EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSODEG00000018684 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Octodon_degus
Status: putative
Strand: Plus strand
Length: 234 bases
Position: chrJH651760.1:421602-421835
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSODEP00000025437	LSM	PF01423.22	2.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSODET00000025749	-	234	-	ENSODEP00000025437	77 (aa)	-	-

Gene Model

Click here to download ENSODEG00000018684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSODEG00000018684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSODEG00000018684	-	100	87.013	ENSODEG00000002307	-	96	87.013
ENSODEG00000018684	-	100	85.714	ENSODEG00000020420	-	96	85.714
ENSODEG00000018684	-	99	86.842	ENSODEG00000019419	-	95	86.842
ENSODEG00000018684	-	86	50.000	ENSODEG00000010328	-	78	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSODEG00000018684	-	100	88.312	ENSG00000164167	LSM6	96	88.312	Homo_sapiens
ENSODEG00000018684	-	100	85.714	ENSAPOG00000019832	lsm6	96	85.714	Acanthochromis_polyacanthus
ENSODEG00000018684	-	100	88.312	ENSAMEG00000016671	LSM6	96	88.312	Ailuropoda_melanoleuca
ENSODEG00000018684	-	100	85.714	ENSACIG00000016711	lsm6	96	85.714	Amphilophus_citrinellus
ENSODEG00000018684	-	100	85.714	ENSAOCG00000002110	lsm6	50	85.714	Amphiprion_ocellaris
ENSODEG00000018684	-	100	85.714	ENSAPEG00000023992	lsm6	96	85.714	Amphiprion_percula
ENSODEG00000018684	-	100	85.714	ENSATEG00000012610	lsm6	96	85.714	Anabas_testudineus
ENSODEG00000018684	-	96	87.838	ENSAPLG00000012594	LSM6	95	87.838	Anas_platyrhynchos
ENSODEG00000018684	-	100	88.312	ENSACAG00000004004	LSM6	96	88.312	Anolis_carolinensis
ENSODEG00000018684	-	100	79.221	ENSANAG00000021839	-	96	79.221	Aotus_nancymaae
ENSODEG00000018684	-	100	88.312	ENSANAG00000030568	-	96	88.312	Aotus_nancymaae
ENSODEG00000018684	-	100	85.714	ENSACLG00000025621	lsm6	96	85.714	Astatotilapia_calliptera
ENSODEG00000018684	-	100	85.714	ENSAMXG00000038738	lsm6	96	85.714	Astyanax_mexicanus
ENSODEG00000018684	-	100	88.312	ENSBTAG00000014060	LSM6	96	88.312	Bos_taurus
ENSODEG00000018684	-	100	89.610	ENSBTAG00000052085	-	96	89.610	Bos_taurus
ENSODEG00000018684	-	94	75.000	WBGene00003080	lsm-6	94	75.000	Caenorhabditis_elegans
ENSODEG00000018684	-	100	88.312	ENSCJAG00000002482	LSM6	96	88.312	Callithrix_jacchus
ENSODEG00000018684	-	100	88.312	ENSCAFG00000007738	LSM6	96	88.312	Canis_familiaris
ENSODEG00000018684	-	100	88.312	ENSCAFG00020025902	LSM6	96	88.312	Canis_lupus_dingo
ENSODEG00000018684	-	92	88.732	ENSCHIG00000012864	-	100	88.732	Capra_hircus
ENSODEG00000018684	-	100	72.727	ENSCHIG00000024198	-	91	72.727	Capra_hircus
ENSODEG00000018684	-	100	88.312	ENSCHIG00000010334	-	96	88.312	Capra_hircus
ENSODEG00000018684	-	83	81.250	ENSTSYG00000012759	-	84	81.250	Carlito_syrichta
ENSODEG00000018684	-	100	88.312	ENSTSYG00000026972	LSM6	96	88.312	Carlito_syrichta
