EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSODEG00000018451 (Gene tree)
Gene ID: 101578550
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Minus strand
Length: 13072 bases
Position: chrJH651518.1:27424099-27437170
Accession: 101578550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025206	MBD	PF01429.19	5.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025485	MBD1-201	1683	XM_004623645	ENSODEP00000025206	560 (aa)	XP_004623704	UPI000C9F157E

Gene Model

Click here to download ENSODEG00000018451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018451	MBD1	97	82.440	ENSG00000141644	MBD1	99	82.440	Homo_sapiens
ENSODEG00000018451	MBD1	97	69.872	ENSAMEG00000000238	MBD1	95	67.943	Ailuropoda_melanoleuca
ENSODEG00000018451	MBD1	50	43.158	ENSACAG00000006091	-	65	43.561	Anolis_carolinensis
ENSODEG00000018451	MBD1	100	81.277	ENSANAG00000036253	MBD1	91	80.622	Aotus_nancymaae
ENSODEG00000018451	MBD1	100	70.124	ENSBTAG00000003801	MBD1	99	70.383	Bos_taurus
ENSODEG00000018451	MBD1	97	79.630	ENSCJAG00000004959	MBD1	99	66.719	Callithrix_jacchus
ENSODEG00000018451	MBD1	98	86.742	ENSCAFG00000018928	MBD1	81	86.486	Canis_familiaris
ENSODEG00000018451	MBD1	100	69.470	ENSCAFG00020024272	MBD1	100	67.907	Canis_lupus_dingo
ENSODEG00000018451	MBD1	97	72.027	ENSCHIG00000021134	MBD1	99	69.717	Capra_hircus
ENSODEG00000018451	MBD1	96	80.189	ENSTSYG00000000509	MBD1	99	75.088	Carlito_syrichta
ENSODEG00000018451	MBD1	100	84.286	ENSCAPG00000015782	MBD1	100	84.286	Cavia_aperea
ENSODEG00000018451	MBD1	100	71.515	ENSCPOG00000001671	MBD1	99	69.231	Cavia_porcellus
ENSODEG00000018451	MBD1	97	78.241	ENSCCAG00000034600	MBD1	99	75.972	Cebus_capucinus
ENSODEG00000018451	MBD1	97	78.975	ENSCATG00000029959	MBD1	99	78.092	Cercocebus_atys
ENSODEG00000018451	MBD1	97	77.280	ENSCLAG00000007457	MBD1	87	76.640	Chinchilla_lanigera
ENSODEG00000018451	MBD1	97	81.019	ENSCSAG00000018070	MBD1	93	81.019	Chlorocebus_sabaeus
ENSODEG00000018451	MBD1	97	82.255	ENSCANG00000033425	MBD1	99	82.255	Colobus_angolensis_palliatus
ENSODEG00000018451	MBD1	100	64.782	ENSCGRG00001014843	Mbd1	100	63.813	Cricetulus_griseus_chok1gshd
ENSODEG00000018451	MBD1	100	59.762	ENSCGRG00000014135	Mbd1	100	67.380	Cricetulus_griseus_crigri
ENSODEG00000018451	MBD1	100	71.733	ENSDNOG00000015998	MBD1	100	64.852	Dasypus_novemcinctus
ENSODEG00000018451	MBD1	100	78.788	ENSDORG00000013917	Mbd1	100	78.253	Dipodomys_ordii
ENSODEG00000018451	MBD1	98	80.944	ENSEASG00005003857	MBD1	92	80.944	Equus_asinus_asinus
ENSODEG00000018451	MBD1	100	71.028	ENSECAG00000011497	MBD1	79	72.910	Equus_caballus
ENSODEG00000018451	MBD1	97	76.232	ENSFCAG00000015730	MBD1	99	75.528	Felis_catus
ENSODEG00000018451	MBD1	98	87.545	ENSFDAG00000011085	MBD1	97	88.022	Fukomys_damarensis
ENSODEG00000018451	MBD1	88	36.567	ENSGAGG00000008206	-	50	45.848	Gopherus_agassizii
ENSODEG00000018451	MBD1	97	82.255	ENSGGOG00000016966	MBD1	99	82.255	Gorilla_gorilla
ENSODEG00000018451	MBD1	96	80.034	ENSHGLG00000008740	MBD1	98	80.034	Heterocephalus_glaber_female
ENSODEG00000018451	MBD1	96	83.452	ENSHGLG00100005198	MBD1	98	83.630	Heterocephalus_glaber_male
ENSODEG00000018451	MBD1	100	73.609	ENSSTOG00000007780	MBD1	100	73.927	Ictidomys_tridecemlineatus
ENSODEG00000018451	MBD1	100	79.218	ENSJJAG00000022859	Mbd1	100	79.041	Jaculus_jaculus
ENSODEG00000018451	MBD1	100	64.469	ENSLAFG00000031328	MBD1	100	63.781	Loxodonta_africana
