EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSODEG00000018540 (Gene tree)
Gene ID
101582202
Gene Symbol
-
Alias
-
Full Name
polyadenylate-binding protein 1-like 2
Gene Type
protein_coding
Species
Octodon_degus
Status
putative
Strand
Plus strand
Length
603 bases
Position
chrAJSA01251749.1:166-768
Accession
101582202
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSODEP00000025320RRM_1PF00076.222.4e-4212
ENSODEP00000025320RRM_1PF00076.222.4e-4222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSODET00000025605-603XM_004648790ENSODEP00000025320200 (aa)XP_004648847UPI000333825E
Gene Model
Click here to download ENSODEG00000018540's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018540's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSODEG00000018540-9730.303ENSODEG00000009409TIA18530.303
ENSODEG00000018540-7931.638ENSODEG00000017741TIAL17031.638
ENSODEG00000018540-7137.838ENSODEG00000019234-5637.838
ENSODEG00000018540-7675.497ENSODEG00000002920-9175.497
ENSODEG00000018540-9976.142ENSODEG00000006592-5976.142
ENSODEG00000018540-8532.895ENSODEG00000012189ELAVL19432.895
ENSODEG00000018540-9871.282ENSODEG00000013269-7669.444
ENSODEG00000018540-9968.528ENSODEG00000015482PABPC1L6868.528
ENSODEG00000018540-9876.398ENSODEG00000003229PABPC15376.398
ENSODEG00000018540-7066.429ENSODEG00000013457-10066.429
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSODEG00000018540-10097.500ENSG00000186288PABPC1L2A10097.500Homo_sapiens
ENSODEG00000018540-10097.500ENSG00000184388PABPC1L2B10097.500Homo_sapiens
ENSODEG00000018540-9879.592ENSAPOG00000015105pabpc1a5879.592Acanthochromis_polyacanthus
ENSODEG00000018540-9879.082ENSAPOG00000017776pabpc1b6079.082Acanthochromis_polyacanthus
ENSODEG00000018540-10097.000ENSAMEG00000019441-10097.000Ailuropoda_melanoleuca
ENSODEG00000018540-9878.061ENSACIG00000018366pabpc1b5978.061Amphilophus_citrinellus
ENSODEG00000018540-9879.592ENSACIG00000004685pabpc1a5879.592Amphilophus_citrinellus
ENSODEG00000018540-9879.592ENSAOCG00000011656pabpc1a5879.592Amphiprion_ocellaris
ENSODEG00000018540-9879.082ENSAOCG00000019839pabpc1b5879.082Amphiprion_ocellaris
ENSODEG00000018540-9879.592ENSAPEG00000006963pabpc1a5879.592Amphiprion_percula
ENSODEG00000018540-9879.082ENSAPEG00000010435pabpc1b5879.082Amphiprion_percula
ENSODEG00000018540-9878.571ENSATEG00000012917pabpc1b5878.571Anabas_testudineus
ENSODEG00000018540-9879.592ENSATEG00000024852pabpc1a5879.592Anabas_testudineus
ENSODEG00000018540-10097.500ENSANAG00000019429-10097.500Aotus_nancymaae
ENSODEG00000018540-10097.500ENSANAG00000019431-10097.500Aotus_nancymaae
ENSODEG00000018540-9879.592ENSACLG00000009399pabpc1a6878.333Astatotilapia_calliptera
ENSODEG00000018540-9877.551ENSACLG00000014335pabpc1b5877.551Astatotilapia_calliptera
ENSODEG00000018540-9879.082ENSAMXG00000008599pabpc1b5879.082Astyanax_mexicanus