ENSODEG00000018684	-	100	88.312	ENSCAPG00000008104	LSM6	96	88.312	Cavia_aperea
ENSODEG00000018684	-	84	86.154	ENSCAPG00000011179	-	100	86.154	Cavia_aperea
ENSODEG00000018684	-	100	88.312	ENSCPOG00000032655	LSM6	96	88.312	Cavia_porcellus
ENSODEG00000018684	-	100	88.312	ENSCCAG00000036437	LSM6	96	88.312	Cebus_capucinus
ENSODEG00000018684	-	100	87.013	ENSCCAG00000020665	-	96	87.013	Cebus_capucinus
ENSODEG00000018684	-	100	88.312	ENSCATG00000002770	-	96	88.312	Cercocebus_atys
ENSODEG00000018684	-	99	65.789	ENSCATG00000038799	-	94	65.789	Cercocebus_atys
ENSODEG00000018684	-	100	88.312	ENSCLAG00000005495	LSM6	96	88.312	Chinchilla_lanigera
ENSODEG00000018684	-	92	76.056	ENSCLAG00000005685	-	100	76.056	Chinchilla_lanigera
ENSODEG00000018684	-	100	88.312	ENSCSAG00000003421	LSM6	96	88.312	Chlorocebus_sabaeus
ENSODEG00000018684	-	77	81.356	ENSCHOG00000003420	LSM6	94	81.356	Choloepus_hoffmanni
ENSODEG00000018684	-	100	88.312	ENSCPBG00000027472	LSM6	81	88.312	Chrysemys_picta_bellii
ENSODEG00000018684	-	96	85.135	ENSCING00000019152	-	90	85.135	Ciona_intestinalis
ENSODEG00000018684	-	96	86.486	ENSCSAVG00000002065	-	90	86.486	Ciona_savignyi
ENSODEG00000018684	-	79	72.131	ENSCANG00000035214	-	80	72.131	Colobus_angolensis_palliatus
ENSODEG00000018684	-	100	88.312	ENSCANG00000041263	-	96	88.312	Colobus_angolensis_palliatus
ENSODEG00000018684	-	100	88.312	ENSCANG00000006849	-	96	88.312	Colobus_angolensis_palliatus
ENSODEG00000018684	-	100	88.312	ENSCGRG00001017142	Lsm6	96	88.312	Cricetulus_griseus_chok1gshd
ENSODEG00000018684	-	100	88.312	ENSCGRG00000008320	Lsm6	96	88.312	Cricetulus_griseus_crigri
ENSODEG00000018684	-	100	85.714	ENSCSEG00000000423	lsm6	96	85.714	Cynoglossus_semilaevis
ENSODEG00000018684	-	100	85.714	ENSCVAG00000001592	lsm6	96	85.714	Cyprinodon_variegatus
ENSODEG00000018684	-	100	85.714	ENSDARG00000036995	lsm6	96	85.714	Danio_rerio
ENSODEG00000018684	-	90	88.406	ENSDNOG00000040186	-	74	88.406	Dasypus_novemcinctus
ENSODEG00000018684	-	100	87.013	ENSDNOG00000044848	-	96	87.013	Dasypus_novemcinctus
ENSODEG00000018684	-	100	88.312	ENSDORG00000000933	Lsm6	96	88.312	Dipodomys_ordii
ENSODEG00000018684	-	96	78.378	FBgn0034564	CG9344	94	78.378	Drosophila_melanogaster
ENSODEG00000018684	-	58	91.111	ENSETEG00000013098	LSM6	94	91.111	Echinops_telfairi
ENSODEG00000018684	-	100	88.312	ENSEBUG00000017073	lsm6	96	88.312	Eptatretus_burgeri
ENSODEG00000018684	-	90	88.406	ENSEASG00005001533	LSM6	72	88.406	Equus_asinus_asinus
ENSODEG00000018684	-	100	88.312	ENSECAG00000021036	LSM6	96	88.312	Equus_caballus
ENSODEG00000018684	-	99	64.474	ENSEEUG00000002101	LSM6	96	64.474	Erinaceus_europaeus
ENSODEG00000018684	-	100	85.714	ENSELUG00000014301	LSM6	96	85.714	Esox_lucius
ENSODEG00000018684	-	100	88.312	ENSFCAG00000003047	LSM6	96	88.312	Felis_catus
ENSODEG00000018684	-	100	88.312	ENSFALG00000005509	LSM6	89	88.312	Ficedula_albicollis
ENSODEG00000018684	-	100	88.312	ENSFDAG00000020913	-	96	88.312	Fukomys_damarensis