ENSODEG00000018451	MBD1	97	78.975	ENSMFAG00000026335	MBD1	99	78.269	Macaca_fascicularis
ENSODEG00000018451	MBD1	98	75.592	ENSMMUG00000009050	MBD1	93	81.019	Macaca_mulatta
ENSODEG00000018451	MBD1	97	78.975	ENSMNEG00000038822	MBD1	99	78.269	Macaca_nemestrina
ENSODEG00000018451	MBD1	97	78.975	ENSMLEG00000043121	MBD1	99	78.092	Mandrillus_leucophaeus
ENSODEG00000018451	MBD1	97	79.855	ENSMICG00000006414	MBD1	99	81.670	Microcebus_murinus
ENSODEG00000018451	MBD1	50	73.145	ENSMOCG00000011976	-	92	76.834	Microtus_ochrogaster
ENSODEG00000018451	MBD1	100	65.313	ENSMUSG00000024561	Mbd1	100	65.313	Mus_musculus
ENSODEG00000018451	MBD1	100	66.099	MGP_PahariEiJ_G0019128	Mbd1	100	66.440	Mus_pahari
ENSODEG00000018451	MBD1	100	62.581	MGP_SPRETEiJ_G0023304	Mbd1	100	63.065	Mus_spretus
ENSODEG00000018451	MBD1	97	68.750	ENSMPUG00000008843	MBD1	95	66.773	Mustela_putorius_furo
ENSODEG00000018451	MBD1	97	75.926	ENSMLUG00000008286	MBD1	95	65.120	Myotis_lucifugus
ENSODEG00000018451	MBD1	100	77.138	ENSNGAG00000011412	Mbd1	100	76.963	Nannospalax_galili
ENSODEG00000018451	MBD1	96	74.212	ENSNLEG00000032711	-	91	72.212	Nomascus_leucogenys
ENSODEG00000018451	MBD1	97	82.070	ENSNLEG00000011661	-	99	82.070	Nomascus_leucogenys
ENSODEG00000018451	MBD1	97	59.000	ENSOPRG00000007647	MBD1	99	59.000	Ochotona_princeps
ENSODEG00000018451	MBD1	97	65.655	ENSOCUG00000006554	MBD1	99	66.077	Oryctolagus_cuniculus
ENSODEG00000018451	MBD1	97	69.778	ENSOGAG00000003784	MBD1	95	68.354	Otolemur_garnettii
ENSODEG00000018451	MBD1	97	68.590	ENSOARG00000004218	MBD1	94	65.710	Ovis_aries
ENSODEG00000018451	MBD1	97	81.019	ENSPPAG00000038886	MBD1	99	78.269	Pan_paniscus
ENSODEG00000018451	MBD1	97	76.408	ENSPPRG00000021387	MBD1	99	75.704	Panthera_pardus
ENSODEG00000018451	MBD1	97	76.585	ENSPTIG00000021231	MBD1	99	75.880	Panthera_tigris_altaica
ENSODEG00000018451	MBD1	97	81.019	ENSPTRG00000010021	MBD1	99	78.269	Pan_troglodytes
ENSODEG00000018451	MBD1	98	81.718	ENSPANG00000010867	MBD1	93	81.019	Papio_anubis
ENSODEG00000018451	MBD1	100	68.448	ENSPEMG00000022630	Mbd1	100	67.703	Peromyscus_maniculatus_bairdii
ENSODEG00000018451	MBD1	90	56.291	ENSPCIG00000027937	-	62	60.769	Phascolarctos_cinereus
ENSODEG00000018451	MBD1	97	80.556	ENSPPYG00000009158	MBD1	84	80.556	Pongo_abelii
ENSODEG00000018451	MBD1	97	63.545	ENSPCAG00000001648	MBD1	99	62.895	Procavia_capensis
ENSODEG00000018451	MBD1	97	83.948	ENSPCOG00000012450	MBD1	99	83.948	Propithecus_coquereli
ENSODEG00000018451	MBD1	100	54.795	ENSRNOG00000024104	Mbd1	100	58.997	Rattus_norvegicus
ENSODEG00000018451	MBD1	97	80.093	ENSRBIG00000041294	MBD1	93	80.093	Rhinopithecus_bieti
ENSODEG00000018451	MBD1	97	82.255	ENSRROG00000032517	MBD1	99	82.255	Rhinopithecus_roxellana
ENSODEG00000018451	MBD1	97	81.106	ENSSBOG00000027169	MBD1	99	77.739	Saimiri_boliviensis_boliviensis
ENSODEG00000018451	MBD1	72	37.149	ENSSHAG00000003661	-	70	45.455	Sarcophilus_harrisii
ENSODEG00000018451	MBD1	100	75.507	ENSSSCG00000004516	MBD1	89	86.851	Sus_scrofa
ENSODEG00000018451	MBD1	69	78.802	ENSTBEG00000012651	-	64	78.802	Tupaia_belangeri
ENSODEG00000018451	MBD1	97	78.632	ENSTTRG00000015523	MBD1	93	78.632	Tursiops_truncatus
ENSODEG00000018451	MBD1	93	79.870	ENSUAMG00000004752	MBD1	86	86.926	Ursus_americanus
ENSODEG00000018451	MBD1	92	80.130	ENSUMAG00000002947	MBD1	99	70.266	Ursus_maritimus