186	SF3A3	100	87.226	Canis_lupus_dingo
ENSODEG00000018393	-	100	86.826	ENSCHIG00000020638	SF3A3	100	87.026	Capra_hircus
ENSODEG00000018393	-	100	80.838	ENSTSYG00000008417	SF3A3	100	81.238	Carlito_syrichta
ENSODEG00000018393	-	84	54.177	ENSCAPG00000003466	SF3A3	100	55.847	Cavia_aperea
ENSODEG00000018393	-	100	87.226	ENSCPOG00000008660	SF3A3	100	87.425	Cavia_porcellus
ENSODEG00000018393	-	92	64.220	ENSCCAG00000034048	-	100	63.895	Cebus_capucinus
ENSODEG00000018393	-	100	87.026	ENSCCAG00000033732	SF3A3	100	87.226	Cebus_capucinus
ENSODEG00000018393	-	93	74.348	ENSCATG00000041660	-	100	74.565	Cercocebus_atys
ENSODEG00000018393	-	100	87.026	ENSCATG00000043496	SF3A3	100	87.226	Cercocebus_atys
ENSODEG00000018393	-	100	76.242	ENSCATG00000043537	-	100	76.242	Cercocebus_atys
ENSODEG00000018393	-	100	87.026	ENSCLAG00000010838	SF3A3	100	87.226	Chinchilla_lanigera
ENSODEG00000018393	-	95	86.555	ENSCSAG00000001120	SF3A3	100	86.765	Chlorocebus_sabaeus
ENSODEG00000018393	-	68	94.059	ENSCHOG00000006849	SF3A3	69	94.059	Choloepus_hoffmanni
ENSODEG00000018393	-	100	77.890	ENSCPBG00000018291	-	100	77.890	Chrysemys_picta_bellii
ENSODEG00000018393	-	56	76.952	ENSCPBG00000007472	-	77	76.952	Chrysemys_picta_bellii
ENSODEG00000018393	-	100	58.765	ENSCING00000002730	-	100	58.367	Ciona_intestinalis
ENSODEG00000018393	-	100	58.683	ENSCSAVG00000005063	-	100	58.483	Ciona_savignyi
ENSODEG00000018393	-	100	73.650	ENSCANG00000035535	-	100	73.650	Colobus_angolensis_palliatus
ENSODEG00000018393	-	100	87.026	ENSCANG00000042083	SF3A3	100	87.226	Colobus_angolensis_palliatus
ENSODEG00000018393	-	100	87.026	ENSCGRG00001011320	Sf3a3	100	87.226	Cricetulus_griseus_chok1gshd
ENSODEG00000018393	-	100	87.026	ENSCGRG00000012156	Sf3a3	100	87.226	Cricetulus_griseus_crigri
ENSODEG00000018393	-	100	78.443	ENSCSEG00000010401	sf3a3	100	78.643	Cynoglossus_semilaevis
ENSODEG00000018393	-	93	77.612	ENSCVAG00000010239	sf3a3	95	77.825	Cyprinodon_variegatus
ENSODEG00000018393	-	100	79.641	ENSDARG00000100114	sf3a3	100	79.840	Danio_rerio
ENSODEG00000018393	-	90	85.996	ENSDNOG00000046628	SF3A3	99	86.214	Dasypus_novemcinctus
ENSODEG00000018393	-	100	87.026	ENSDORG00000008798	Sf3a3	100	87.226	Dipodomys_ordii
ENSODEG00000018393	-	100	58.020	FBgn0014366	noi	100	58.020	Drosophila_melanogaster
ENSODEG00000018393	-	100	72.112	ENSEBUG00000015411	sf3a3	92	72.112	Eptatretus_burgeri
ENSODEG00000018393	-	100	87.026	ENSEASG00005012906	SF3A3	100	87.226	Equus_asinus_asinus
ENSODEG00000018393	-	100	87.026	ENSECAG00000017333	SF3A3	100	87.226	Equus_caballus
ENSODEG00000018393	-	100	77.246	ENSELUG00000010024	sf3a3	100	77.445	Esox_lucius
ENSODEG00000018393	-	100	87.026	ENSFCAG00000027772	SF3A3	100	87.226	Felis_catus
ENSODEG00000018393	-	100	84.631	ENSFALG00000001003	SF3A3	100	84.830	Ficedula_albicollis
ENSODEG00000018393	-	100	87.226	ENSFDAG00000020908	SF3A3	100	87.425	Fukomys_damarensis
ENSODEG00000018393	-	100	78.044	ENSFHEG00000019107	sf3a3	100	78.244	Fundulus_heteroclitus
ENSODEG00000018393	-	100	77.844	ENSGMOG00000015540	sf3a3	100	78.044	Gadus_morhua