ENSODEG00000018684	-	100	84.416	ENSFDAG00000019073	-	96	84.416	Fukomys_damarensis
ENSODEG00000018684	-	100	85.714	ENSFHEG00000007948	lsm6	96	85.714	Fundulus_heteroclitus
ENSODEG00000018684	-	100	85.714	ENSGMOG00000015550	lsm6	96	85.714	Gadus_morhua
ENSODEG00000018684	-	100	88.312	ENSGALG00000009985	LSM6	96	88.312	Gallus_gallus
ENSODEG00000018684	-	100	85.714	ENSGAFG00000017763	lsm6	96	85.714	Gambusia_affinis
ENSODEG00000018684	-	100	85.714	ENSGACG00000017223	lsm6	96	85.714	Gasterosteus_aculeatus
ENSODEG00000018684	-	100	88.312	ENSGAGG00000020980	LSM6	96	88.312	Gopherus_agassizii
ENSODEG00000018684	-	100	88.312	ENSGGOG00000001310	LSM6	96	88.312	Gorilla_gorilla
ENSODEG00000018684	-	100	85.714	ENSHBUG00000008618	lsm6	96	85.714	Haplochromis_burtoni
ENSODEG00000018684	-	100	88.312	ENSHGLG00000000205	LSM6	96	88.312	Heterocephalus_glaber_female
ENSODEG00000018684	-	100	88.312	ENSHGLG00100014341	LSM6	96	88.312	Heterocephalus_glaber_male
ENSODEG00000018684	-	100	85.714	ENSHCOG00000005591	lsm6	96	85.714	Hippocampus_comes
ENSODEG00000018684	-	100	84.416	ENSIPUG00000004508	lsm6	96	84.416	Ictalurus_punctatus
ENSODEG00000018684	-	100	88.312	ENSSTOG00000002678	LSM6	96	88.312	Ictidomys_tridecemlineatus
ENSODEG00000018684	-	100	88.312	ENSJJAG00000013845	-	96	88.312	Jaculus_jaculus
ENSODEG00000018684	-	100	80.519	ENSJJAG00000011211	-	96	80.519	Jaculus_jaculus
ENSODEG00000018684	-	96	72.973	ENSJJAG00000016942	-	93	72.973	Jaculus_jaculus
ENSODEG00000018684	-	100	85.714	ENSKMAG00000004105	lsm6	96	85.714	Kryptolebias_marmoratus
ENSODEG00000018684	-	100	85.714	ENSLBEG00000018441	lsm6	96	85.714	Labrus_bergylta
ENSODEG00000018684	-	100	88.312	ENSLACG00000006937	LSM6	96	88.312	Latimeria_chalumnae
ENSODEG00000018684	-	100	85.714	ENSLOCG00000008852	lsm6	96	85.714	Lepisosteus_oculatus
ENSODEG00000018684	-	100	84.416	ENSLOCG00000017683	-	96	84.416	Lepisosteus_oculatus
ENSODEG00000018684	-	100	88.312	ENSLAFG00000001952	LSM6	96	88.312	Loxodonta_africana
ENSODEG00000018684	-	100	88.312	ENSMFAG00000033073	LSM6	96	88.312	Macaca_fascicularis
ENSODEG00000018684	-	100	88.312	ENSMNEG00000034820	-	96	88.312	Macaca_nemestrina
ENSODEG00000018684	-	97	66.667	ENSMNEG00000040412	-	93	66.667	Macaca_nemestrina
ENSODEG00000018684	-	100	88.312	ENSMLEG00000035153	LSM6	96	88.312	Mandrillus_leucophaeus
ENSODEG00000018684	-	100	85.714	ENSMAMG00000014029	lsm6	96	85.714	Mastacembelus_armatus
ENSODEG00000018684	-	100	85.714	ENSMZEG00005009146	lsm6	96	85.714	Maylandia_zebra
ENSODEG00000018684	-	100	88.312	ENSMGAG00000003802	LSM6	96	88.312	Meleagris_gallopavo
ENSODEG00000018684	-	100	88.312	ENSMAUG00000014938	Lsm6	96	88.312	Mesocricetus_auratus
ENSODEG00000018684	-	100	88.312	ENSMICG00000042599	LSM6	96	88.312	Microcebus_murinus
ENSODEG00000018684	-	100	84.416	ENSMICG00000047411	-	91	84.416	Microcebus_murinus
ENSODEG00000018684	-	100	88.312	ENSMOCG00000020049	Lsm6	96	88.312	Microtus_ochrogaster