ENSODEG00000018540-10096.000ENSBTAG00000050902-9596.000Bos_taurus
ENSODEG00000018540-10096.500ENSBTAG00000052491-9496.500Bos_taurus
ENSODEG00000018540-10097.500ENSCJAG00000041326-10097.500Callithrix_jacchus
ENSODEG00000018540-10097.000ENSCAFG00020002052-9697.000Canis_lupus_dingo
ENSODEG00000018540-10097.000ENSCHIG00000011138-10097.000Capra_hircus
ENSODEG00000018540-10096.500ENSCHIG00000006283-10096.500Capra_hircus
ENSODEG00000018540-10097.000ENSTSYG00000001775-10097.000Carlito_syrichta
ENSODEG00000018540-10097.500ENSCPOG00000009525-10097.500Cavia_porcellus
ENSODEG00000018540-10097.500ENSCCAG00000031524-10097.500Cebus_capucinus
ENSODEG00000018540-10097.500ENSCATG00000042826-10097.500Cercocebus_atys
ENSODEG00000018540-10097.500ENSCATG00000043125-10097.500Cercocebus_atys
ENSODEG00000018540-10096.000ENSCLAG00000017409-10096.000Chinchilla_lanigera
ENSODEG00000018540-10096.000ENSCLAG00000017412-10096.000Chinchilla_lanigera
ENSODEG00000018540-10097.500ENSCSAG00000000102-10097.500Chlorocebus_sabaeus
ENSODEG00000018540-9990.452ENSCGRG00001023387-9890.452Cricetulus_griseus_chok1gshd
ENSODEG00000018540-9879.592ENSCSEG00000013324pabpc1a5879.592Cynoglossus_semilaevis
ENSODEG00000018540-9878.571ENSCSEG00000015241-5878.571Cynoglossus_semilaevis
ENSODEG00000018540-9879.082ENSCVAG00000005489pabpc1b5879.082Cyprinodon_variegatus
ENSODEG00000018540-9879.592ENSCVAG00000021872pabpc1a5879.592Cyprinodon_variegatus
ENSODEG00000018540-9879.082ENSDARG00000017219pabpc1a5879.082Danio_rerio
ENSODEG00000018540-9878.571ENSDARG00000021140pabpc1b9186.777Danio_rerio
ENSODEG00000018540-10095.000ENSDNOG00000030926-10095.000Dasypus_novemcinctus
ENSODEG00000018540-10094.000ENSDORG00000011362-10094.000Dipodomys_ordii
ENSODEG00000018540-10096.500ENSEASG00005010399-9596.500Equus_asinus_asinus
ENSODEG00000018540-10096.500ENSECAG00000002620-9596.500Equus_caballus
ENSODEG00000018540-10092.000ENSEEUG00000008203-10092.000Erinaceus_europaeus
ENSODEG00000018540-9879.082ENSELUG00000003614pabpc1a6079.082Esox_lucius
ENSODEG00000018540-9356.684ENSELUG00000005389-7856.684Esox_lucius
ENSODEG00000018540-9879.592ENSELUG00000015062-5879.592Esox_lucius
ENSODEG00000018540-10097.000ENSFCAG00000039701-10097.000Felis_catus
ENSODEG00000018540-10097.500ENSFDAG00000005484-10097.500Fukomys_damarensis
ENSODEG00000018540-9879.592ENSFHEG00000018979pabpc1a5879.592Fundulus_heteroclitus
ENSODEG00000018540-9878.571ENSFHEG00000008186pabpc1b5878.571Fundulus_heteroclitus
ENSODEG00000018540-9879.082ENSGMOG00000002448-5779.082Gadus_morhua
ENSODEG00000018540-9879.082ENSGMOG00000013448pabpc1a5779.082Gadus_morhua
ENSODEG00000018540-9879.082ENSGAFG00000010193pabpc1b6079.082Gambusia_affinis
ENSODEG00000018540-9879.592ENSGAFG00000019750pabpc1a6179.592Gambusia_affinis
ENSODEG00000018540-9879.592ENSGACG00000003771pabpc1b6479.592Gasterosteus_aculeatus
