EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000018399 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
cleavage and polyadenylation specificity factor subunit 6-like
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Minus strand
Length
1675 bases
Position
chrJH651518.1:32233479-32235153
Accession
101587603
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000025136RRM_1PF00076.221.2e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000025414-1647XM_012514786ENSODEP00000025136548 (aa)XP_012370240-
Gene Model
Click here to download ENSODEG00000018399's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018399's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000018399-6550.000ENSODEG00000002610CPSF77257.542
ENSODEG00000018399-7198.985ENSODEG00000004418-7999.438
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000018399-10097.826ENSG00000111605CPSF610097.826Homo_sapiens
ENSODEG00000018399-7058.273ENSG00000149532CPSF79658.286Homo_sapiens
ENSODEG00000018399-10095.660ENSAMEG00000011781CPSF610095.660Ailuropoda_melanoleuca
ENSODEG00000018399-6439.683ENSAOCG00000012357CPSF77339.796Amphiprion_ocellaris
ENSODEG00000018399-5295.070ENSACAG00000004381CPSF65395.070Anolis_carolinensis
ENSODEG00000018399-6448.020ENSANAG00000024635CPSF76952.198Aotus_nancymaae
ENSODEG00000018399-9797.753ENSANAG00000019240CPSF69997.753Aotus_nancymaae
ENSODEG00000018399-6389.222ENSAMXG00000016745CPSF67589.157Astyanax_mexicanus
ENSODEG00000018399-6550.769ENSBTAG00000015263CPSF77157.386Bos_taurus
ENSODEG00000018399-10097.826ENSBTAG00000007323CPSF610097.826Bos_taurus
ENSODEG00000018399-7750.273ENSCJAG00000019282CPSF78458.192Callithrix_jacchus
ENSODEG00000018399-10097.826ENSCJAG00000001798CPSF610097.826Callithrix_jacchus
ENSODEG00000018399-9797.026ENSCAFG00000000424CPSF610095.872Canis_familiaris
ENSODEG00000018399-6551.795ENSCAFG00000016152CPSF77157.955Canis_familiaris
ENSODEG00000018399-6551.795ENSCAFG00020012753CPSF77157.955Canis_lupus_dingo
ENSODEG00000018399-10097.826ENSCAFG00020016950CPSF610097.826Canis_lupus_dingo
ENSODEG00000018399-6550.769ENSCHIG00000014655CPSF77157.386Capra_hircus
ENSODEG00000018399-10097.826ENSCHIG00000010792CPSF610097.826Capra_hircus
ENSODEG00000018399-9697.744ENSTSYG00000008591CPSF69697.744Carlito_syrichta
ENSODEG00000018399-6551.795ENSTSYG00000010138-7157.955Carlito_syrichta
ENSODEG00000018399-5360.000ENSCAPG00000006384CPSF77057.955Cavia_aperea
ENSODEG00000018399-6551.282ENSCPOG00000009980CPSF77157.955Cavia_porcellus
ENSODEG00000018399-10098.007ENSCPOG00000015201CPSF610098.007Cavia_porcellus
ENSODEG00000018399-10097.826ENSCCAG00000028149CPSF610097.826Cebus_capucinus
ENSODEG00000018399-6551.282ENSCCAG00000032367CPSF77157.386Cebus_capucinus
ENSODEG00000018399-6852.551ENSCATG00000042801CPSF77757.386Cercocebus_atys
ENSODEG00000018399-10097.826ENSCATG00000039288CPSF610097.826Cercocebus_atys
ENSODEG00000018399-9797.749ENSCLAG00000010149CPSF610097.932Chinchilla_lanigera