ENSODEG00000018684	-	100	76.623	ENSMMOG00000007379	-	97	76.623	Mola_mola
ENSODEG00000018684	-	100	85.714	ENSMMOG00000005470	lsm6	96	85.714	Mola_mola
ENSODEG00000018684	-	100	88.312	ENSMODG00000000526	LSM6	96	88.312	Monodelphis_domestica
ENSODEG00000018684	-	100	85.714	ENSMALG00000002419	lsm6	96	85.714	Monopterus_albus
ENSODEG00000018684	-	100	88.312	MGP_CAROLIEiJ_G0031245	Lsm6	96	88.312	Mus_caroli
ENSODEG00000018684	-	100	88.312	ENSMUSG00000031683	Lsm6	96	88.312	Mus_musculus
ENSODEG00000018684	-	100	88.312	MGP_PahariEiJ_G0022851	Lsm6	96	88.312	Mus_pahari
ENSODEG00000018684	-	100	88.312	MGP_SPRETEiJ_G0032365	Lsm6	96	88.312	Mus_spretus
ENSODEG00000018684	-	100	88.312	ENSMPUG00000006936	LSM6	90	88.312	Mustela_putorius_furo
ENSODEG00000018684	-	100	88.312	ENSMLUG00000026355	LSM6	96	88.312	Myotis_lucifugus
ENSODEG00000018684	-	100	88.312	ENSNGAG00000019116	Lsm6	96	88.312	Nannospalax_galili
ENSODEG00000018684	-	100	85.714	ENSNBRG00000004887	lsm6	96	85.714	Neolamprologus_brichardi
ENSODEG00000018684	-	100	88.312	ENSNLEG00000005584	LSM6	96	88.312	Nomascus_leucogenys
ENSODEG00000018684	-	100	87.013	ENSOPRG00000011199	LSM6	96	87.013	Ochotona_princeps
ENSODEG00000018684	-	100	85.714	ENSONIG00000010005	lsm6	96	85.714	Oreochromis_niloticus
ENSODEG00000018684	-	97	66.667	ENSOANG00000006894	-	96	66.667	Ornithorhynchus_anatinus
ENSODEG00000018684	-	97	66.667	ENSOANG00000006895	-	96	66.667	Ornithorhynchus_anatinus
ENSODEG00000018684	-	100	84.416	ENSORLG00000024158	lsm6	96	84.416	Oryzias_latipes
ENSODEG00000018684	-	100	84.416	ENSORLG00020017383	lsm6	96	84.416	Oryzias_latipes_hni
ENSODEG00000018684	-	100	84.416	ENSORLG00015016903	lsm6	96	84.416	Oryzias_latipes_hsok
ENSODEG00000018684	-	100	85.714	ENSOMEG00000000074	lsm6	96	85.714	Oryzias_melastigma
ENSODEG00000018684	-	100	88.312	ENSOGAG00000033153	-	96	88.312	Otolemur_garnettii
ENSODEG00000018684	-	100	88.312	ENSOGAG00000026665	-	96	88.312	Otolemur_garnettii
ENSODEG00000018684	-	90	88.406	ENSOARG00000008509	-	88	88.406	Ovis_aries
ENSODEG00000018684	-	100	84.416	ENSOARG00000011641	-	90	84.416	Ovis_aries
ENSODEG00000018684	-	100	88.312	ENSPPAG00000037929	LSM6	96	88.312	Pan_paniscus
ENSODEG00000018684	-	100	88.312	ENSPPRG00000012806	LSM6	96	88.312	Panthera_pardus
ENSODEG00000018684	-	100	88.312	ENSPTIG00000019769	LSM6	96	88.312	Panthera_tigris_altaica
ENSODEG00000018684	-	100	88.312	ENSPTRG00000016488	LSM6	96	88.312	Pan_troglodytes
ENSODEG00000018684	-	100	88.312	ENSPANG00000006552	LSM6	96	88.312	Papio_anubis
ENSODEG00000018684	-	100	85.714	ENSPKIG00000016176	lsm6	96	85.714	Paramormyrops_kingsleyae
ENSODEG00000018684	-	100	88.312	ENSPSIG00000016942	LSM6	96	88.312	Pelodiscus_sinensis
ENSODEG00000018684	-	100	85.714	ENSPMGG00000018004	lsm6	96	85.714	Periophthalmus_magnuspinnatus
ENSODEG00000018684	-	100	88.312	ENSPEMG00000012410	Lsm6	96	88.312	Peromyscus_maniculatus_bairdii
ENSODEG00000018684	-	100	88.312	ENSPMAG00000006949	lsm6	96	88.312	Petromyzon_marinus