ENSODEG00000018540-9879.592ENSGACG00000003572pabpc1a5879.592Gasterosteus_aculeatus
ENSODEG00000018540-10097.500ENSGGOG00000043933-10097.500Gorilla_gorilla
ENSODEG00000018540-10097.500ENSGGOG00000038606-10097.500Gorilla_gorilla
ENSODEG00000018540-9879.592ENSHBUG00000020487pabpc1a6878.333Haplochromis_burtoni
ENSODEG00000018540-9877.551ENSHBUG00000002075pabpc1b6077.551Haplochromis_burtoni
ENSODEG00000018540-10096.000ENSHGLG00000019762-10096.000Heterocephalus_glaber_female
ENSODEG00000018540-10096.000ENSHGLG00000019668-10096.000Heterocephalus_glaber_female
ENSODEG00000018540-10096.000ENSHGLG00100020854-10096.000Heterocephalus_glaber_male
ENSODEG00000018540-9568.254ENSHCOG00000003175pabpc1b6967.000Hippocampus_comes
ENSODEG00000018540-9879.592ENSHCOG00000013502pabpc1a5879.592Hippocampus_comes
ENSODEG00000018540-9858.763ENSIPUG00000021244-5258.763Ictalurus_punctatus
ENSODEG00000018540-9879.082ENSIPUG00000010791-6179.082Ictalurus_punctatus
ENSODEG00000018540-9879.082ENSIPUG00000008848pabpc1a5979.082Ictalurus_punctatus
ENSODEG00000018540-10096.000ENSSTOG00000022096-10096.000Ictidomys_tridecemlineatus
ENSODEG00000018540-10096.000ENSSTOG00000026028-10096.000Ictidomys_tridecemlineatus
ENSODEG00000018540-10095.000ENSJJAG00000007037-10095.000Jaculus_jaculus
ENSODEG00000018540-9878.571ENSKMAG00000008049pabpc1b6378.571Kryptolebias_marmoratus
ENSODEG00000018540-9879.592ENSKMAG00000000605pabpc1a5879.592Kryptolebias_marmoratus
ENSODEG00000018540-9879.592ENSLBEG00000024002-5879.592Labrus_bergylta
ENSODEG00000018540-9879.082ENSLBEG00000026845pabpc1b5879.082Labrus_bergylta
ENSODEG00000018540-9995.477ENSLAFG00000023096-9995.477Loxodonta_africana
ENSODEG00000018540-10097.015ENSMFAG00000028878-10097.015Macaca_fascicularis
ENSODEG00000018540-10097.500ENSMMUG00000039929-10097.500Macaca_mulatta
ENSODEG00000018540-10097.500ENSMMUG00000009740-10097.500Macaca_mulatta
ENSODEG00000018540-10097.500ENSMMUG00000037681-10097.500Macaca_mulatta
ENSODEG00000018540-10097.500ENSMNEG00000037732-10097.500Macaca_nemestrina
ENSODEG00000018540-10097.500ENSMLEG00000027495-10097.500Mandrillus_leucophaeus
ENSODEG00000018540-9878.571ENSMAMG00000014610pabpc1b5978.571Mastacembelus_armatus
ENSODEG00000018540-9879.592ENSMAMG00000004502-6878.333Mastacembelus_armatus
ENSODEG00000018540-9877.551ENSMZEG00005026745pabpc1b5877.551Maylandia_zebra
ENSODEG00000018540-9879.592ENSMZEG00005025416pabpc1a6878.333Maylandia_zebra
ENSODEG00000018540-10096.500ENSMICG00000047642-10096.500Microcebus_murinus
ENSODEG00000018540-9879.592ENSMMOG00000018044pabpc1a6878.333Mola_mola
ENSODEG00000018540-9879.082ENSMMOG00000018009pabpc1b6279.082Mola_mola
ENSODEG00000018540-9872.449ENSMODG00000013156-5872.449Monodelphis_domestica
ENSODEG00000018540-9866.667ENSMODG00000015024-5766.667Monodelphis_domestica
ENSODEG00000018540-9878.571ENSMALG00000006066pabpc1b6378.571Monopterus_albus