ENSODEG00000018393	-	100	84.631	ENSGALG00000001540	SF3A3	100	84.830	Gallus_gallus
ENSODEG00000018393	-	100	78.643	ENSGAFG00000002320	sf3a3	100	78.842	Gambusia_affinis
ENSODEG00000018393	-	100	79.441	ENSGACG00000007842	sf3a3	100	79.641	Gasterosteus_aculeatus
ENSODEG00000018393	-	100	84.232	ENSGAGG00000014980	SF3A3	100	84.431	Gopherus_agassizii
ENSODEG00000018393	-	100	76.101	ENSGGOG00000022611	-	100	75.472	Gorilla_gorilla
ENSODEG00000018393	-	100	87.026	ENSGGOG00000013928	SF3A3	100	87.226	Gorilla_gorilla
ENSODEG00000018393	-	100	79.840	ENSHBUG00000018158	sf3a3	100	80.040	Haplochromis_burtoni
ENSODEG00000018393	-	100	87.425	ENSHGLG00000012502	SF3A3	100	87.625	Heterocephalus_glaber_female
ENSODEG00000018393	-	100	87.425	ENSHGLG00100010546	SF3A3	100	87.625	Heterocephalus_glaber_male
ENSODEG00000018393	-	100	77.445	ENSHCOG00000015109	sf3a3	100	77.645	Hippocampus_comes
ENSODEG00000018393	-	100	79.242	ENSIPUG00000011603	sf3a3	100	79.441	Ictalurus_punctatus
ENSODEG00000018393	-	100	87.226	ENSSTOG00000001691	SF3A3	100	87.425	Ictidomys_tridecemlineatus
ENSODEG00000018393	-	100	87.026	ENSJJAG00000012404	Sf3a3	100	87.226	Jaculus_jaculus
ENSODEG00000018393	-	100	78.643	ENSKMAG00000007632	sf3a3	100	78.842	Kryptolebias_marmoratus
ENSODEG00000018393	-	100	73.887	ENSLBEG00000000816	sf3a3	100	74.089	Labrus_bergylta
ENSODEG00000018393	-	100	80.639	ENSLOCG00000003273	sf3a3	100	80.838	Lepisosteus_oculatus
ENSODEG00000018393	-	100	75.250	ENSLAFG00000008094	SF3A3	100	75.449	Loxodonta_africana
ENSODEG00000018393	-	100	87.026	ENSMFAG00000043047	SF3A3	100	87.226	Macaca_fascicularis
ENSODEG00000018393	-	93	73.696	ENSMFAG00000036706	-	100	73.913	Macaca_fascicularis
ENSODEG00000018393	-	100	87.026	ENSMMUG00000023199	SF3A3	100	87.226	Macaca_mulatta
ENSODEG00000018393	-	100	71.197	ENSMMUG00000038820	-	100	71.400	Macaca_mulatta
ENSODEG00000018393	-	100	87.026	ENSMNEG00000044291	SF3A3	100	87.226	Macaca_nemestrina
ENSODEG00000018393	-	93	70.652	ENSMNEG00000028686	-	100	70.870	Macaca_nemestrina
ENSODEG00000018393	-	100	75.589	ENSMLEG00000028631	-	100	75.803	Mandrillus_leucophaeus
ENSODEG00000018393	-	100	75.610	ENSMLEG00000036714	-	100	75.813	Mandrillus_leucophaeus
ENSODEG00000018393	-	100	87.026	ENSMLEG00000030641	SF3A3	100	87.226	Mandrillus_leucophaeus
ENSODEG00000018393	-	100	79.441	ENSMAMG00000001942	sf3a3	100	79.641	Mastacembelus_armatus
ENSODEG00000018393	-	100	79.840	ENSMZEG00005016987	sf3a3	100	80.040	Maylandia_zebra
ENSODEG00000018393	-	100	79.523	ENSMGAG00000002875	SF3A3	100	79.722	Meleagris_gallopavo
ENSODEG00000018393	-	100	82.635	ENSMICG00000001485	-	100	82.834	Microcebus_murinus
ENSODEG00000018393	-	100	83.096	ENSMICG00000043548	-	100	82.892	Microcebus_murinus
ENSODEG00000018393	-	91	83.843	ENSMICG00000026541	-	100	83.843	Microcebus_murinus
ENSODEG00000018393	-	94	85.313	ENSMOCG00000014565	-	97	84.881	Microtus_ochrogaster
ENSODEG00000018393	-	100	85.513	ENSMOCG00000019939	-	100	85.714	Microtus_ochrogaster
ENSODEG00000018393	-	100	79.441	ENSMMOG00000014307	sf3a3	100	79.641	Mola_mola
ENSODEG00000018393	-	100	74.460	ENSMODG00000017729	-	100	74.460	Monodelphis_domestica