ENSODEG00000018399-6551.282ENSCLAG00000003174CPSF77157.386Chinchilla_lanigera
ENSODEG00000018399-6852.551ENSCSAG00000006414CPSF77757.386Chlorocebus_sabaeus
ENSODEG00000018399-10091.681ENSCSAG00000004232CPSF610091.681Chlorocebus_sabaeus
ENSODEG00000018399-10090.738ENSCPBG00000013322CPSF610095.833Chrysemys_picta_bellii
ENSODEG00000018399-9697.744ENSCANG00000037294CPSF610097.744Colobus_angolensis_palliatus
ENSODEG00000018399-6553.571ENSCGRG00001020382Cpsf77158.523Cricetulus_griseus_chok1gshd
ENSODEG00000018399-10098.007ENSCGRG00001018082Cpsf610098.007Cricetulus_griseus_chok1gshd
ENSODEG00000018399-7252.294ENSCGRG00000017954Cpsf77759.887Cricetulus_griseus_crigri
ENSODEG00000018399-9995.978ENSCGRG00000016909Cpsf610097.932Cricetulus_griseus_crigri
ENSODEG00000018399-5178.873ENSCSEG00000008967cpsf65278.873Cynoglossus_semilaevis
ENSODEG00000018399-5142.268ENSCSEG00000001956CPSF75746.853Cynoglossus_semilaevis
ENSODEG00000018399-6836.364ENSCVAG00000007392CPSF76645.517Cyprinodon_variegatus
ENSODEG00000018399-7878.161ENSCVAG00000014857cpsf65275.000Cyprinodon_variegatus
ENSODEG00000018399-5179.433ENSDARG00000018618cpsf65279.433Danio_rerio
ENSODEG00000018399-7750.820ENSDNOG00000018517CPSF78458.757Dasypus_novemcinctus
ENSODEG00000018399-10097.645ENSDNOG00000015292CPSF610097.645Dasypus_novemcinctus
ENSODEG00000018399-9697.932ENSDORG00000002950Cpsf69897.932Dipodomys_ordii
ENSODEG00000018399-10084.720ENSETEG00000002097CPSF610084.720Echinops_telfairi
ENSODEG00000018399-6551.531ENSETEG00000003765CPSF77156.818Echinops_telfairi
ENSODEG00000018399-6551.795ENSEASG00005008196CPSF77157.955Equus_asinus_asinus
ENSODEG00000018399-10097.826ENSEASG00005008066CPSF610097.826Equus_asinus_asinus
ENSODEG00000018399-7750.820ENSECAG00000018521CPSF79158.757Equus_caballus
ENSODEG00000018399-10097.826ENSECAG00000015988CPSF610097.826Equus_caballus
ENSODEG00000018399-9690.685ENSEEUG00000015039CPSF610090.685Erinaceus_europaeus
ENSODEG00000018399-7750.820ENSFCAG00000013677CPSF79158.757Felis_catus
ENSODEG00000018399-10097.645ENSFCAG00000002855CPSF610097.645Felis_catus
ENSODEG00000018399-6455.914ENSFALG00000011927CPSF77657.803Ficedula_albicollis
ENSODEG00000018399-9796.248ENSFALG00000010157CPSF610096.248Ficedula_albicollis
ENSODEG00000018399-9995.455ENSFDAG00000002281CPSF69995.455Fukomys_damarensis
ENSODEG00000018399-9640.000ENSFDAG00000003919CPSF77157.955Fukomys_damarensis
ENSODEG00000018399-5274.503ENSFHEG00000019693cpsf65471.154Fundulus_heteroclitus
ENSODEG00000018399-5491.736ENSGMOG00000012951cpsf65492.623Gadus_morhua
ENSODEG00000018399-6552.850ENSGALG00000040962CPSF76358.046Gallus_gallus
ENSODEG00000018399-10090.738ENSGAGG00000010228CPSF610095.833Gopherus_agassizii
ENSODEG00000018399-10098.007ENSGGOG00000008211CPSF610098.007Gorilla_gorilla
ENSODEG00000018399-10098.007ENSHGLG00000000792CPSF610098.007Heterocephalus_glaber_female
ENSODEG00000018399-6851.282ENSHGLG00000019090-7757.955Heterocephalus_glaber_female
ENSODEG00000018399-9697.932ENSHGLG00100013861CPSF610097.932Heterocephalus_glaber_male