ENSODEG00000018540-9879.592ENSMALG00000013020-6279.592Monopterus_albus
ENSODEG00000018540-10094.500ENSNGAG00000012688-10094.500Nannospalax_galili
ENSODEG00000018540-9879.592ENSNBRG00000003068-6878.333Neolamprologus_brichardi
ENSODEG00000018540-9877.551ENSNBRG00000013737pabpc1b6277.551Neolamprologus_brichardi
ENSODEG00000018540-10097.500ENSNLEG00000018128-10097.500Nomascus_leucogenys
ENSODEG00000018540-9879.592ENSONIG00000006871-5879.592Oreochromis_niloticus
ENSODEG00000018540-9877.551ENSONIG00000002717pabpc1b5877.551Oreochromis_niloticus
ENSODEG00000018540-10097.000ENSOCUG00000002565-10097.000Oryctolagus_cuniculus
ENSODEG00000018540-9876.531ENSORLG00000003008-5876.531Oryzias_latipes
ENSODEG00000018540-9879.592ENSORLG00000002691pabpc1a6878.333Oryzias_latipes
ENSODEG00000018540-9876.531ENSORLG00020022259-5876.531Oryzias_latipes_hni
ENSODEG00000018540-9879.592ENSORLG00020022398pabpc1a5879.592Oryzias_latipes_hni
ENSODEG00000018540-9879.592ENSORLG00015013633pabpc15879.592Oryzias_latipes_hsok
ENSODEG00000018540-9876.531ENSORLG00015010932-5876.531Oryzias_latipes_hsok
ENSODEG00000018540-9879.592ENSOMEG00000020219pabpc1a5879.592Oryzias_melastigma
ENSODEG00000018540-9876.111ENSOMEG00000013627pabpc1b6776.111Oryzias_melastigma
ENSODEG00000018540-10096.500ENSOGAG00000026047-10096.500Otolemur_garnettii
ENSODEG00000018540-10096.500ENSOGAG00000029513-10096.500Otolemur_garnettii
ENSODEG00000018540-10096.500ENSOARG00000005943-10096.500Ovis_aries
ENSODEG00000018540-10097.500ENSPPAG00000012920-10097.500Pan_paniscus
ENSODEG00000018540-10097.000ENSPPRG00000011804-10097.000Panthera_pardus
ENSODEG00000018540-10097.000ENSPPRG00000011809-10097.000Panthera_pardus
ENSODEG00000018540-10097.500ENSPTRG00000028252-10097.500Pan_troglodytes
ENSODEG00000018540-10097.500ENSPANG00000011549-10097.500Papio_anubis
ENSODEG00000018540-9879.082ENSPKIG00000005676pabpc1b5879.082Paramormyrops_kingsleyae
ENSODEG00000018540-9878.571ENSPMGG00000023134-7978.571Periophthalmus_magnuspinnatus
ENSODEG00000018540-9878.571ENSPMGG00000022487pabpc1a7578.571Periophthalmus_magnuspinnatus
ENSODEG00000018540-9878.571ENSPFOG00000005917pabpc1b5878.571Poecilia_formosa
ENSODEG00000018540-9879.592ENSPFOG00000010815pabpc1a5779.592Poecilia_formosa
ENSODEG00000018540-9879.592ENSPLAG00000004114pabpc1a5879.592Poecilia_latipinna
ENSODEG00000018540-9879.082ENSPLAG00000001388pabpc1b5879.082Poecilia_latipinna
ENSODEG00000018540-9878.571ENSPMEG00000014399pabpc1b5878.571Poecilia_mexicana
ENSODEG00000018540-9879.592ENSPMEG00000001334pabpc1a5879.592Poecilia_mexicana
ENSODEG00000018540-9879.592ENSPREG00000019595pabpc1a9186.777Poecilia_reticulata
ENSODEG00000018540-9879.082ENSPREG00000010911pabpc1b6079.082Poecilia_reticulata
ENSODEG00000018540-10097.500ENSPPYG00000020468-10097.500Pongo_abelii
ENSODEG00000018540-10096.000ENSPCAG00000005308-10096.000Procavia_capensis