ENSODEG00000018393	-	100	81.637	ENSMODG00000024045	-	100	82.036	Monodelphis_domestica
ENSODEG00000018393	-	100	79.042	ENSMALG00000004836	sf3a3	100	79.386	Monopterus_albus
ENSODEG00000018393	-	100	87.026	MGP_CAROLIEiJ_G0026449	Sf3a3	100	87.226	Mus_caroli
ENSODEG00000018393	-	100	87.026	ENSMUSG00000028902	Sf3a3	100	87.226	Mus_musculus
ENSODEG00000018393	-	100	83.164	MGP_PahariEiJ_G0028780	Sf3a3	100	83.367	Mus_pahari
ENSODEG00000018393	-	100	87.026	MGP_SPRETEiJ_G0027428	Sf3a3	100	87.226	Mus_spretus
ENSODEG00000018393	-	100	86.627	ENSMLUG00000000991	SF3A3	100	86.826	Myotis_lucifugus
ENSODEG00000018393	-	100	83.773	ENSNGAG00000018032	Sf3a3	100	83.976	Nannospalax_galili
ENSODEG00000018393	-	100	78.044	ENSNLEG00000011720	SF3A3	100	78.244	Nomascus_leucogenys
ENSODEG00000018393	-	100	87.425	ENSOPRG00000012785	SF3A3	100	87.625	Ochotona_princeps
ENSODEG00000018393	-	86	79.770	ENSONIG00000010296	sf3a3	100	79.770	Oreochromis_niloticus
ENSODEG00000018393	-	93	85.714	ENSOANG00000002473	SF3A3	100	85.928	Ornithorhynchus_anatinus
ENSODEG00000018393	-	100	87.425	ENSOCUG00000005407	SF3A3	100	87.625	Oryctolagus_cuniculus
ENSODEG00000018393	-	100	78.443	ENSORLG00000008175	sf3a3	100	78.643	Oryzias_latipes
ENSODEG00000018393	-	100	78.244	ENSORLG00020013708	sf3a3	100	78.443	Oryzias_latipes_hni
ENSODEG00000018393	-	100	78.244	ENSORLG00015004104	sf3a3	100	78.443	Oryzias_latipes_hsok
ENSODEG00000018393	-	100	78.244	ENSOMEG00000020177	sf3a3	100	78.443	Oryzias_melastigma
ENSODEG00000018393	-	100	86.826	ENSOARG00000019950	SF3A3	100	87.026	Ovis_aries
ENSODEG00000018393	-	100	75.052	ENSPPAG00000039955	-	100	74.633	Pan_paniscus
ENSODEG00000018393	-	100	87.026	ENSPPAG00000034066	SF3A3	100	87.226	Pan_paniscus
ENSODEG00000018393	-	100	87.026	ENSPPRG00000001258	SF3A3	100	87.226	Panthera_pardus
ENSODEG00000018393	-	100	87.026	ENSPTIG00000007515	SF3A3	100	87.226	Panthera_tigris_altaica
ENSODEG00000018393	-	100	87.026	ENSPTRG00000000559	SF3A3	100	87.226	Pan_troglodytes
ENSODEG00000018393	-	100	76.101	ENSPTRG00000046013	-	100	75.472	Pan_troglodytes
ENSODEG00000018393	-	100	87.026	ENSPANG00000021859	SF3A3	100	87.226	Papio_anubis
ENSODEG00000018393	-	100	75.594	ENSPANG00000031214	-	100	75.810	Papio_anubis
ENSODEG00000018393	-	100	78.455	ENSPANG00000029393	-	100	78.659	Papio_anubis
ENSODEG00000018393	-	100	80.639	ENSPKIG00000004719	sf3a3	100	80.838	Paramormyrops_kingsleyae
ENSODEG00000018393	-	100	82.107	ENSPSIG00000004273	SF3A3	100	82.306	Pelodiscus_sinensis
ENSODEG00000018393	-	90	77.243	ENSPMGG00000003610	sf3a3	94	77.462	Periophthalmus_magnuspinnatus
ENSODEG00000018393	-	100	87.026	ENSPEMG00000020805	Sf3a3	100	87.226	Peromyscus_maniculatus_bairdii
ENSODEG00000018393	-	57	74.815	ENSPMAG00000001044	sf3a3	98	74.815	Petromyzon_marinus
ENSODEG00000018393	-	100	86.228	ENSPCIG00000025719	SF3A3	100	86.427	Phascolarctos_cinereus
ENSODEG00000018393	-	100	78.842	ENSPFOG00000005284	sf3a3	100	79.042	Poecilia_formosa
ENSODEG00000018393	-	99	75.453	ENSPLAG00000003979	sf3a3	92	75.654	Poecilia_latipinna
ENSODEG00000018393	-	79	75.457	ENSPMEG00000021132	sf3a3	85	75.718	Poecilia_mexicana