ENSODEG00000018399-8851.282ENSHGLG00100013933-7857.955Heterocephalus_glaber_male
ENSODEG00000018399-9697.744ENSSTOG00000014133CPSF610097.744Ictidomys_tridecemlineatus
ENSODEG00000018399-6551.795ENSSTOG00000007708CPSF77157.955Ictidomys_tridecemlineatus
ENSODEG00000018399-6851.795ENSJJAG00000019390Cpsf77757.955Jaculus_jaculus
ENSODEG00000018399-9797.749ENSJJAG00000014647Cpsf69997.749Jaculus_jaculus
ENSODEG00000018399-8239.773ENSLBEG00000000947CPSF78531.884Labrus_bergylta
ENSODEG00000018399-9593.282ENSLACG00000008625CPSF69593.487Latimeria_chalumnae
ENSODEG00000018399-6344.304ENSLACG00000005542CPSF77044.304Latimeria_chalumnae
ENSODEG00000018399-6794.118ENSLOCG00000016190cpsf66794.152Lepisosteus_oculatus
ENSODEG00000018399-10097.826ENSLAFG00000030413CPSF610097.826Loxodonta_africana
ENSODEG00000018399-6552.308ENSLAFG00000032084CPSF77158.523Loxodonta_africana
ENSODEG00000018399-6551.282ENSMFAG00000001401CPSF77157.386Macaca_fascicularis
ENSODEG00000018399-10097.826ENSMFAG00000045318CPSF610097.826Macaca_fascicularis
ENSODEG00000018399-10098.007ENSMMUG00000002921CPSF610098.007Macaca_mulatta
ENSODEG00000018399-6852.551ENSMMUG00000015280CPSF77757.386Macaca_mulatta
ENSODEG00000018399-10097.826ENSMNEG00000036311CPSF610097.826Macaca_nemestrina
ENSODEG00000018399-6852.551ENSMNEG00000029585CPSF77757.386Macaca_nemestrina
ENSODEG00000018399-6551.282ENSMLEG00000031269CPSF76957.386Mandrillus_leucophaeus
ENSODEG00000018399-9697.744ENSMLEG00000003957CPSF610097.744Mandrillus_leucophaeus
ENSODEG00000018399-5192.832ENSMGAG00000010552CPSF65096.970Meleagris_gallopavo
ENSODEG00000018399-6553.061ENSMAUG00000013020Cpsf77159.322Mesocricetus_auratus
ENSODEG00000018399-10097.826ENSMAUG00000013240Cpsf610097.826Mesocricetus_auratus
ENSODEG00000018399-6551.795ENSMICG00000013788CPSF77157.955Microcebus_murinus
ENSODEG00000018399-10098.007ENSMICG00000007385-10098.007Microcebus_murinus
ENSODEG00000018399-10098.007ENSMOCG00000013982Cpsf610098.007Microtus_ochrogaster
ENSODEG00000018399-6553.061ENSMOCG00000000072Cpsf77159.322Microtus_ochrogaster
ENSODEG00000018399-6552.792ENSMODG00000020364CPSF77256.497Monodelphis_domestica
ENSODEG00000018399-10097.101ENSMODG00000007123CPSF610097.101Monodelphis_domestica
ENSODEG00000018399-7588.144ENSMALG00000014908cpsf67888.268Monopterus_albus
ENSODEG00000018399-6553.061MGP_CAROLIEiJ_G0022690Cpsf77159.322Mus_caroli
ENSODEG00000018399-10098.007MGP_CAROLIEiJ_G0015834Cpsf610098.007Mus_caroli
ENSODEG00000018399-10097.645ENSMUSG00000055531Cpsf610097.645Mus_musculus
ENSODEG00000018399-6553.061ENSMUSG00000034820Cpsf77159.322Mus_musculus
ENSODEG00000018399-6553.061MGP_PahariEiJ_G0014184Cpsf77159.322Mus_pahari
ENSODEG00000018399-8198.416MGP_PahariEiJ_G0031253Cpsf68798.416Mus_pahari
ENSODEG00000018399-6553.061MGP_SPRETEiJ_G0023604Cpsf77159.322Mus_spretus
ENSODEG00000018399-10097.645MGP_SPRETEiJ_G0016657Cpsf610097.645Mus_spretus
ENSODEG00000018399-6152.041ENSMPUG00000014163CPSF76656.818Mustela_putorius_furo