ENSODEG00000018540-10096.000ENSPCOG00000026349-10096.000Propithecus_coquereli
ENSODEG00000018540-10093.500ENSPVAG00000016117-10093.500Pteropus_vampyrus
ENSODEG00000018540-9877.551ENSPNYG00000012578pabpc1b6077.551Pundamilia_nyererei
ENSODEG00000018540-9879.592ENSPNYG00000005192pabpc1a6178.333Pundamilia_nyererei
ENSODEG00000018540-9879.592ENSPNAG00000024626pabpc1b5879.592Pygocentrus_nattereri
ENSODEG00000018540-9878.061ENSPNAG00000028408pabpc1a6478.061Pygocentrus_nattereri
ENSODEG00000018540-10097.500ENSRBIG00000027173-10097.500Rhinopithecus_bieti
ENSODEG00000018540-9878.571ENSRBIG00000028738-6978.571Rhinopithecus_bieti
ENSODEG00000018540-10097.500ENSRROG00000017404-10097.500Rhinopithecus_roxellana
ENSODEG00000018540-9869.388ENSSHAG00000000511-5969.388Sarcophilus_harrisii
ENSODEG00000018540-9879.592ENSSFOG00015006662pabpc1a5879.592Scleropages_formosus
ENSODEG00000018540-9879.592ENSSFOG00015002752-5879.592Scleropages_formosus
ENSODEG00000018540-8769.540ENSSFOG00015019668-6769.540Scleropages_formosus
ENSODEG00000018540-9879.592ENSSMAG00000010803pabpc1a5879.592Scophthalmus_maximus
ENSODEG00000018540-9878.571ENSSMAG00000006869pabpc1b5878.571Scophthalmus_maximus
ENSODEG00000018540-9879.592ENSSDUG00000006675pabpc1a5879.592Seriola_dumerili
ENSODEG00000018540-9879.082ENSSDUG00000011965pabpc1b5879.082Seriola_dumerili
ENSODEG00000018540-9879.082ENSSLDG00000014156pabpc1b5879.082Seriola_lalandi_dorsalis
ENSODEG00000018540-9879.592ENSSLDG00000011661pabpc1a5879.592Seriola_lalandi_dorsalis
ENSODEG00000018540-9879.592ENSSPAG00000014453-5879.592Stegastes_partitus
ENSODEG00000018540-9879.082ENSSPAG00000019265pabpc1b6379.082Stegastes_partitus
ENSODEG00000018540-10097.000ENSSSCG00000036336-10097.000Sus_scrofa
ENSODEG00000018540-10097.000ENSSSCG00000032167-10097.000Sus_scrofa
ENSODEG00000018540-9879.592ENSTRUG00000011577-5879.592Takifugu_rubripes
ENSODEG00000018540-9879.592ENSTRUG00000003767-5979.592Takifugu_rubripes
ENSODEG00000018540-9875.248ENSTNIG00000013307pabpc1a5875.248Tetraodon_nigroviridis
ENSODEG00000018540-9880.102ENSTNIG00000009153pabpc1b5880.102Tetraodon_nigroviridis
ENSODEG00000018540-10097.000ENSTTRG00000013181-10097.000Tursiops_truncatus
ENSODEG00000018540-10097.000ENSUAMG00000008089-10097.000Ursus_americanus
ENSODEG00000018540-10097.000ENSUMAG00000003364-10097.000Ursus_maritimus
ENSODEG00000018540-10058.163ENSUMAG00000023926-8857.653Ursus_maritimus
ENSODEG00000018540-10097.500ENSVVUG00000015892-9797.500Vulpes_vulpes
ENSODEG00000018540-9879.082ENSXCOG00000019901pabpc1b6079.082Xiphophorus_couchianus
ENSODEG00000018540-9879.592ENSXCOG00000017066pabpc1a6179.592Xiphophorus_couchianus
ENSODEG00000018540-9879.082ENSXMAG00000003753pabpc1b8979.082Xiphophorus_maculatus
ENSODEG00000018540-9879.592ENSXMAG00000002555pabpc1a6079.592Xiphophorus_maculatus

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