ENSODEG00000018393	-	100	78.443	ENSPREG00000013802	sf3a3	100	78.643	Poecilia_reticulata
ENSODEG00000018393	-	100	84.232	ENSPPYG00000001519	SF3A3	100	84.431	Pongo_abelii
ENSODEG00000018393	-	100	81.038	ENSPCAG00000010734	SF3A3	100	81.238	Procavia_capensis
ENSODEG00000018393	-	100	72.255	ENSPCOG00000017131	-	100	72.455	Propithecus_coquereli
ENSODEG00000018393	-	100	76.970	ENSPCOG00000020389	-	100	77.374	Propithecus_coquereli
ENSODEG00000018393	-	100	74.651	ENSPVAG00000010158	SF3A3	100	74.850	Pteropus_vampyrus
ENSODEG00000018393	-	100	79.840	ENSPNYG00000000786	sf3a3	100	80.040	Pundamilia_nyererei
ENSODEG00000018393	-	100	80.040	ENSPNAG00000010298	sf3a3	100	80.240	Pygocentrus_nattereri
ENSODEG00000018393	-	100	87.026	ENSRNOG00000007629	Sf3a3	100	87.226	Rattus_norvegicus
ENSODEG00000018393	-	100	87.026	ENSRBIG00000043567	SF3A3	100	87.226	Rhinopithecus_bieti
ENSODEG00000018393	-	100	65.447	ENSRBIG00000041123	-	100	65.650	Rhinopithecus_bieti
ENSODEG00000018393	-	100	64.300	ENSRBIG00000043833	-	100	64.300	Rhinopithecus_bieti
ENSODEG00000018393	-	100	87.026	ENSRROG00000033888	SF3A3	100	87.226	Rhinopithecus_roxellana
ENSODEG00000018393	-	93	71.522	ENSRROG00000032346	-	100	71.739	Rhinopithecus_roxellana
ENSODEG00000018393	-	100	65.988	ENSSBOG00000026932	-	100	65.580	Saimiri_boliviensis_boliviensis
ENSODEG00000018393	-	93	94.059	ENSSBOG00000032688	SF3A3	100	94.059	Saimiri_boliviensis_boliviensis
ENSODEG00000018393	-	90	85.872	ENSSHAG00000014530	SF3A3	100	86.093	Sarcophilus_harrisii
ENSODEG00000018393	-	100	80.439	ENSSFOG00015005975	sf3a3	100	80.639	Scleropages_formosus
ENSODEG00000018393	-	100	79.042	ENSSMAG00000020213	sf3a3	100	79.242	Scophthalmus_maximus
ENSODEG00000018393	-	100	76.447	ENSSDUG00000011590	sf3a3	100	76.647	Seriola_dumerili
ENSODEG00000018393	-	100	79.840	ENSSLDG00000020635	sf3a3	100	80.040	Seriola_lalandi_dorsalis
ENSODEG00000018393	-	100	83.832	ENSSPUG00000004010	SF3A3	100	84.032	Sphenodon_punctatus
ENSODEG00000018393	-	100	79.441	ENSSPAG00000018653	sf3a3	100	79.641	Stegastes_partitus
ENSODEG00000018393	-	100	87.026	ENSSSCG00000003643	SF3A3	100	87.226	Sus_scrofa
ENSODEG00000018393	-	86	83.908	ENSTGUG00000001466	SF3A3	100	83.945	Taeniopygia_guttata
ENSODEG00000018393	-	100	78.044	ENSTRUG00000009089	sf3a3	100	78.244	Takifugu_rubripes
ENSODEG00000018393	-	100	77.336	ENSTNIG00000009800	sf3a3	100	77.535	Tetraodon_nigroviridis
ENSODEG00000018393	-	100	74.451	ENSTBEG00000007614	SF3A3	100	74.651	Tupaia_belangeri
ENSODEG00000018393	-	100	86.826	ENSTTRG00000013519	SF3A3	100	87.026	Tursiops_truncatus
ENSODEG00000018393	-	100	87.026	ENSUAMG00000006134	SF3A3	100	87.226	Ursus_americanus
ENSODEG00000018393	-	100	87.026	ENSUMAG00000021250	SF3A3	100	87.226	Ursus_maritimus
ENSODEG00000018393	-	70	97.674	ENSVPAG00000004778	SF3A3	73	97.674	Vicugna_pacos
ENSODEG00000018393	-	100	87.190	ENSVVUG00000022908	SF3A3	100	87.397	Vulpes_vulpes
ENSODEG00000018393	-	100	81.275	ENSXETG00000022923	sf3a3	100	80.838	Xenopus_tropicalis
ENSODEG00000018393	-	100	78.643	ENSXMAG00000017165	sf3a3	100	78.842	Xiphophorus_maculatus