ENSODEG00000018399-10093.297ENSMPUG00000017502CPSF610093.297Mustela_putorius_furo
ENSODEG00000018399-7392.340ENSMLUG00000028728-9393.981Myotis_lucifugus
ENSODEG00000018399-6853.061ENSMLUG00000013278CPSF77757.955Myotis_lucifugus
ENSODEG00000018399-9993.807ENSMLUG00000004172-10093.807Myotis_lucifugus
ENSODEG00000018399-10098.007ENSNGAG00000015901Cpsf610098.007Nannospalax_galili
ENSODEG00000018399-6553.061ENSNGAG00000005031Cpsf77157.955Nannospalax_galili
ENSODEG00000018399-6551.282ENSNLEG00000002529CPSF76557.386Nomascus_leucogenys
ENSODEG00000018399-10097.826ENSNLEG00000003798CPSF610097.826Nomascus_leucogenys
ENSODEG00000018399-6555.330ENSMEUG00000002261CPSF77159.195Notamacropus_eugenii
ENSODEG00000018399-9691.037ENSOPRG00000005199CPSF610091.037Ochotona_princeps
ENSODEG00000018399-9280.517ENSOANG00000005944CPSF65086.466Ornithorhynchus_anatinus
ENSODEG00000018399-9941.115ENSOCUG00000024726CPSF77157.386Oryctolagus_cuniculus
ENSODEG00000018399-10091.681ENSOCUG00000013505CPSF610091.681Oryctolagus_cuniculus
ENSODEG00000018399-6233.939ENSORLG00000006495CPSF75949.123Oryzias_latipes
ENSODEG00000018399-6233.939ENSORLG00020012657CPSF75949.123Oryzias_latipes_hni
ENSODEG00000018399-6233.939ENSORLG00015011091CPSF75949.123Oryzias_latipes_hsok
ENSODEG00000018399-5938.596ENSOMEG00000000539CPSF77941.463Oryzias_melastigma
ENSODEG00000018399-6551.795ENSOGAG00000027958CPSF76657.955Otolemur_garnettii
ENSODEG00000018399-9795.497ENSOGAG00000031988CPSF610095.497Otolemur_garnettii
ENSODEG00000018399-6552.041ENSOARG00000012937CPSF76557.386Ovis_aries
ENSODEG00000018399-9791.419ENSOARG00000020532CPSF610091.419Ovis_aries
ENSODEG00000018399-6552.551ENSPPAG00000028232CPSF77057.386Pan_paniscus
ENSODEG00000018399-10097.645ENSPPRG00000021620CPSF610097.645Panthera_pardus
ENSODEG00000018399-6553.061ENSPPRG00000008538CPSF77157.955Panthera_pardus
ENSODEG00000018399-9197.400ENSPTIG00000004079CPSF610097.400Panthera_tigris_altaica
ENSODEG00000018399-6551.795ENSPTIG00000021699CPSF77157.955Panthera_tigris_altaica
ENSODEG00000018399-6551.282ENSPTRG00000003742CPSF77157.386Pan_troglodytes
ENSODEG00000018399-10098.007ENSPTRG00000005205CPSF610098.007Pan_troglodytes
ENSODEG00000018399-10097.826ENSPANG00000011641CPSF610097.826Papio_anubis
ENSODEG00000018399-6551.282ENSPANG00000006037CPSF76957.386Papio_anubis
ENSODEG00000018399-6146.893ENSPKIG00000018054CPSF78044.681Paramormyrops_kingsleyae
ENSODEG00000018399-5181.979ENSPKIG00000003081-5182.686Paramormyrops_kingsleyae
ENSODEG00000018399-9697.744ENSPEMG00000007973Cpsf610097.744Peromyscus_maniculatus_bairdii
ENSODEG00000018399-6853.061ENSPEMG00000012648Cpsf77759.322Peromyscus_maniculatus_bairdii
ENSODEG00000018399-5042.123ENSPMAG00000008077-6850.794Petromyzon_marinus
ENSODEG00000018399-10097.101ENSPCIG00000019063CPSF610097.101Phascolarctos_cinereus
ENSODEG00000018399-6552.736ENSPCIG00000002551CPSF78455.435Phascolarctos_cinereus
ENSODEG00000018399-7882.759ENSPLAG00000005715cpsf65278.169Poecilia_latipinna