ENSODEG00000018684	-	100	88.312	ENSPCIG00000023469	LSM6	80	88.406	Phascolarctos_cinereus
ENSODEG00000018684	-	100	85.714	ENSPFOG00000008881	lsm6	96	85.714	Poecilia_formosa
ENSODEG00000018684	-	100	85.714	ENSPLAG00000003202	lsm6	96	85.714	Poecilia_latipinna
ENSODEG00000018684	-	100	85.714	ENSPMEG00000004000	lsm6	96	85.714	Poecilia_mexicana
ENSODEG00000018684	-	100	85.714	ENSPREG00000023235	lsm6	96	85.714	Poecilia_reticulata
ENSODEG00000018684	-	100	88.312	ENSPPYG00000015105	LSM6	96	88.312	Pongo_abelii
ENSODEG00000018684	-	100	88.312	ENSPCOG00000013899	LSM6	96	88.312	Propithecus_coquereli
ENSODEG00000018684	-	100	85.714	ENSPNYG00000012614	lsm6	96	85.714	Pundamilia_nyererei
ENSODEG00000018684	-	100	85.714	ENSPNAG00000018779	lsm6	96	85.714	Pygocentrus_nattereri
ENSODEG00000018684	-	100	88.312	ENSRNOG00000030374	Lsm6	96	88.312	Rattus_norvegicus
ENSODEG00000018684	-	100	88.312	ENSRNOG00000049370	LOC100360750	96	88.312	Rattus_norvegicus
ENSODEG00000018684	-	100	88.312	ENSRBIG00000027878	LSM6	96	88.312	Rhinopithecus_bieti
ENSODEG00000018684	-	100	88.312	ENSRROG00000024868	LSM6	96	88.312	Rhinopithecus_roxellana
ENSODEG00000018684	-	99	38.750	YDR378C	-	93	38.750	Saccharomyces_cerevisiae
ENSODEG00000018684	-	100	88.312	ENSSBOG00000021229	-	96	88.312	Saimiri_boliviensis_boliviensis
ENSODEG00000018684	-	100	66.234	ENSSBOG00000028103	-	96	66.234	Saimiri_boliviensis_boliviensis
ENSODEG00000018684	-	100	85.714	ENSSFOG00015016480	lsm6	96	85.714	Scleropages_formosus
ENSODEG00000018684	-	100	85.714	ENSSMAG00000004550	lsm6	96	85.714	Scophthalmus_maximus
ENSODEG00000018684	-	100	85.714	ENSSLDG00000020533	lsm6	80	85.714	Seriola_lalandi_dorsalis
ENSODEG00000018684	-	90	85.507	ENSSLDG00000004136	-	59	85.507	Seriola_lalandi_dorsalis
ENSODEG00000018684	-	58	91.111	ENSSARG00000000689	LSM6	94	91.111	Sorex_araneus
ENSODEG00000018684	-	100	88.312	ENSSPUG00000008657	LSM6	96	88.312	Sphenodon_punctatus
ENSODEG00000018684	-	100	85.714	ENSSPAG00000003246	lsm6	96	85.714	Stegastes_partitus
ENSODEG00000018684	-	100	88.312	ENSSSCG00000035973	LSM6	96	88.312	Sus_scrofa
ENSODEG00000018684	-	100	88.312	ENSTGUG00000002663	LSM6	96	88.312	Taeniopygia_guttata
ENSODEG00000018684	-	100	85.714	ENSTRUG00000023398	lsm6	96	85.714	Takifugu_rubripes
ENSODEG00000018684	-	100	85.714	ENSTNIG00000017725	lsm6	96	85.714	Tetraodon_nigroviridis
ENSODEG00000018684	-	100	88.312	ENSTTRG00000004609	LSM6	96	88.312	Tursiops_truncatus
ENSODEG00000018684	-	99	80.769	ENSUAMG00000014213	LSM6	64	80.769	Ursus_americanus
ENSODEG00000018684	-	99	80.769	ENSUMAG00000015727	LSM6	64	80.769	Ursus_maritimus
ENSODEG00000018684	-	100	88.312	ENSVPAG00000006922	LSM6	96	88.312	Vicugna_pacos
ENSODEG00000018684	-	100	88.312	ENSVVUG00000009254	LSM6	66	88.312	Vulpes_vulpes
ENSODEG00000018684	-	100	88.312	ENSXETG00000023683	lsm6	96	88.312	Xenopus_tropicalis
ENSODEG00000018684	-	100	85.714	ENSXMAG00000009606	lsm6	96	85.714	Xiphophorus_maculatus