ENSODEG00000018399-5277.778ENSPMEG00000001353cpsf65278.169Poecilia_mexicana
ENSODEG00000018399-5277.778ENSPREG00000004417cpsf65278.169Poecilia_reticulata
ENSODEG00000018399-10097.645ENSPPYG00000004756CPSF610097.645Pongo_abelii
ENSODEG00000018399-6551.282ENSPPYG00000003188CPSF77157.386Pongo_abelii
ENSODEG00000018399-10091.681ENSPCAG00000011574CPSF610091.681Procavia_capensis
ENSODEG00000018399-10097.826ENSPCOG00000024384CPSF610097.826Propithecus_coquereli
ENSODEG00000018399-6551.795ENSPCOG00000011976CPSF77157.955Propithecus_coquereli
ENSODEG00000018399-6551.795ENSPVAG00000010675CPSF77157.955Pteropus_vampyrus
ENSODEG00000018399-5545.860ENSPNAG00000015073CPSF76946.667Pygocentrus_nattereri
ENSODEG00000018399-5179.225ENSPNAG00000024098CPSF65278.873Pygocentrus_nattereri
ENSODEG00000018399-8752.551ENSRNOG00000020668Cpsf77759.195Rattus_norvegicus
ENSODEG00000018399-10097.645ENSRNOG00000005927Cpsf610097.645Rattus_norvegicus
ENSODEG00000018399-10097.826ENSRBIG00000042827CPSF610097.826Rhinopithecus_bieti
ENSODEG00000018399-7750.273ENSRBIG00000031429CPSF79158.192Rhinopithecus_bieti
ENSODEG00000018399-10097.645ENSRROG00000042758CPSF610097.645Rhinopithecus_roxellana
ENSODEG00000018399-6452.551ENSRROG00000045009CPSF77157.386Rhinopithecus_roxellana
ENSODEG00000018399-9197.600ENSSBOG00000010652CPSF610097.600Saimiri_boliviensis_boliviensis
ENSODEG00000018399-6551.282ENSSBOG00000018431CPSF77157.386Saimiri_boliviensis_boliviensis
ENSODEG00000018399-6352.525ENSSHAG00000011964CPSF76959.770Sarcophilus_harrisii
ENSODEG00000018399-9582.824ENSSFOG00015015803CPSF69480.725Scleropages_formosus
ENSODEG00000018399-9578.817ENSSFOG00015001688CPSF68280.725Scleropages_formosus
ENSODEG00000018399-7642.180ENSSFOG00015010288cpsf77840.659Scleropages_formosus
ENSODEG00000018399-9496.537ENSSARG00000006743CPSF68896.537Sorex_araneus
ENSODEG00000018399-6553.125ENSSPUG00000019344CPSF77355.172Sphenodon_punctatus
ENSODEG00000018399-10090.909ENSSPUG00000001238CPSF610090.909Sphenodon_punctatus
ENSODEG00000018399-7750.820ENSSSCG00000013083CPSF78458.757Sus_scrofa
ENSODEG00000018399-10097.826ENSSSCG00000038031CPSF610097.826Sus_scrofa
ENSODEG00000018399-5558.779ENSTGUG00000006513CPSF77155.429Taeniopygia_guttata
ENSODEG00000018399-6152.551ENSTTRG00000011085CPSF77057.955Tursiops_truncatus
ENSODEG00000018399-9197.600ENSUAMG00000023492CPSF610097.600Ursus_americanus
ENSODEG00000018399-6551.795ENSUAMG00000017809CPSF77157.955Ursus_americanus
ENSODEG00000018399-7353.061ENSUMAG00000011825CPSF77757.955Ursus_maritimus
ENSODEG00000018399-9197.600ENSUMAG00000020779CPSF610097.600Ursus_maritimus
ENSODEG00000018399-9691.388ENSVPAG00000008469CPSF610091.388Vicugna_pacos
ENSODEG00000018399-9190.875ENSVVUG00000010156-10090.875Vulpes_vulpes
ENSODEG00000018399-7750.820ENSVVUG00000004939CPSF78458.757Vulpes_vulpes
ENSODEG00000018399-9741.499ENSXETG00000006715cpsf75444.633Xenopus_tropicalis
ENSODEG00000018399-5277.778ENSXCOG00000013423cpsf65278.169Xiphophorus_couchianus

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